RNA–Protein interactions for RNA: ENST00000561206.1

USP8-216, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 2

Gene USP8, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-216ENST00000561206 HERC5Q9UII4 1024 aaKnown RBP3.39□□□□□ -1.87
USP8-216ENST00000561206 DAPP1Q9UN19 280 aa3.39□□□□□ -1.87
USP8-216ENST00000561206 C17orf100A8MU93 164 aa3.38□□□□□ -1.87
USP8-216ENST00000561206 HNRNPRO43390 633 aaKnown RBP3.38□□□□□ -1.87
USP8-216ENST00000561206 KIF1CO43896 1103 aaKnown RBP3.38□□□□□ -1.87
USP8-216ENST00000561206 TNFRSF6BO95407 300 aa3.38□□□□□ -1.87
USP8-216ENST00000561206 PARNO95453 639 aaKnown RBP3.38□□□□□ -1.87
USP8-216ENST00000561206 CYP4B1P13584 511 aa3.38□□□□□ -1.87
USP8-216ENST00000561206 ABCB4P21439 1286 aa3.38□□□□□ -1.87
USP8-216ENST00000561206 YWHAQP27348 245 aa3.38□□□□□ -1.87
USP8-216ENST00000561206 FMO4P31512 558 aa3.38□□□□□ -1.87
USP8-216ENST00000561206 ERVK11-1P61568 191 aa3.38□□□□□ -1.87
USP8-216ENST00000561206 ST3GAL1Q11201 340 aa3.38□□□□□ -1.87
USP8-216ENST00000561206 DCTN1Q14203 1278 aa3.38□□□□□ -1.87
USP8-216ENST00000561206 SPARCL1Q14515 664 aa3.38□□□□□ -1.87
USP8-216ENST00000561206 GALNTL6Q49A17 601 aa3.38□□□□□ -1.87
USP8-216ENST00000561206 TTC22Q5TAA0 569 aa3.38□□□□□ -1.87
USP8-216ENST00000561206 ATPAF1Q5TC12 328 aaPredicted RBP3.38□□□□□ -1.87
USP8-216ENST00000561206 DGAT2L7PQ6IED9 249 aa3.38□□□□□ -1.87
USP8-216ENST00000561206 UNQ6126/PRO20091Q6UXV3 157 aa3.38□□□□□ -1.87
USP8-216ENST00000561206 NEK10Q6ZWH5 1172 aa3.38□□□□□ -1.87
USP8-216ENST00000561206 TUBA1AQ71U36 451 aa3.38□□□□□ -1.87
USP8-216ENST00000561206 RAB11FIP2Q7L804 512 aa3.38□□□□□ -1.87
USP8-216ENST00000561206 BRSK2Q8IWQ3 736 aa3.38□□□□□ -1.87
USP8-216ENST00000561206 SCMH1Q96GD3 660 aa3.38□□□□□ -1.87
USP8-216ENST00000561206 ZNF385AQ96PM9 386 aaKnown RBP3.38□□□□□ -1.87
USP8-216ENST00000561206 TUBA1CQ9BQE3 449 aa3.38□□□□□ -1.87
USP8-216ENST00000561206 ACAD9Q9H845 621 aa3.38□□□□□ -1.87
USP8-216ENST00000561206 UBTD1Q9HAC8 227 aa3.38□□□□□ -1.87
USP8-216ENST00000561206 TMEM51Q9NW97 253 aa3.38□□□□□ -1.87
USP8-216ENST00000561206 GRHL1Q9NZI5 618 aa3.38□□□□□ -1.87
USP8-216ENST00000561206 KLQ9UEF7 1012 aa3.38□□□□□ -1.87
USP8-216ENST00000561206 A0A096LPK6 155 aa3.37□□□□□ -1.87
USP8-216ENST00000561206 SYN3O14994 580 aa3.37□□□□□ -1.87
USP8-216ENST00000561206 CYP21A2P08686 494 aa3.37□□□□□ -1.87
USP8-216ENST00000561206 CFC1BP0CG36 223 aa3.37□□□□□ -1.87
USP8-216ENST00000561206 CFC1P0CG37 223 aa3.37□□□□□ -1.87
USP8-216ENST00000561206 IGHV4-30-4P0DP06 118 aa3.37□□□□□ -1.87
USP8-216ENST00000561206 RPL3P39023 403 aaKnown RBP3.37□□□□□ -1.87
USP8-216ENST00000561206 SKIV2L2P42285 1042 aaKnown RBP3.37□□□□□ -1.87
USP8-216ENST00000561206 GPR12P47775 334 aa3.37□□□□□ -1.87
USP8-216ENST00000561206 RPS6KA3P51812 740 aa3.37□□□□□ -1.87
USP8-216ENST00000561206 AK2P54819 239 aa3.37□□□□□ -1.87
USP8-216ENST00000561206 FAM27E3Q08E93 113 aa3.37□□□□□ -1.87
USP8-216ENST00000561206 RBBP5Q15291 538 aaKnown RBP3.37□□□□□ -1.87
USP8-216ENST00000561206 PLEKHO1Q53GL0 409 aaPredicted RBP3.37□□□□□ -1.87
USP8-216ENST00000561206 FAM69BQ5VUD6 431 aa3.37□□□□□ -1.87
USP8-216ENST00000561206 CCAR1Q8IX12 1150 aaKnown RBP3.37□□□□□ -1.87
USP8-216ENST00000561206 SYTL1Q8IYJ3 562 aa3.37□□□□□ -1.87
USP8-216ENST00000561206 AADATQ8N5Z0 425 aa3.37□□□□□ -1.87
USP8-216ENST00000561206 DEPTORQ8TB45 409 aa3.37□□□□□ -1.87
USP8-216ENST00000561206 NEK9Q8TD19 979 aa3.37□□□□□ -1.87
USP8-216ENST00000561206 TBC1D22AQ8WUA7 517 aa3.37□□□□□ -1.87
USP8-216ENST00000561206 CPT1BQ92523 772 aa3.37□□□□□ -1.87
USP8-216ENST00000561206 CD101Q93033 1021 aa3.37□□□□□ -1.87
USP8-216ENST00000561206 FEM1CQ96JP0 617 aa3.37□□□□□ -1.87
USP8-216ENST00000561206 KATNAL1Q9BW62 490 aa3.37□□□□□ -1.87
USP8-216ENST00000561206 CLPBQ9H078 707 aa3.37□□□□□ -1.87
USP8-216ENST00000561206 EBF2Q9HAK2 575 aa3.37□□□□□ -1.87
USP8-216ENST00000561206 FNIP2Q9P278 1114 aa3.37□□□□□ -1.87
USP8-216ENST00000561206 C19orf53Q9UNZ5 99 aaPredicted RBP3.37□□□□□ -1.87
USP8-216ENST00000561206 GAB2Q9UQC2 676 aa3.37□□□□□ -1.87
USP8-216ENST00000561206 MORC2Q9Y6X9 1032 aaPredicted RBP3.37□□□□□ -1.87
USP8-216ENST00000561206 IGHV4OR15-8A0A075B7B6 117 aa3.36□□□□□ -1.87
USP8-216ENST00000561206 GOLGA6L3A6NEY3 463 aa3.36□□□□□ -1.87
USP8-216ENST00000561206 CHL1O00533 1208 aa3.36□□□□□ -1.87
USP8-216ENST00000561206 ZG16O60844 167 aa3.36□□□□□ -1.87
USP8-216ENST00000561206 GYS1P13807 737 aa3.36□□□□□ -1.87
USP8-216ENST00000561206 DMP1Q13316 513 aaPredicted RBP3.36□□□□□ -1.87
USP8-216ENST00000561206 PTK2BQ14289 1009 aa3.36□□□□□ -1.87
USP8-216ENST00000561206 CALCRLQ16602 461 aa3.36□□□□□ -1.87
USP8-216ENST00000561206 RINLQ6ZS11 566 aa3.36□□□□□ -1.87
USP8-216ENST00000561206 FOXL2NBQ6ZUU3 175 aa3.36□□□□□ -1.87
USP8-216ENST00000561206 MARK2Q7KZI7 788 aaKnown RBP3.36□□□□□ -1.87
USP8-216ENST00000561206 PTGR2Q8N8N7 351 aaPredicted RBP3.36□□□□□ -1.87
USP8-216ENST00000561206 OR4N2Q8NGD1 307 aa3.36□□□□□ -1.87
USP8-216ENST00000561206 PARD3BQ8TEW8 1205 aa3.36□□□□□ -1.87
USP8-216ENST00000561206 ATOH1Q92858 354 aaPredicted RBP3.36□□□□□ -1.87
USP8-216ENST00000561206 ANKRD9Q96BM1 317 aaPredicted RBP3.36□□□□□ -1.87
USP8-216ENST00000561206 EID2BQ96D98 161 aa3.36□□□□□ -1.87
USP8-216ENST00000561206 TMEM41AQ96HV5 264 aa3.36□□□□□ -1.87
USP8-216ENST00000561206 BRD8Q9H0E9 1235 aa3.36□□□□□ -1.87
USP8-216ENST00000561206 MVB12BQ9H7P6 319 aa3.36□□□□□ -1.87
USP8-216ENST00000561206 PRDM8Q9NQV8 689 aa3.36□□□□□ -1.87
USP8-216ENST00000561206 CHPF2Q9P2E5 772 aa3.36□□□□□ -1.87
USP8-216ENST00000561206 FBXO40Q9UH90 709 aa3.36□□□□□ -1.87
USP8-216ENST00000561206 BAG5Q9UL15 447 aa3.36□□□□□ -1.87
USP8-216ENST00000561206 TARSL2A2RTX5 802 aaKnown RBP3.35□□□□□ -1.87
USP8-216ENST00000561206 FAM172BPA6NC97 362 aa3.35□□□□□ -1.87
USP8-216ENST00000561206 J3KR12 359 aa3.35□□□□□ -1.87
USP8-216ENST00000561206 ACTL6BO94805 426 aa3.35□□□□□ -1.87
USP8-216ENST00000561206 PMS2P2O95744 297 aa3.35□□□□□ -1.87
USP8-216ENST00000561206 ITGA2BP08514 1039 aa3.35□□□□□ -1.87
USP8-216ENST00000561206 CHN1P15882 459 aa3.35□□□□□ -1.87
USP8-216ENST00000561206 MYF6P23409 242 aa3.35□□□□□ -1.87
USP8-216ENST00000561206 SERPINA4P29622 427 aa3.35□□□□□ -1.87
USP8-216ENST00000561206 AVPR2P30518 371 aa3.35□□□□□ -1.87
USP8-216ENST00000561206 CYP4A11Q02928 519 aa3.35□□□□□ -1.87
USP8-216ENST00000561206 STARD3Q14849 445 aa3.35□□□□□ -1.87
USP8-216ENST00000561206 KLHL24Q6TFL4 600 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 125.2 ms