RNA–Protein interactions for RNA: ENST00000561036.1

HDDC3-206, Transcript of HD domain containing 3, humanhuman

TSL 3

Gene HDDC3, Length 457 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-206ENST00000561036 DDI1Q8WTU0 396 aa17.35■□□□□ 0.37
HDDC3-206ENST00000561036 USP13Q92995 863 aaPredicted RBP17.35■□□□□ 0.37
HDDC3-206ENST00000561036 ZNF669Q96BR6 464 aaPredicted RBP17.35■□□□□ 0.37
HDDC3-206ENST00000561036 ABHD8Q96I13 439 aa17.35■□□□□ 0.37
HDDC3-206ENST00000561036 FCRL3Q96P31 734 aaPredicted RBP17.35■□□□□ 0.37
HDDC3-206ENST00000561036 SEMA3CQ99985 751 aa17.35■□□□□ 0.37
HDDC3-206ENST00000561036 TRIM56Q9BRZ2 755 aaKnown RBP17.35■□□□□ 0.37
HDDC3-206ENST00000561036 KCNK9Q9NPC2 374 aa17.35■□□□□ 0.37
HDDC3-206ENST00000561036 TDP1Q9NUW8 608 aa17.35■□□□□ 0.37
HDDC3-206ENST00000561036 NKIRAS1Q9NYS0 192 aa17.35■□□□□ 0.37
HDDC3-206ENST00000561036 TBC1D14Q9P2M4 693 aa17.35■□□□□ 0.37
HDDC3-206ENST00000561036 PRKAG3Q9UGI9 489 aa17.35■□□□□ 0.37
HDDC3-206ENST00000561036 ZCWPW2A0A1B0GU75 182 aa17.34■□□□□ 0.37
HDDC3-206ENST00000561036 FAM47DPA6NHR8 397 aa17.34■□□□□ 0.37
HDDC3-206ENST00000561036 CBX4O00257 560 aa17.34■□□□□ 0.37
HDDC3-206ENST00000561036 PER2O15055 1255 aa17.34■□□□□ 0.37
HDDC3-206ENST00000561036 SERPINF2P08697 491 aa17.34■□□□□ 0.37
HDDC3-206ENST00000561036 TPH1P17752 444 aa17.34■□□□□ 0.37
HDDC3-206ENST00000561036 HLA-DPA1P20036 260 aa17.34■□□□□ 0.37
HDDC3-206ENST00000561036 SERPINH1P50454 418 aaKnown RBP17.34■□□□□ 0.37
HDDC3-206ENST00000561036 LAMB3Q13751 1172 aa17.34■□□□□ 0.37
HDDC3-206ENST00000561036 CYTH1Q15438 398 aa17.34■□□□□ 0.37
HDDC3-206ENST00000561036 SLC5A9Q2M3M2 681 aa17.34■□□□□ 0.37
HDDC3-206ENST00000561036 TIFABQ6ZNK6 161 aa17.34■□□□□ 0.37
HDDC3-206ENST00000561036 GRASPQ7Z6J2 395 aaPredicted RBP17.34■□□□□ 0.37
HDDC3-206ENST00000561036 METTL3Q86U44 580 aaKnown RBP17.34■□□□□ 0.37
HDDC3-206ENST00000561036 MDM1Q8TC05 714 aa17.34■□□□□ 0.37
HDDC3-206ENST00000561036 ACDQ96AP0 544 aa17.34■□□□□ 0.37
HDDC3-206ENST00000561036 OTUB2Q96DC9 234 aa17.34■□□□□ 0.37
HDDC3-206ENST00000561036 ALG14Q96F25 216 aa17.34■□□□□ 0.37
HDDC3-206ENST00000561036 SGSM3Q96HU1 749 aa17.34■□□□□ 0.37
HDDC3-206ENST00000561036 C2orf49Q9BVC5 232 aaPredicted RBP17.34■□□□□ 0.37
HDDC3-206ENST00000561036 PBX4Q9BYU1 374 aa17.34■□□□□ 0.37
HDDC3-206ENST00000561036 CCDC134Q9H6E4 229 aa17.34■□□□□ 0.37
HDDC3-206ENST00000561036 DZANK1Q9NVP4 752 aa17.34■□□□□ 0.37
HDDC3-206ENST00000561036 NSMCE4AQ9NXX6 385 aa17.34■□□□□ 0.37
HDDC3-206ENST00000561036 KIAA1522Q9P206 1035 aaPredicted RBP17.34■□□□□ 0.37
HDDC3-206ENST00000561036 VPS28Q9UK41 221 aa17.34■□□□□ 0.37
HDDC3-206ENST00000561036 TCAF1Q9Y4C2 921 aa17.34■□□□□ 0.37
HDDC3-206ENST00000561036 ARIH1Q9Y4X5 557 aaPredicted RBP17.34■□□□□ 0.37
HDDC3-206ENST00000561036 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.33■□□□□ 0.36
HDDC3-206ENST00000561036 MUSKO15146 869 aa17.33■□□□□ 0.36
HDDC3-206ENST00000561036 FGF1P05230 155 aa17.33■□□□□ 0.36
HDDC3-206ENST00000561036 CREB1P16220 341 aa17.33■□□□□ 0.36
HDDC3-206ENST00000561036 CR2P20023 1033 aa17.33■□□□□ 0.36
HDDC3-206ENST00000561036 MZF1P28698 734 aaPredicted RBP17.33■□□□□ 0.36
HDDC3-206ENST00000561036 PBX2P40425 430 aa17.33■□□□□ 0.36
HDDC3-206ENST00000561036 PLK1P53350 603 aa17.33■□□□□ 0.36
HDDC3-206ENST00000561036 ARF5P84085 180 aa17.33■□□□□ 0.36
HDDC3-206ENST00000561036 NSUN2Q08J23 767 aaKnown RBP eCLIP17.33■□□□□ 0.36
HDDC3-206ENST00000561036 USP4Q13107 963 aa17.33■□□□□ 0.36
HDDC3-206ENST00000561036 SLC1A5Q15758 541 aa17.33■□□□□ 0.36
HDDC3-206ENST00000561036 ZNF77Q15935 545 aa17.33■□□□□ 0.36
HDDC3-206ENST00000561036 PCSK7Q16549 785 aa17.33■□□□□ 0.36
HDDC3-206ENST00000561036 FSCBQ5H9T9 825 aa17.33■□□□□ 0.36
HDDC3-206ENST00000561036 PDPK2PQ6A1A2 396 aa17.33■□□□□ 0.36
HDDC3-206ENST00000561036 LEKR1Q6ZMV7 388 aa17.33■□□□□ 0.36
HDDC3-206ENST00000561036 NLRP9Q7RTR0 991 aa17.33■□□□□ 0.36
HDDC3-206ENST00000561036 RASSF3Q86WH2 238 aa17.33■□□□□ 0.36
HDDC3-206ENST00000561036 ATXN2LQ8WWM7 1075 aaKnown RBP17.33■□□□□ 0.36
HDDC3-206ENST00000561036 IFT43Q96FT9 208 aa17.33■□□□□ 0.36
HDDC3-206ENST00000561036 NUDCD1Q96RS6 583 aa17.33■□□□□ 0.36
HDDC3-206ENST00000561036 CPNE1Q99829 537 aa17.33■□□□□ 0.36
HDDC3-206ENST00000561036 EPN3Q9H201 632 aa17.33■□□□□ 0.36
HDDC3-206ENST00000561036 NKX2-4Q9H2Z4 354 aa17.33■□□□□ 0.36
HDDC3-206ENST00000561036 SFXN1Q9H9B4 322 aa17.33■□□□□ 0.36
HDDC3-206ENST00000561036 KIF9Q9HAQ2 790 aa17.33■□□□□ 0.36
HDDC3-206ENST00000561036 PIDD1Q9HB75 910 aa17.33■□□□□ 0.36
HDDC3-206ENST00000561036 PPANQ9NQ55 473 aaKnown RBP17.33■□□□□ 0.36
HDDC3-206ENST00000561036 CHRAC1Q9NRG0 131 aa17.33■□□□□ 0.36
HDDC3-206ENST00000561036 A0A1W2PPM1 405 aa17.32■□□□□ 0.36
HDDC3-206ENST00000561036 HEATR9A2RTY3 570 aa17.32■□□□□ 0.36
HDDC3-206ENST00000561036 FOXO6A8MYZ6 492 aa17.32■□□□□ 0.36
HDDC3-206ENST00000561036 SLC9A3R1O14745 358 aaPredicted RBP17.32■□□□□ 0.36
HDDC3-206ENST00000561036 SCAMP3O14828 347 aaKnown RBP17.32■□□□□ 0.36
HDDC3-206ENST00000561036 INSIG1O15503 277 aa17.32■□□□□ 0.36
HDDC3-206ENST00000561036 TYROBPO43914 113 aa17.32■□□□□ 0.36
HDDC3-206ENST00000561036 PIAS1O75925 651 aa17.32■□□□□ 0.36
HDDC3-206ENST00000561036 PAPSS2O95340 614 aaPredicted RBP17.32■□□□□ 0.36
HDDC3-206ENST00000561036 KRT4P19013 534 aa17.32■□□□□ 0.36
HDDC3-206ENST00000561036 PAMP19021 973 aa17.32■□□□□ 0.36
HDDC3-206ENST00000561036 GLDCP23378 1020 aa17.32■□□□□ 0.36
HDDC3-206ENST00000561036 CSKP41240 450 aa17.32■□□□□ 0.36
HDDC3-206ENST00000561036 SLC18A2Q05940 514 aa17.32■□□□□ 0.36
HDDC3-206ENST00000561036 CDK18Q07002 472 aa17.32■□□□□ 0.36
HDDC3-206ENST00000561036 SLC20A2Q08357 652 aa17.32■□□□□ 0.36
HDDC3-206ENST00000561036 GRTP1Q5TC63 336 aa17.32■□□□□ 0.36
HDDC3-206ENST00000561036 PPP2R2DQ66LE6 453 aa17.32■□□□□ 0.36
HDDC3-206ENST00000561036 RETSATQ6NUM9 610 aa17.32■□□□□ 0.36
HDDC3-206ENST00000561036 ADGRD2Q7Z7M1 963 aa17.32■□□□□ 0.36
HDDC3-206ENST00000561036 RBM23Q86U06 439 aaKnown RBP17.32■□□□□ 0.36
HDDC3-206ENST00000561036 SMG7Q92540 1137 aaKnown RBP17.32■□□□□ 0.36
HDDC3-206ENST00000561036 PPP2R3CQ969Q6 453 aa17.32■□□□□ 0.36
HDDC3-206ENST00000561036 GDF15Q99988 308 aa17.32■□□□□ 0.36
HDDC3-206ENST00000561036 SMG9Q9H0W8 520 aaKnown RBP17.32■□□□□ 0.36
HDDC3-206ENST00000561036 ZFATQ9P243 1243 aa17.32■□□□□ 0.36
HDDC3-206ENST00000561036 TXNDC16Q9P2K2 825 aa17.32■□□□□ 0.36
HDDC3-206ENST00000561036 CCL26Q9Y258 94 aa17.32■□□□□ 0.36
HDDC3-206ENST00000561036 MRPS23Q9Y3D9 190 aaKnown RBP17.32■□□□□ 0.36
HDDC3-206ENST00000561036 MKI67P46013 3256 aaKnown RBP17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms