RNA–Protein interactions for RNA: ENST00000561673.1

CLK3-205, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 639 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-205ENST00000561673 A0A1W2PQC6 194 aa10.46□□□□□ -0.73
CLK3-205ENST00000561673 SRRM3A6NNA2 597 aaPredicted RBP10.46□□□□□ -0.73
CLK3-205ENST00000561673 C16orf96A6NNT2 1141 aa10.46□□□□□ -0.73
CLK3-205ENST00000561673 WASH4PA8MWX3 477 aa10.46□□□□□ -0.73
CLK3-205ENST00000561673 TAF4O00268 1085 aa10.46□□□□□ -0.73
CLK3-205ENST00000561673 BUB1O43683 1085 aa10.46□□□□□ -0.73
CLK3-205ENST00000561673 CREB3O43889 395 aa10.46□□□□□ -0.73
CLK3-205ENST00000561673 POP4O95707 220 aaKnown RBP10.46□□□□□ -0.73
CLK3-205ENST00000561673 LDOC1O95751 146 aaPredicted RBP10.46□□□□□ -0.73
CLK3-205ENST00000561673 GSRP00390 522 aa10.46□□□□□ -0.73
CLK3-205ENST00000561673 FTLP02792 175 aaPredicted RBP10.46□□□□□ -0.73
CLK3-205ENST00000561673 THEGLP0DJG4 465 aa10.46□□□□□ -0.73
CLK3-205ENST00000561673 HNRNPA2B1P22626 353 aaKnown RBP10.46□□□□□ -0.73
CLK3-205ENST00000561673 AKT2P31751 481 aa10.46□□□□□ -0.73
CLK3-205ENST00000561673 NEK3P51956 506 aa10.46□□□□□ -0.73
CLK3-205ENST00000561673 AIF1P55008 147 aa10.46□□□□□ -0.73
CLK3-205ENST00000561673 GEMIN4P57678 1058 aaKnown RBP10.46□□□□□ -0.73
CLK3-205ENST00000561673 CLDN2P57739 230 aa10.46□□□□□ -0.73
CLK3-205ENST00000561673 FGL2Q14314 439 aa10.46□□□□□ -0.73
CLK3-205ENST00000561673 NR1I3Q14994 352 aa10.46□□□□□ -0.73
CLK3-205ENST00000561673 IQCB1Q15051 598 aa10.46□□□□□ -0.73
CLK3-205ENST00000561673 ASIC2Q16515 512 aa10.46□□□□□ -0.73
CLK3-205ENST00000561673 MYLK3Q32MK0 819 aa10.46□□□□□ -0.73
CLK3-205ENST00000561673 TMEM259Q4ZIN3 620 aa10.46□□□□□ -0.73
CLK3-205ENST00000561673 CCDC157Q569K6 752 aa10.46□□□□□ -0.73
CLK3-205ENST00000561673 E4F1Q66K89 784 aaPredicted RBP10.46□□□□□ -0.73
CLK3-205ENST00000561673 PLEKHA7Q6IQ23 1121 aa10.46□□□□□ -0.73
CLK3-205ENST00000561673 FBXL19Q6PCT2 694 aa10.46□□□□□ -0.73
CLK3-205ENST00000561673 PARS2Q7L3T8 475 aaKnown RBP10.46□□□□□ -0.73
CLK3-205ENST00000561673 KANSL1Q7Z3B3 1105 aa10.46□□□□□ -0.73
CLK3-205ENST00000561673 ZNF571Q7Z3V5 609 aaPredicted RBP10.46□□□□□ -0.73
CLK3-205ENST00000561673 TMC6Q7Z403 805 aa10.46□□□□□ -0.73
CLK3-205ENST00000561673 RYBPQ8N488 228 aaPredicted RBP10.46□□□□□ -0.73
CLK3-205ENST00000561673 NETO2Q8NC67 525 aa10.46□□□□□ -0.73
CLK3-205ENST00000561673 HMCESQ96FZ2 354 aa10.46□□□□□ -0.73
CLK3-205ENST00000561673 FEM1CQ96JP0 617 aa10.46□□□□□ -0.73
CLK3-205ENST00000561673 CNDP2Q96KP4 475 aaKnown RBP10.46□□□□□ -0.73
CLK3-205ENST00000561673 SLC17A9Q9BYT1 436 aa10.46□□□□□ -0.73
CLK3-205ENST00000561673 HAUS4Q9H6D7 363 aa10.46□□□□□ -0.73
CLK3-205ENST00000561673 SLC24A3Q9HC58 644 aa10.46□□□□□ -0.73
CLK3-205ENST00000561673 DOCK4Q8N1I0 1966 aa10.46□□□□□ -0.74
CLK3-205ENST00000561673 CABIN1Q9Y6J0 2220 aa10.46□□□□□ -0.74
CLK3-205ENST00000561673 FAM149AA5PLN7 773 aa10.45□□□□□ -0.74
CLK3-205ENST00000561673 ZSCAN5CA6NGD5 496 aaPredicted RBP10.45□□□□□ -0.74
CLK3-205ENST00000561673 RASA4BC9J798 803 aa10.45□□□□□ -0.74
CLK3-205ENST00000561673 KRIT1O00522 736 aa10.45□□□□□ -0.74
CLK3-205ENST00000561673 DDX3XO00571 662 aaKnown RBP eCLIP10.45□□□□□ -0.74
CLK3-205ENST00000561673 ENC1O14682 589 aa10.45□□□□□ -0.74
CLK3-205ENST00000561673 ATMINO43313 823 aaPredicted RBP10.45□□□□□ -0.74
CLK3-205ENST00000561673 RASA4O43374 803 aa10.45□□□□□ -0.74
CLK3-205ENST00000561673 AP1G1O43747 822 aa10.45□□□□□ -0.74
CLK3-205ENST00000561673 TMCC1O94876 653 aa10.45□□□□□ -0.74
CLK3-205ENST00000561673 PAK4O96013 591 aaPredicted RBP10.45□□□□□ -0.74
CLK3-205ENST00000561673 UGT2B4P06133 528 aa10.45□□□□□ -0.74
CLK3-205ENST00000561673 PSMA2P25787 234 aa10.45□□□□□ -0.74
CLK3-205ENST00000561673 YBEYP58557 167 aaPredicted RBP10.45□□□□□ -0.74
CLK3-205ENST00000561673 SNRPD1P62314 119 aaKnown RBP10.45□□□□□ -0.74
CLK3-205ENST00000561673 RPS21P63220 83 aaKnown RBP10.45□□□□□ -0.74
CLK3-205ENST00000561673 DNAJC3Q13217 504 aa10.45□□□□□ -0.74
CLK3-205ENST00000561673 SERINC3Q13530 473 aa10.45□□□□□ -0.74
CLK3-205ENST00000561673 SMAD1Q15797 465 aaKnown RBP10.45□□□□□ -0.74
CLK3-205ENST00000561673 INO80DQ53TQ3 878 aaPredicted RBP10.45□□□□□ -0.74
CLK3-205ENST00000561673 ZNF805Q5CZA5 627 aa10.45□□□□□ -0.74
CLK3-205ENST00000561673 ATXN7L2Q5T6C5 722 aaPredicted RBP10.45□□□□□ -0.74
CLK3-205ENST00000561673 SFMBT2Q5VUG0 894 aa10.45□□□□□ -0.74
CLK3-205ENST00000561673 KIAA1161Q6NSJ0 714 aa10.45□□□□□ -0.74
CLK3-205ENST00000561673 PPP1R2P3Q6NXS1 205 aa10.45□□□□□ -0.74
CLK3-205ENST00000561673 DHRS13Q6UX07 377 aa10.45□□□□□ -0.74
CLK3-205ENST00000561673 GCNT7Q6ZNI0 430 aa10.45□□□□□ -0.74
CLK3-205ENST00000561673 ABI3BPQ7Z7G0 1075 aa10.45□□□□□ -0.74
CLK3-205ENST00000561673 ZNF354CQ86Y25 554 aa10.45□□□□□ -0.74
CLK3-205ENST00000561673 UMODL1-AS1Q8N2C9 162 aa10.45□□□□□ -0.74
CLK3-205ENST00000561673 GALNT15Q8N3T1 639 aa10.45□□□□□ -0.74
CLK3-205ENST00000561673 SLC25A45Q8N413 288 aa10.45□□□□□ -0.74
CLK3-205ENST00000561673 ARFGAP1Q8N6T3 406 aa10.45□□□□□ -0.74
CLK3-205ENST00000561673 OR13H1Q8NG92 308 aa10.45□□□□□ -0.74
CLK3-205ENST00000561673 OR2AP1Q8NGE2 309 aa10.45□□□□□ -0.74
CLK3-205ENST00000561673 LRIG1Q96JA1 1093 aa10.45□□□□□ -0.74
CLK3-205ENST00000561673 BMFQ96LC9 184 aa10.45□□□□□ -0.74
CLK3-205ENST00000561673 EPAS1Q99814 870 aa10.45□□□□□ -0.74
CLK3-205ENST00000561673 TRIM7Q9C029 511 aa10.45□□□□□ -0.74
CLK3-205ENST00000561673 TTYH3Q9C0H2 523 aa10.45□□□□□ -0.74
CLK3-205ENST00000561673 CATSPERBQ9H7T0 1116 aa10.45□□□□□ -0.74
CLK3-205ENST00000561673 CAAP1Q9H8G2 361 aa10.45□□□□□ -0.74
CLK3-205ENST00000561673 KLHL11Q9NVR0 708 aa10.45□□□□□ -0.74
CLK3-205ENST00000561673 GPATCH2LQ9NWQ4 482 aa10.45□□□□□ -0.74
CLK3-205ENST00000561673 HS3ST3A1Q9Y663 406 aa10.45□□□□□ -0.74
CLK3-205ENST00000561673 POM121BA6NF01 834 aa10.44□□□□□ -0.74
CLK3-205ENST00000561673 TMEM191CA6NGB0 347 aa10.44□□□□□ -0.74
CLK3-205ENST00000561673 IGLON5A6NGN9 336 aa10.44□□□□□ -0.74
CLK3-205ENST00000561673 RAD51BO15315 384 aa10.44□□□□□ -0.74
CLK3-205ENST00000561673 TSPAN6O43657 245 aa10.44□□□□□ -0.74
CLK3-205ENST00000561673 SDC3O75056 442 aa10.44□□□□□ -0.74
CLK3-205ENST00000561673 SERPINC1P01008 464 aa10.44□□□□□ -0.74
CLK3-205ENST00000561673 GZMAP12544 262 aa10.44□□□□□ -0.74
CLK3-205ENST00000561673 SKILP12757 684 aa10.44□□□□□ -0.74
CLK3-205ENST00000561673 DESP17661 470 aa10.44□□□□□ -0.74
CLK3-205ENST00000561673 PRKCIP41743 596 aa10.44□□□□□ -0.74
CLK3-205ENST00000561673 ABL2P42684 1182 aa10.44□□□□□ -0.74
CLK3-205ENST00000561673 KLHL30Q0D2K2 578 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms