RNA–Protein interactions for RNA: ENST00000561395.5

TPM1-231, Transcript of tropomyosin 1, human

TSL 5

Gene TPM1, Length 673 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TPM1-231	ENST00000561395	WBP2	Q969T9	261 aa		7.66	□□□□□ -1.18
TPM1-231	ENST00000561395	HMCES	Q96FZ2	354 aa		7.66	□□□□□ -1.18
TPM1-231	ENST00000561395	ZNF419	Q96HQ0	510 aa	Predicted RBP	7.66	□□□□□ -1.18
TPM1-231	ENST00000561395	ATP6V1G3	Q96LB4	118 aa		7.66	□□□□□ -1.18
TPM1-231	ENST00000561395	TEKT5	Q96M29	485 aa		7.66	□□□□□ -1.18
TPM1-231	ENST00000561395	PRICKLE1	Q96MT3	831 aa	Predicted RBP	7.66	□□□□□ -1.18
TPM1-231	ENST00000561395	SLC22A12	Q96S37	553 aa		7.66	□□□□□ -1.18
TPM1-231	ENST00000561395	IL12RB2	Q99665	862 aa		7.66	□□□□□ -1.18
TPM1-231	ENST00000561395	ROPN1B	Q9BZX4	212 aa	Predicted RBP	7.66	□□□□□ -1.18
TPM1-231	ENST00000561395	ROPN1	Q9HAT0	212 aa	Predicted RBP	7.66	□□□□□ -1.18
TPM1-231	ENST00000561395	PIDD1	Q9HB75	910 aa		7.66	□□□□□ -1.18
TPM1-231	ENST00000561395	XAB2	Q9HCS7	855 aa	Known RBP	7.66	□□□□□ -1.18
TPM1-231	ENST00000561395	PRMT8	Q9NR22	394 aa	Predicted RBP	7.66	□□□□□ -1.18
TPM1-231	ENST00000561395	ASAH2	Q9NR71	780 aa		7.66	□□□□□ -1.18
TPM1-231	ENST00000561395	GKN1	Q9NS71	199 aa		7.66	□□□□□ -1.18
TPM1-231	ENST00000561395	SMPD4	Q9NXE4	827 aa		7.66	□□□□□ -1.18
TPM1-231	ENST00000561395	GOLGA6A	Q9NYA3	693 aa		7.66	□□□□□ -1.18
TPM1-231	ENST00000561395	VPS18	Q9P253	973 aa		7.66	□□□□□ -1.18
TPM1-231	ENST00000561395	RSPH14	Q9UHP6	348 aa		7.66	□□□□□ -1.18
TPM1-231	ENST00000561395	STOML2	Q9UJZ1	356 aa		7.66	□□□□□ -1.18
TPM1-231	ENST00000561395	AGO1	Q9UL18	857 aa	Known RBP	7.66	□□□□□ -1.18
TPM1-231	ENST00000561395	MTF2	Q9Y483	593 aa	Predicted RBP	7.66	□□□□□ -1.18
TPM1-231	ENST00000561395	TEX264	Q9Y6I9	313 aa		7.66	□□□□□ -1.18
TPM1-231	ENST00000561395	NUMBL	Q9Y6R0	609 aa		7.66	□□□□□ -1.18
TPM1-231	ENST00000561395	KIF26A	Q9ULI4	1882 aa	Predicted RBP	7.66	□□□□□ -1.18
TPM1-231	ENST00000561395	LAMA1	P25391	3075 aa		7.65	□□□□□ -1.18
TPM1-231	ENST00000561395	FAM170B	A6NMN3	283 aa		7.65	□□□□□ -1.18
TPM1-231	ENST00000561395	ANHX	E9PGG2	379 aa		7.65	□□□□□ -1.18
TPM1-231	ENST00000561395	GFRA2	O00451	464 aa		7.65	□□□□□ -1.18
TPM1-231	ENST00000561395	RASGRF2	O14827	1237 aa		7.65	□□□□□ -1.18
TPM1-231	ENST00000561395	SNPH	O15079	494 aa		7.65	□□□□□ -1.18
TPM1-231	ENST00000561395	CCL16	O15467	120 aa		7.65	□□□□□ -1.18
TPM1-231	ENST00000561395	ZBTB24	O43167	697 aa	Predicted RBP	7.65	□□□□□ -1.18
TPM1-231	ENST00000561395	CACNG3	O60359	315 aa		7.65	□□□□□ -1.18
TPM1-231	ENST00000561395	GDF9	O60383	454 aa		7.65	□□□□□ -1.18
TPM1-231	ENST00000561395	RAMP2	O60895	175 aa		7.65	□□□□□ -1.18
TPM1-231	ENST00000561395	LRP3	O75074	770 aa		7.65	□□□□□ -1.18
TPM1-231	ENST00000561395	AVIL	O75366	819 aa		7.65	□□□□□ -1.18
TPM1-231	ENST00000561395	CLDN11	O75508	207 aa		7.65	□□□□□ -1.18
TPM1-231	ENST00000561395	SUN1	O94901	812 aa		7.65	□□□□□ -1.18
TPM1-231	ENST00000561395	FGF19	O95750	216 aa		7.65	□□□□□ -1.18
TPM1-231	ENST00000561395	AP2A1	O95782	977 aa		7.65	□□□□□ -1.18
TPM1-231	ENST00000561395	PEX11B	O96011	259 aa		7.65	□□□□□ -1.18
TPM1-231	ENST00000561395	IVL	P07476	585 aa		7.65	□□□□□ -1.18
TPM1-231	ENST00000561395	F5	P12259	2224 aa		7.65	□□□□□ -1.18
TPM1-231	ENST00000561395	MLN	P12872	115 aa		7.65	□□□□□ -1.18
TPM1-231	ENST00000561395	LAMP2	P13473	410 aa		7.65	□□□□□ -1.18
TPM1-231	ENST00000561395	CCNB1	P14635	433 aa		7.65	□□□□□ -1.18
TPM1-231	ENST00000561395	NFKB1	P19838	968 aa		7.65	□□□□□ -1.18
TPM1-231	ENST00000561395	OR1E1	P30953	314 aa		7.65	□□□□□ -1.18
TPM1-231	ENST00000561395	PHB	P35232	272 aa		7.65	□□□□□ -1.18
TPM1-231	ENST00000561395	ELK3	P41970	407 aa		7.65	□□□□□ -1.18
TPM1-231	ENST00000561395	LMAN1	P49257	510 aa		7.65	□□□□□ -1.18
TPM1-231	ENST00000561395	CDH4	P55283	916 aa		7.65	□□□□□ -1.18
TPM1-231	ENST00000561395	YBEY	P58557	167 aa	Predicted RBP	7.65	□□□□□ -1.18
TPM1-231	ENST00000561395	GPX6	P59796	221 aa		7.65	□□□□□ -1.18
TPM1-231	ENST00000561395	SLC7A9	P82251	487 aa		7.65	□□□□□ -1.18
TPM1-231	ENST00000561395	SARNP	P82979	210 aa	Known RBP	7.65	□□□□□ -1.18
TPM1-231	ENST00000561395	PRKCQ	Q04759	706 aa		7.65	□□□□□ -1.18
TPM1-231	ENST00000561395	STAT4	Q14765	748 aa		7.65	□□□□□ -1.18
TPM1-231	ENST00000561395	ANO4	Q32M45	955 aa		7.65	□□□□□ -1.18
TPM1-231	ENST00000561395	HP1BP3	Q5SSJ5	553 aa	Predicted RBP	7.65	□□□□□ -1.18
TPM1-231	ENST00000561395	C6orf118	Q5T5N4	469 aa		7.65	□□□□□ -1.18
TPM1-231	ENST00000561395	ADGRF1	Q5T601	910 aa		7.65	□□□□□ -1.18
TPM1-231	ENST00000561395	TTC39B	Q5VTQ0	682 aa	Predicted RBP	7.65	□□□□□ -1.18
TPM1-231	ENST00000561395	LRRC8B	Q6P9F7	803 aa		7.65	□□□□□ -1.18
TPM1-231	ENST00000561395		Q6ZNB5	142 aa		7.65	□□□□□ -1.18
TPM1-231	ENST00000561395	CHST9	Q7L1S5	443 aa		7.65	□□□□□ -1.18
TPM1-231	ENST00000561395	PID1	Q7Z2X4	250 aa		7.65	□□□□□ -1.18
TPM1-231	ENST00000561395	IGDCC3	Q8IVU1	814 aa		7.65	□□□□□ -1.18
TPM1-231	ENST00000561395	FAM217A	Q8IXS0	508 aa		7.65	□□□□□ -1.18
TPM1-231	ENST00000561395	AGGF1	Q8N302	714 aa	eCLIP	7.65	□□□□□ -1.18
TPM1-231	ENST00000561395	SH2D3C	Q8N5H7	860 aa		7.65	□□□□□ -1.18
TPM1-231	ENST00000561395	CNTD1	Q8N815	330 aa		7.65	□□□□□ -1.18
TPM1-231	ENST00000561395	ARL14EP	Q8N8R7	260 aa	Predicted RBP	7.65	□□□□□ -1.18
TPM1-231	ENST00000561395	PYROXD1	Q8WU10	500 aa		7.65	□□□□□ -1.18
TPM1-231	ENST00000561395	SMG7	Q92540	1137 aa	Known RBP	7.65	□□□□□ -1.18
TPM1-231	ENST00000561395	LRRC39	Q96DD0	335 aa		7.65	□□□□□ -1.18
TPM1-231	ENST00000561395	PGM2	Q96G03	612 aa		7.65	□□□□□ -1.18
TPM1-231	ENST00000561395	AGAP3	Q96P47	875 aa		7.65	□□□□□ -1.18
TPM1-231	ENST00000561395	CYP2S1	Q96SQ9	504 aa		7.65	□□□□□ -1.18
TPM1-231	ENST00000561395	DDX50	Q9BQ39	737 aa	Known RBP	7.65	□□□□□ -1.18
TPM1-231	ENST00000561395	CORO1B	Q9BR76	489 aa		7.65	□□□□□ -1.18
TPM1-231	ENST00000561395	MLPH	Q9BV36	600 aa	Predicted RBP	7.65	□□□□□ -1.18
TPM1-231	ENST00000561395	OSBPL6	Q9BZF3	934 aa		7.65	□□□□□ -1.18
TPM1-231	ENST00000561395	CENPH	Q9H3R5	247 aa		7.65	□□□□□ -1.18
TPM1-231	ENST00000561395	VPS37B	Q9H9H4	285 aa		7.65	□□□□□ -1.18
TPM1-231	ENST00000561395	LTB4R2	Q9NPC1	389 aa		7.65	□□□□□ -1.18
TPM1-231	ENST00000561395	SEMA4G	Q9NTN9	838 aa		7.65	□□□□□ -1.18
TPM1-231	ENST00000561395	IPO11	Q9UI26	975 aa	Known RBP	7.65	□□□□□ -1.18
TPM1-231	ENST00000561395	CHMP2B	Q9UQN3	213 aa		7.65	□□□□□ -1.18
TPM1-231	ENST00000561395	PCDHGA10	Q9Y5H3	936 aa		7.65	□□□□□ -1.18
TPM1-231	ENST00000561395	CPQ	Q9Y646	472 aa		7.65	□□□□□ -1.18
TPM1-231	ENST00000561395	ZFP37	Q9Y6Q3	630 aa	Predicted RBP	7.65	□□□□□ -1.18
TPM1-231	ENST00000561395	ITPR1	Q14643	2758 aa		7.65	□□□□□ -1.19
TPM1-231	ENST00000561395	NUP210	Q8TEM1	1887 aa	Predicted RBP	7.64	□□□□□ -1.19
TPM1-231	ENST00000561395	ASH1L	Q9NR48	2969 aa	Known RBP	7.64	□□□□□ -1.19
TPM1-231	ENST00000561395	TRAV19	A0A0A6YYK7	116 aa		7.64	□□□□□ -1.19
TPM1-231	ENST00000561395		A0A1B0GVM2	712 aa		7.64	□□□□□ -1.19
TPM1-231	ENST00000561395	EXOC1L	A0A1B0GW35	172 aa		7.64	□□□□□ -1.19

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