RNA–Protein interactions for RNA: ENST00000561960.5

NSMCE1-202, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-202ENST00000561960 PPP1R3GB7ZBB8 358 aa11.9□□□□□ -0.5
NSMCE1-202ENST00000561960 H3BM21 787 aa11.9□□□□□ -0.5
NSMCE1-202ENST00000561960 GOLGA8SH3BPF8 625 aa11.9□□□□□ -0.5
NSMCE1-202ENST00000561960 NEMP1O14524 444 aa11.9□□□□□ -0.5
NSMCE1-202ENST00000561960 HSF2BPO75031 334 aa11.9□□□□□ -0.5
NSMCE1-202ENST00000561960 DAB1O75553 588 aa11.9□□□□□ -0.5
NSMCE1-202ENST00000561960 SMC2O95347 1197 aa11.9□□□□□ -0.5
NSMCE1-202ENST00000561960 PRNPP04156 253 aa11.9□□□□□ -0.5
NSMCE1-202ENST00000561960 GP1BAP07359 652 aa11.9□□□□□ -0.5
NSMCE1-202ENST00000561960 SLC2A3P11169 496 aa11.9□□□□□ -0.5
NSMCE1-202ENST00000561960 OR1E1P30953 314 aa11.9□□□□□ -0.5
NSMCE1-202ENST00000561960 IGFALSP35858 605 aa11.9□□□□□ -0.5
NSMCE1-202ENST00000561960 ACVRL1P37023 503 aa11.9□□□□□ -0.5
NSMCE1-202ENST00000561960 RECQLP46063 649 aaPredicted RBP11.9□□□□□ -0.5
NSMCE1-202ENST00000561960 RPS21P63220 83 aaKnown RBP11.9□□□□□ -0.5
NSMCE1-202ENST00000561960 ARF5P84085 180 aa11.9□□□□□ -0.5
NSMCE1-202ENST00000561960 CETN1Q12798 172 aa11.9□□□□□ -0.5
NSMCE1-202ENST00000561960 LINC00303Q3SY05 128 aa11.9□□□□□ -0.5
NSMCE1-202ENST00000561960 SDK2Q58EX2 2172 aa11.9□□□□□ -0.5
NSMCE1-202ENST00000561960 COLEC12Q5KU26 742 aa11.9□□□□□ -0.5
NSMCE1-202ENST00000561960 KCTD16Q68DU8 428 aa11.9□□□□□ -0.5
NSMCE1-202ENST00000561960 RD3Q7Z3Z2 195 aa11.9□□□□□ -0.5
NSMCE1-202ENST00000561960 TRIM59Q8IWR1 403 aa11.9□□□□□ -0.5
NSMCE1-202ENST00000561960 ZNF683Q8IZ20 524 aa11.9□□□□□ -0.5
NSMCE1-202ENST00000561960 Q8N9G6 341 aaPredicted RBP11.9□□□□□ -0.5
NSMCE1-202ENST00000561960 KYQ8NBH2 561 aa11.9□□□□□ -0.5
NSMCE1-202ENST00000561960 TMIEQ8NEW7 156 aa11.9□□□□□ -0.5
NSMCE1-202ENST00000561960 CCDC114Q96M63 670 aa11.9□□□□□ -0.5
NSMCE1-202ENST00000561960 GSDMAQ96QA5 445 aa11.9□□□□□ -0.5
NSMCE1-202ENST00000561960 KLF6Q99612 283 aaPredicted RBP11.9□□□□□ -0.5
NSMCE1-202ENST00000561960 C2orf49Q9BVC5 232 aaPredicted RBP11.9□□□□□ -0.5
NSMCE1-202ENST00000561960 TRIM62Q9BVG3 475 aa11.9□□□□□ -0.5
NSMCE1-202ENST00000561960 HDAC8Q9BY41 377 aa11.9□□□□□ -0.5
NSMCE1-202ENST00000561960 FAM117AQ9C073 453 aa11.9□□□□□ -0.5
NSMCE1-202ENST00000561960 WDCPQ9H6R7 721 aa11.9□□□□□ -0.5
NSMCE1-202ENST00000561960 ATP13A1Q9HD20 1204 aa11.9□□□□□ -0.5
NSMCE1-202ENST00000561960 NDFIP2Q9NV92 336 aa11.9□□□□□ -0.5
NSMCE1-202ENST00000561960 ATXN7L1Q9ULK2 861 aaPredicted RBP11.9□□□□□ -0.5
NSMCE1-202ENST00000561960 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.9□□□□□ -0.5
NSMCE1-202ENST00000561960 HEMK1Q9Y5R4 338 aaPredicted RBP11.9□□□□□ -0.5
NSMCE1-202ENST00000561960 CDRT15L2A8MXV6 281 aa11.89□□□□□ -0.51
NSMCE1-202ENST00000561960 KRIT1O00522 736 aa11.89□□□□□ -0.51
NSMCE1-202ENST00000561960 FPGTO14772 594 aa11.89□□□□□ -0.51
NSMCE1-202ENST00000561960 MMP20O60882 483 aa11.89□□□□□ -0.51
NSMCE1-202ENST00000561960 UGT2B4P06133 528 aa11.89□□□□□ -0.51
NSMCE1-202ENST00000561960 ITIH1P19827 911 aa11.89□□□□□ -0.51
NSMCE1-202ENST00000561960 SLC5A2P31639 672 aa11.89□□□□□ -0.51
NSMCE1-202ENST00000561960 OXCT1P55809 520 aa11.89□□□□□ -0.51
NSMCE1-202ENST00000561960 CCL7P80098 99 aa11.89□□□□□ -0.51
NSMCE1-202ENST00000561960 DEUP1Q05D60 604 aa11.89□□□□□ -0.51
NSMCE1-202ENST00000561960 SGCGQ13326 291 aa11.89□□□□□ -0.51
NSMCE1-202ENST00000561960 STIM1Q13586 685 aa11.89□□□□□ -0.51
NSMCE1-202ENST00000561960 SPIDRQ14159 915 aa11.89□□□□□ -0.51
NSMCE1-202ENST00000561960 EFHC1Q5JVL4 640 aa11.89□□□□□ -0.51
NSMCE1-202ENST00000561960 ARTNQ5T4W7 220 aa11.89□□□□□ -0.51
NSMCE1-202ENST00000561960 FAXCQ5TGI0 409 aa11.89□□□□□ -0.51
NSMCE1-202ENST00000561960 TRNP1Q6NT89 227 aa11.89□□□□□ -0.51
NSMCE1-202ENST00000561960 C11orf57Q6ZUT1 292 aaPredicted RBP11.89□□□□□ -0.51
NSMCE1-202ENST00000561960 BEND5Q7L4P6 421 aa11.89□□□□□ -0.51
NSMCE1-202ENST00000561960 SLC47A2Q86VL8 602 aa11.89□□□□□ -0.51
NSMCE1-202ENST00000561960 PHACTR4Q8IZ21 702 aa11.89□□□□□ -0.51
NSMCE1-202ENST00000561960 SDR16C5Q8N3Y7 309 aa11.89□□□□□ -0.51
NSMCE1-202ENST00000561960 DCAF4L2Q8NA75 395 aa11.89□□□□□ -0.51
NSMCE1-202ENST00000561960 STK32AQ8WU08 396 aa11.89□□□□□ -0.51
NSMCE1-202ENST00000561960 TSACCQ96A04 125 aaPredicted RBP11.89□□□□□ -0.51
NSMCE1-202ENST00000561960 CCDC74AQ96AQ1 378 aa11.89□□□□□ -0.51
NSMCE1-202ENST00000561960 PPP1R16AQ96I34 528 aa11.89□□□□□ -0.51
NSMCE1-202ENST00000561960 CEP63Q96MT8 703 aa11.89□□□□□ -0.51
NSMCE1-202ENST00000561960 DUSP23Q9BVJ7 150 aa11.89□□□□□ -0.51
NSMCE1-202ENST00000561960 SRRTQ9BXP5 876 aaKnown RBP11.89□□□□□ -0.51
NSMCE1-202ENST00000561960 MBNL1Q9NR56 388 aaKnown RBP11.89□□□□□ -0.51
NSMCE1-202ENST00000561960 GPR27Q9NS67 375 aa11.89□□□□□ -0.51
NSMCE1-202ENST00000561960 PISDQ9UG56 409 aa11.89□□□□□ -0.51
NSMCE1-202ENST00000561960 CNTN6Q9UQ52 1028 aa11.89□□□□□ -0.51
NSMCE1-202ENST00000561960 EME2A4GXA9 379 aaPredicted RBP11.88□□□□□ -0.51
NSMCE1-202ENST00000561960 C16orf96A6NNT2 1141 aa11.88□□□□□ -0.51
NSMCE1-202ENST00000561960 YY2O15391 372 aa11.88□□□□□ -0.51
NSMCE1-202ENST00000561960 PRKCGP05129 697 aa11.88□□□□□ -0.51
NSMCE1-202ENST00000561960 TSHRP16473 764 aa11.88□□□□□ -0.51
NSMCE1-202ENST00000561960 WT1P19544 449 aaPredicted RBP11.88□□□□□ -0.51
NSMCE1-202ENST00000561960 ITGB7P26010 798 aa11.88□□□□□ -0.51
NSMCE1-202ENST00000561960 L1CAMP32004 1257 aa11.88□□□□□ -0.51
NSMCE1-202ENST00000561960 RABIFP47224 123 aa11.88□□□□□ -0.51
NSMCE1-202ENST00000561960 SERPINH1P50454 418 aaKnown RBP11.88□□□□□ -0.51
NSMCE1-202ENST00000561960 THOP1P52888 689 aa11.88□□□□□ -0.51
NSMCE1-202ENST00000561960 SKOR1P84550 965 aa11.88□□□□□ -0.51
NSMCE1-202ENST00000561960 SLC6A3Q01959 620 aa11.88□□□□□ -0.51
NSMCE1-202ENST00000561960 COBLL1Q53SF7 1204 aa11.88□□□□□ -0.51
NSMCE1-202ENST00000561960 CARD16Q5EG05 197 aa11.88□□□□□ -0.51
NSMCE1-202ENST00000561960 FAM102AQ5T9C2 384 aaPredicted RBP11.88□□□□□ -0.51
NSMCE1-202ENST00000561960 TAF3Q5VWG9 929 aa11.88□□□□□ -0.51
NSMCE1-202ENST00000561960 KIAA1161Q6NSJ0 714 aa11.88□□□□□ -0.51
NSMCE1-202ENST00000561960 NEK5Q6P3R8 708 aa11.88□□□□□ -0.51
NSMCE1-202ENST00000561960 TRIM65Q6PJ69 517 aa11.88□□□□□ -0.51
NSMCE1-202ENST00000561960 FAM131BQ86XD5 332 aa11.88□□□□□ -0.51
NSMCE1-202ENST00000561960 HID1Q8IV36 788 aa11.88□□□□□ -0.51
NSMCE1-202ENST00000561960 ARL14Q8N4G2 192 aa11.88□□□□□ -0.51
NSMCE1-202ENST00000561960 PCDH19Q8TAB3 1148 aa11.88□□□□□ -0.51
NSMCE1-202ENST00000561960 DHTKD1Q96HY7 919 aaPredicted RBP11.88□□□□□ -0.51
NSMCE1-202ENST00000561960 FEM1CQ96JP0 617 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms