RNA–Protein interactions for RNA: ENST00000561367.1

KNSTRN-215, Transcript of kinetochore localized astrin (SPAG5) binding protein, human

TSL 2

Gene KNSTRN, Length 630 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KNSTRN-215	ENST00000561367	RUNDC3B	Q96NL0	473 aa		10.07	□□□□□ -0.8
KNSTRN-215	ENST00000561367	QKI	Q96PU8	341 aa	Known RBP eCLIP	10.07	□□□□□ -0.8
KNSTRN-215	ENST00000561367	FOXQ1	Q9C009	403 aa		10.07	□□□□□ -0.8
KNSTRN-215	ENST00000561367	POLM	Q9NP87	494 aa	Predicted RBP	10.07	□□□□□ -0.8
KNSTRN-215	ENST00000561367	TRHDE	Q9UKU6	1024 aa		10.07	□□□□□ -0.8
KNSTRN-215	ENST00000561367	SCML1	Q9UN30	329 aa		10.07	□□□□□ -0.8
KNSTRN-215	ENST00000561367	MFHAS1	Q9Y4C4	1052 aa		10.07	□□□□□ -0.8
KNSTRN-215	ENST00000561367	MAP4K5	Q9Y4K4	846 aa		10.07	□□□□□ -0.8
KNSTRN-215	ENST00000561367	STON1	Q9Y6Q2	735 aa		10.07	□□□□□ -0.8
KNSTRN-215	ENST00000561367	NCOR1	O75376	2440 aa		10.07	□□□□□ -0.8
KNSTRN-215	ENST00000561367		A0A1W2PQ67	120 aa		10.06	□□□□□ -0.8
KNSTRN-215	ENST00000561367	PRR33	A8MZF0	331 aa		10.06	□□□□□ -0.8
KNSTRN-215	ENST00000561367		H7C0C1	242 aa		10.06	□□□□□ -0.8
KNSTRN-215	ENST00000561367		J3KR12	359 aa		10.06	□□□□□ -0.8
KNSTRN-215	ENST00000561367	ZNF500	O60304	480 aa	Predicted RBP	10.06	□□□□□ -0.8
KNSTRN-215	ENST00000561367	GPR37L1	O60883	481 aa		10.06	□□□□□ -0.8
KNSTRN-215	ENST00000561367	RNASEH1	O60930	286 aa	Known RBP	10.06	□□□□□ -0.8
KNSTRN-215	ENST00000561367	ALDH1A2	O94788	518 aa		10.06	□□□□□ -0.8
KNSTRN-215	ENST00000561367	TMCC1	O94876	653 aa		10.06	□□□□□ -0.8
KNSTRN-215	ENST00000561367	KLF8	O95600	359 aa	Predicted RBP	10.06	□□□□□ -0.8
KNSTRN-215	ENST00000561367	CD160	O95971	181 aa		10.06	□□□□□ -0.8
KNSTRN-215	ENST00000561367	IGSF6	O95976	241 aa		10.06	□□□□□ -0.8
KNSTRN-215	ENST00000561367	ITGAV	P06756	1048 aa		10.06	□□□□□ -0.8
KNSTRN-215	ENST00000561367	HOXB2	P14652	356 aa		10.06	□□□□□ -0.8
KNSTRN-215	ENST00000561367	PECAM1	P16284	738 aa	Predicted RBP	10.06	□□□□□ -0.8
KNSTRN-215	ENST00000561367	HOXA6	P31267	233 aa		10.06	□□□□□ -0.8
KNSTRN-215	ENST00000561367	IL12RB1	P42701	662 aa		10.06	□□□□□ -0.8
KNSTRN-215	ENST00000561367	ATP5O	P48047	213 aa		10.06	□□□□□ -0.8
KNSTRN-215	ENST00000561367	ZBTB16	Q05516	673 aa		10.06	□□□□□ -0.8
KNSTRN-215	ENST00000561367	ADCY2	Q08462	1091 aa		10.06	□□□□□ -0.8
KNSTRN-215	ENST00000561367	CCDC15	Q0P6D6	951 aa		10.06	□□□□□ -0.8
KNSTRN-215	ENST00000561367	AP1B1	Q10567	949 aa		10.06	□□□□□ -0.8
KNSTRN-215	ENST00000561367	BYSL	Q13895	437 aa	Known RBP	10.06	□□□□□ -0.8
KNSTRN-215	ENST00000561367	ZNF235	Q14590	738 aa		10.06	□□□□□ -0.8
KNSTRN-215	ENST00000561367	CRY1	Q16526	586 aa		10.06	□□□□□ -0.8
KNSTRN-215	ENST00000561367	ACCSL	Q4AC99	568 aa		10.06	□□□□□ -0.8
KNSTRN-215	ENST00000561367	C2orf27A	Q580R0	203 aa		10.06	□□□□□ -0.8
KNSTRN-215	ENST00000561367	ALG1L	Q6GMV1	187 aa		10.06	□□□□□ -0.8
KNSTRN-215	ENST00000561367	AADACL2	Q6P093	401 aa		10.06	□□□□□ -0.8
KNSTRN-215	ENST00000561367	C22orf39	Q6P5X5	142 aa		10.06	□□□□□ -0.8
KNSTRN-215	ENST00000561367	C4orf22	Q6V702	233 aa		10.06	□□□□□ -0.8
KNSTRN-215	ENST00000561367	ALLC	Q8N6M5	410 aa		10.06	□□□□□ -0.8
KNSTRN-215	ENST00000561367	OR2AP1	Q8NGE2	309 aa		10.06	□□□□□ -0.8
KNSTRN-215	ENST00000561367	FRS2	Q8WU20	508 aa		10.06	□□□□□ -0.8
KNSTRN-215	ENST00000561367	CYB5D2	Q8WUJ1	264 aa		10.06	□□□□□ -0.8
KNSTRN-215	ENST00000561367	HTR3C	Q8WXA8	447 aa		10.06	□□□□□ -0.8
KNSTRN-215	ENST00000561367	RPL10L	Q96L21	214 aa	Known RBP	10.06	□□□□□ -0.8
KNSTRN-215	ENST00000561367	GDAP1L1	Q96MZ0	367 aa		10.06	□□□□□ -0.8
KNSTRN-215	ENST00000561367	IL12RB2	Q99665	862 aa		10.06	□□□□□ -0.8
KNSTRN-215	ENST00000561367	CINP	Q9BW66	212 aa	Predicted RBP	10.06	□□□□□ -0.8
KNSTRN-215	ENST00000561367	DLGAP2	Q9P1A6	1054 aa		10.06	□□□□□ -0.8
KNSTRN-215	ENST00000561367	DRG1	Q9Y295	367 aa	Known RBP	10.06	□□□□□ -0.8
KNSTRN-215	ENST00000561367	MTF2	Q9Y483	593 aa	Predicted RBP	10.06	□□□□□ -0.8
KNSTRN-215	ENST00000561367	F5	P12259	2224 aa		10.06	□□□□□ -0.8
KNSTRN-215	ENST00000561367		A0A0C4DFX4	3053 aa		10.05	□□□□□ -0.8
KNSTRN-215	ENST00000561367	MYOF	Q9NZM1	2061 aa		10.05	□□□□□ -0.8
KNSTRN-215	ENST00000561367	TTC28	Q96AY4	2481 aa		10.05	□□□□□ -0.8
KNSTRN-215	ENST00000561367	CCDC163	A0A0D9SF12	145 aa		10.05	□□□□□ -0.8
KNSTRN-215	ENST00000561367	LOC107983988	A0A1B0GUW6	1196 aa	Predicted RBP	10.05	□□□□□ -0.8
KNSTRN-215	ENST00000561367	ESPN	B1AK53	854 aa		10.05	□□□□□ -0.8
KNSTRN-215	ENST00000561367	WASH3P	C4AMC7	463 aa		10.05	□□□□□ -0.8
KNSTRN-215	ENST00000561367	CCDC188	H7C350	402 aa		10.05	□□□□□ -0.8
KNSTRN-215	ENST00000561367	TERT	O14746	1132 aa	Known RBP	10.05	□□□□□ -0.8
KNSTRN-215	ENST00000561367	LIAS	O43766	372 aa		10.05	□□□□□ -0.8
KNSTRN-215	ENST00000561367	OPHN1	O60890	802 aa		10.05	□□□□□ -0.8
KNSTRN-215	ENST00000561367	POP4	O95707	220 aa	Known RBP	10.05	□□□□□ -0.8
KNSTRN-215	ENST00000561367	PEX11B	O96011	259 aa		10.05	□□□□□ -0.8
KNSTRN-215	ENST00000561367	MT-CO1	P00395	513 aa		10.05	□□□□□ -0.8
KNSTRN-215	ENST00000561367	PRNP	P04156	253 aa		10.05	□□□□□ -0.8
KNSTRN-215	ENST00000561367	EPHX1	P07099	455 aa		10.05	□□□□□ -0.8
KNSTRN-215	ENST00000561367	CA4	P22748	312 aa		10.05	□□□□□ -0.8
KNSTRN-215	ENST00000561367	GLDC	P23378	1020 aa		10.05	□□□□□ -0.8
KNSTRN-215	ENST00000561367	ACTN2	P35609	894 aa		10.05	□□□□□ -0.8
KNSTRN-215	ENST00000561367	CTSO	P43234	321 aa	Predicted RBP	10.05	□□□□□ -0.8
KNSTRN-215	ENST00000561367	MMP13	P45452	471 aa		10.05	□□□□□ -0.8
KNSTRN-215	ENST00000561367	CXCL12	P48061	93 aa		10.05	□□□□□ -0.8
KNSTRN-215	ENST00000561367	STK19	P49842	368 aa	Predicted RBP	10.05	□□□□□ -0.8
KNSTRN-215	ENST00000561367	SEC13	P55735	322 aa		10.05	□□□□□ -0.8
KNSTRN-215	ENST00000561367	RHOA	P61586	193 aa		10.05	□□□□□ -0.8
KNSTRN-215	ENST00000561367	AP1S1	P61966	158 aa		10.05	□□□□□ -0.8
KNSTRN-215	ENST00000561367	CKAP4	Q07065	602 aa	Known RBP	10.05	□□□□□ -0.8
KNSTRN-215	ENST00000561367	SLC14A2	Q15849	920 aa		10.05	□□□□□ -0.8
KNSTRN-215	ENST00000561367	CYP1B1	Q16678	543 aa		10.05	□□□□□ -0.8
KNSTRN-215	ENST00000561367	TEX44	Q53QW1	395 aa		10.05	□□□□□ -0.8
KNSTRN-215	ENST00000561367	CARD16	Q5EG05	197 aa		10.05	□□□□□ -0.8
KNSTRN-215	ENST00000561367	EMC10	Q5UCC4	262 aa		10.05	□□□□□ -0.8
KNSTRN-215	ENST00000561367	FAM46C	Q5VWP2	391 aa		10.05	□□□□□ -0.8
KNSTRN-215	ENST00000561367	DARS2	Q6PI48	645 aa	Known RBP	10.05	□□□□□ -0.8
KNSTRN-215	ENST00000561367	NPNT	Q6UXI9	565 aa		10.05	□□□□□ -0.8
KNSTRN-215	ENST00000561367	LINGO4	Q6UY18	593 aa		10.05	□□□□□ -0.8
KNSTRN-215	ENST00000561367	VASH1	Q7L8A9	365 aa	Predicted RBP	10.05	□□□□□ -0.8
KNSTRN-215	ENST00000561367	ZC3H18	Q86VM9	953 aa	Known RBP	10.05	□□□□□ -0.8
KNSTRN-215	ENST00000561367	CREG2	Q8IUH2	290 aa		10.05	□□□□□ -0.8
KNSTRN-215	ENST00000561367	C12orf50	Q8NA57	414 aa	Predicted RBP	10.05	□□□□□ -0.8
KNSTRN-215	ENST00000561367	TXNDC5	Q8NBS9	432 aa	Known RBP	10.05	□□□□□ -0.8
KNSTRN-215	ENST00000561367	HCAR2	Q8TDS4	363 aa		10.05	□□□□□ -0.8
KNSTRN-215	ENST00000561367	GRK7	Q8WTQ7	553 aa		10.05	□□□□□ -0.8
KNSTRN-215	ENST00000561367	COG1	Q8WTW3	980 aa		10.05	□□□□□ -0.8
KNSTRN-215	ENST00000561367	SORCS1	Q8WY21	1168 aa		10.05	□□□□□ -0.8
KNSTRN-215	ENST00000561367	OR8D1	Q8WZ84	308 aa		10.05	□□□□□ -0.8

Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms