RNA–Protein interactions for RNA: ENST00000561061.5

ZEB1-221, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 970 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-221ENST00000561061 SNRPNP63162 240 aaKnown RBP6.83□□□□□ -1.32
ZEB1-221ENST00000561061 NFATC3Q12968 1075 aa6.83□□□□□ -1.32
ZEB1-221ENST00000561061 ADAM9Q13443 819 aa6.83□□□□□ -1.32
ZEB1-221ENST00000561061 ZNF284Q2VY69 593 aa6.83□□□□□ -1.32
ZEB1-221ENST00000561061 ZSCAN23Q3MJ62 389 aa6.83□□□□□ -1.32
ZEB1-221ENST00000561061 FOXD4L6Q3SYB3 417 aaPredicted RBP6.83□□□□□ -1.32
ZEB1-221ENST00000561061 OR6B2Q6IFH4 312 aa6.83□□□□□ -1.32
ZEB1-221ENST00000561061 CXorf57Q6NSI4 855 aaKnown RBP6.83□□□□□ -1.32
ZEB1-221ENST00000561061 GUSBP11Q6P575 273 aa6.83□□□□□ -1.32
ZEB1-221ENST00000561061 FOXD4L3Q6VB84 417 aaPredicted RBP6.83□□□□□ -1.32
ZEB1-221ENST00000561061 CCDC81Q6ZN84 652 aa6.83□□□□□ -1.32
ZEB1-221ENST00000561061 RBM44Q6ZP01 1051 aaKnown RBP6.83□□□□□ -1.32
ZEB1-221ENST00000561061 PTAR1Q7Z6K3 402 aaPredicted RBP6.83□□□□□ -1.32
ZEB1-221ENST00000561061 ABI3BPQ7Z7G0 1075 aa6.83□□□□□ -1.32
ZEB1-221ENST00000561061 HORMAD1Q86X24 394 aa6.83□□□□□ -1.32
ZEB1-221ENST00000561061 CCAR2Q8N163 923 aaKnown RBP6.83□□□□□ -1.32
ZEB1-221ENST00000561061 GUF1Q8N442 669 aaKnown RBP6.83□□□□□ -1.32
ZEB1-221ENST00000561061 EXD3Q8N9H8 876 aa6.83□□□□□ -1.32
ZEB1-221ENST00000561061 ZNF548Q8NEK5 533 aaPredicted RBP6.83□□□□□ -1.32
ZEB1-221ENST00000561061 ERCC4Q92889 916 aaPredicted RBP6.83□□□□□ -1.32
ZEB1-221ENST00000561061 ARRDC3Q96B67 414 aa6.83□□□□□ -1.32
ZEB1-221ENST00000561061 ALG14Q96F25 216 aa6.83□□□□□ -1.32
ZEB1-221ENST00000561061 CCDC97Q96F63 343 aaPredicted RBP6.83□□□□□ -1.32
ZEB1-221ENST00000561061 IFT43Q96FT9 208 aa6.83□□□□□ -1.32
ZEB1-221ENST00000561061 SCARF2Q96GP6 870 aaPredicted RBP6.83□□□□□ -1.32
ZEB1-221ENST00000561061 BTN2A3PQ96KV6 586 aa6.83□□□□□ -1.32
ZEB1-221ENST00000561061 SLC46A1Q96NT5 459 aa6.83□□□□□ -1.32
ZEB1-221ENST00000561061 PRMT1Q99873 361 aaKnown RBP6.83□□□□□ -1.32
ZEB1-221ENST00000561061 ZSWIM1Q9BR11 485 aa6.83□□□□□ -1.32
ZEB1-221ENST00000561061 ABCG4Q9H172 646 aa6.83□□□□□ -1.32
ZEB1-221ENST00000561061 NEUROD4Q9HD90 331 aa6.83□□□□□ -1.32
ZEB1-221ENST00000561061 GPR27Q9NS67 375 aa6.83□□□□□ -1.32
ZEB1-221ENST00000561061 IL17BQ9UHF5 180 aa6.83□□□□□ -1.32
ZEB1-221ENST00000561061 SLC25A13Q9UJS0 675 aa6.83□□□□□ -1.32
ZEB1-221ENST00000561061 PPM1HQ9ULR3 514 aa6.83□□□□□ -1.32
ZEB1-221ENST00000561061 NOVA2Q9UNW9 492 aaKnown RBP6.83□□□□□ -1.32
ZEB1-221ENST00000561061 MAPK8IP1Q9UQF2 711 aa6.83□□□□□ -1.32
ZEB1-221ENST00000561061 NAALADL1Q9UQQ1 740 aa6.83□□□□□ -1.32
ZEB1-221ENST00000561061 COQ4Q9Y3A0 265 aa6.83□□□□□ -1.32
ZEB1-221ENST00000561061 PCDHGA8Q9Y5G5 932 aa6.83□□□□□ -1.32
ZEB1-221ENST00000561061 HEMK1Q9Y5R4 338 aaPredicted RBP6.83□□□□□ -1.32
ZEB1-221ENST00000561061 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.82□□□□□ -1.32
ZEB1-221ENST00000561061 A0A1B0GVL5 298 aa6.82□□□□□ -1.32
ZEB1-221ENST00000561061 NEMP2A6NFY4 417 aa6.82□□□□□ -1.32
ZEB1-221ENST00000561061 A6NNZ2 444 aa6.82□□□□□ -1.32
ZEB1-221ENST00000561061 F5H5T6 163 aa6.82□□□□□ -1.32
ZEB1-221ENST00000561061 MCF2LO15068 1137 aa6.82□□□□□ -1.32
ZEB1-221ENST00000561061 CALCAP01258 141 aa6.82□□□□□ -1.32
ZEB1-221ENST00000561061 IGLV3-25P01717 112 aa6.82□□□□□ -1.32
ZEB1-221ENST00000561061 PAEPP09466 180 aa6.82□□□□□ -1.32
ZEB1-221ENST00000561061 EPB41P11171 864 aaKnown RBP6.82□□□□□ -1.32
ZEB1-221ENST00000561061 TBXAS1P24557 533 aaPredicted RBP6.82□□□□□ -1.32
ZEB1-221ENST00000561061 BRD2P25440 801 aaKnown RBP6.82□□□□□ -1.32
ZEB1-221ENST00000561061 RPL34P49207 117 aaKnown RBP6.82□□□□□ -1.32
ZEB1-221ENST00000561061 PDX1P52945 283 aa6.82□□□□□ -1.32
ZEB1-221ENST00000561061 HNRNPKP61978 463 aaKnown RBP eCLIP6.82□□□□□ -1.32
ZEB1-221ENST00000561061 PITX1P78337 314 aaPredicted RBP6.82□□□□□ -1.32
ZEB1-221ENST00000561061 NFKB2Q00653 900 aa6.82□□□□□ -1.32
ZEB1-221ENST00000561061 TYRO3Q06418 890 aa6.82□□□□□ -1.32
ZEB1-221ENST00000561061 LRMPQ12912 555 aa6.82□□□□□ -1.32
ZEB1-221ENST00000561061 ZNF177Q13360 481 aaPredicted RBP6.82□□□□□ -1.32
ZEB1-221ENST00000561061 DRAP1Q14919 205 aaPredicted RBP6.82□□□□□ -1.32
ZEB1-221ENST00000561061 DLG2Q15700 870 aa6.82□□□□□ -1.32
ZEB1-221ENST00000561061 CDKN3Q16667 212 aa6.82□□□□□ -1.32
ZEB1-221ENST00000561061 EDRF1Q3B7T1 1238 aa6.82□□□□□ -1.32
ZEB1-221ENST00000561061 ARL13BQ3SXY8 428 aa6.82□□□□□ -1.32
ZEB1-221ENST00000561061 LINC00303Q3SY05 128 aa6.82□□□□□ -1.32
ZEB1-221ENST00000561061 ACCSLQ4AC99 568 aa6.82□□□□□ -1.32
ZEB1-221ENST00000561061 ZC3H12AQ5D1E8 599 aaKnown RBP6.82□□□□□ -1.32
ZEB1-221ENST00000561061 ZNF542PQ5EBM4 170 aa6.82□□□□□ -1.32
ZEB1-221ENST00000561061 DCAF17Q5H9S7 520 aaPredicted RBP6.82□□□□□ -1.32
ZEB1-221ENST00000561061 RABGAP1LQ5R372 815 aa6.82□□□□□ -1.32
ZEB1-221ENST00000561061 PERM1Q5SV97 790 aa6.82□□□□□ -1.32
ZEB1-221ENST00000561061 TTC39BQ5VTQ0 682 aaPredicted RBP6.82□□□□□ -1.32
ZEB1-221ENST00000561061 TCERG1LQ5VWI1 586 aa6.82□□□□□ -1.32
ZEB1-221ENST00000561061 SYPL2Q5VXT5 272 aa6.82□□□□□ -1.32
ZEB1-221ENST00000561061 SEL1L3Q68CR1 1132 aa6.82□□□□□ -1.32
ZEB1-221ENST00000561061 ZCCHC8Q6NZY4 707 aaKnown RBP6.82□□□□□ -1.32
ZEB1-221ENST00000561061 NEK5Q6P3R8 708 aa6.82□□□□□ -1.32
ZEB1-221ENST00000561061 TMEM270Q6UE05 265 aa6.82□□□□□ -1.32
ZEB1-221ENST00000561061 KYAT3Q6YP21 454 aaKnown RBP6.82□□□□□ -1.32
ZEB1-221ENST00000561061 EFL1Q7Z2Z2 1120 aaKnown RBP6.82□□□□□ -1.32
ZEB1-221ENST00000561061 SH2D3CQ8N5H7 860 aa6.82□□□□□ -1.32
ZEB1-221ENST00000561061 OR52K2Q8NGK3 314 aa6.82□□□□□ -1.32
ZEB1-221ENST00000561061 STK32AQ8WU08 396 aa6.82□□□□□ -1.32
ZEB1-221ENST00000561061 FAM149B1Q96BN6 582 aa6.82□□□□□ -1.32
ZEB1-221ENST00000561061 GRAMD1AQ96CP6 724 aa6.82□□□□□ -1.32
ZEB1-221ENST00000561061 HSFY1Q96LI6 401 aa6.82□□□□□ -1.32
ZEB1-221ENST00000561061 DUSP23Q9BVJ7 150 aa6.82□□□□□ -1.32
ZEB1-221ENST00000561061 MIS12Q9H081 205 aa6.82□□□□□ -1.32
ZEB1-221ENST00000561061 DNAJC28Q9NX36 388 aa6.82□□□□□ -1.32
ZEB1-221ENST00000561061 USP25Q9UHP3 1055 aa6.82□□□□□ -1.32
ZEB1-221ENST00000561061 KIAA1257Q9ULG3 409 aa6.82□□□□□ -1.32
ZEB1-221ENST00000561061 ZFR2Q9UPR6 939 aaKnown RBP6.82□□□□□ -1.32
ZEB1-221ENST00000561061 HPSEQ9Y251 543 aa6.82□□□□□ -1.32
ZEB1-221ENST00000561061 DIDO1Q9BTC0 2240 aaKnown RBP6.82□□□□□ -1.32
ZEB1-221ENST00000561061 CCDC187A0A096LP49 1063 aa6.81□□□□□ -1.32
ZEB1-221ENST00000561061 CPED1A4D0V7 1026 aa6.81□□□□□ -1.32
ZEB1-221ENST00000561061 EME2A4GXA9 379 aaPredicted RBP6.81□□□□□ -1.32
ZEB1-221ENST00000561061 POM121BA6NF01 834 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms