RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 TRIM64BA6NI03 449 aa14.15□□□□□ -0.14
RABGGTA-220ENST00000560998 CLDN5O00501 218 aa14.15□□□□□ -0.14
RABGGTA-220ENST00000560998 GLRA3O75311 464 aa14.15□□□□□ -0.14
RABGGTA-220ENST00000560998 DAB1O75553 588 aa14.15□□□□□ -0.14
RABGGTA-220ENST00000560998 PTPN1P18031 435 aaKnown RBP14.15□□□□□ -0.14
RABGGTA-220ENST00000560998 RXRGP48443 463 aa14.15□□□□□ -0.14
RABGGTA-220ENST00000560998 NUMBP49757 651 aa14.15□□□□□ -0.14
RABGGTA-220ENST00000560998 EIF2B2P49770 351 aaKnown RBP14.15□□□□□ -0.14
RABGGTA-220ENST00000560998 ZNF157P51786 506 aaPredicted RBP14.15□□□□□ -0.14
RABGGTA-220ENST00000560998 NDST2P52849 883 aa14.15□□□□□ -0.14
RABGGTA-220ENST00000560998 MRPS6P82932 125 aaKnown RBP14.15□□□□□ -0.14
RABGGTA-220ENST00000560998 ADIGQ0VDE8 80 aa14.15□□□□□ -0.14
RABGGTA-220ENST00000560998 SLC25A52Q3SY17 297 aa14.15□□□□□ -0.14
RABGGTA-220ENST00000560998 ZNF362Q5T0B9 420 aaPredicted RBP14.15□□□□□ -0.14
RABGGTA-220ENST00000560998 WSCD1Q658N2 575 aa14.15□□□□□ -0.14
RABGGTA-220ENST00000560998 C4orf22Q6V702 233 aa14.15□□□□□ -0.14
RABGGTA-220ENST00000560998 MAVSQ7Z434 540 aa14.15□□□□□ -0.14
RABGGTA-220ENST00000560998 NANOGNBQ7Z5D8 188 aa14.15□□□□□ -0.14
RABGGTA-220ENST00000560998 DEFB106AQ8N104 65 aa14.15□□□□□ -0.14
RABGGTA-220ENST00000560998 GALNT4Q8N4A0 578 aa14.15□□□□□ -0.14
RABGGTA-220ENST00000560998 KYQ8NBH2 561 aa14.15□□□□□ -0.14
RABGGTA-220ENST00000560998 TRUB1Q8WWH5 349 aaKnown RBP14.15□□□□□ -0.14
RABGGTA-220ENST00000560998 SOCS4Q8WXH5 440 aa14.15□□□□□ -0.14
RABGGTA-220ENST00000560998 NDRG1Q92597 394 aaKnown RBP14.15□□□□□ -0.14
RABGGTA-220ENST00000560998 ZFP42Q96MM3 310 aa14.15□□□□□ -0.14
RABGGTA-220ENST00000560998 QKIQ96PU8 341 aaKnown RBP eCLIP14.15□□□□□ -0.14
RABGGTA-220ENST00000560998 ANKRD60Q9BZ19 345 aa14.15□□□□□ -0.14
RABGGTA-220ENST00000560998 TRNAU1APQ9NX07 287 aaKnown RBP14.15□□□□□ -0.14
RABGGTA-220ENST00000560998 DOLKQ9UPQ8 538 aa14.15□□□□□ -0.14
RABGGTA-220ENST00000560998 HEMK1Q9Y5R4 338 aaPredicted RBP14.15□□□□□ -0.14
RABGGTA-220ENST00000560998 USP3Q9Y6I4 520 aa14.15□□□□□ -0.14
RABGGTA-220ENST00000560998 GABRDO14764 452 aa14.14□□□□□ -0.15
RABGGTA-220ENST00000560998 GCATO75600 419 aa14.14□□□□□ -0.15
RABGGTA-220ENST00000560998 TOMM70O94826 608 aa14.14□□□□□ -0.15
RABGGTA-220ENST00000560998 NPR3P17342 541 aa14.14□□□□□ -0.15
RABGGTA-220ENST00000560998 NCF2P19878 526 aaPredicted RBP14.14□□□□□ -0.15
RABGGTA-220ENST00000560998 SULT1E1P49888 294 aa14.14□□□□□ -0.15
RABGGTA-220ENST00000560998 OTUD1Q5VV17 481 aaPredicted RBP14.14□□□□□ -0.15
RABGGTA-220ENST00000560998 NCBP2-AS2Q69YL0 99 aa14.14□□□□□ -0.15
RABGGTA-220ENST00000560998 ZCCHC23Q6ZST2 131 aa14.14□□□□□ -0.15
RABGGTA-220ENST00000560998 PAQR9Q6ZVX9 377 aa14.14□□□□□ -0.15
RABGGTA-220ENST00000560998 ARMCX6Q7L4S7 300 aa14.14□□□□□ -0.15
RABGGTA-220ENST00000560998 CAND1Q86VP6 1230 aaKnown RBP14.14□□□□□ -0.15
RABGGTA-220ENST00000560998 GSDMBQ8TAX9 411 aa14.14□□□□□ -0.15
RABGGTA-220ENST00000560998 CNDP1Q96KN2 507 aa14.14□□□□□ -0.15
RABGGTA-220ENST00000560998 HGH1Q9BTY7 390 aa14.14□□□□□ -0.15
RABGGTA-220ENST00000560998 CAAP1Q9H8G2 361 aa14.14□□□□□ -0.15
RABGGTA-220ENST00000560998 OLAHQ9NV23 265 aa14.14□□□□□ -0.15
RABGGTA-220ENST00000560998 TMEM9Q9P0T7 183 aa14.14□□□□□ -0.15
RABGGTA-220ENST00000560998 FZD10Q9ULW2 581 aa14.14□□□□□ -0.15
RABGGTA-220ENST00000560998 CDY2AQ9Y6F7 541 aa14.14□□□□□ -0.15
RABGGTA-220ENST00000560998 CDY1Q9Y6F8 540 aa14.14□□□□□ -0.15
RABGGTA-220ENST00000560998 SLC30A1Q9Y6M5 507 aa14.14□□□□□ -0.15
RABGGTA-220ENST00000560998 MEIS3P2A8K0S8 358 aa14.14□□□□□ -0.15
RABGGTA-220ENST00000560998 ZNF195O14628 629 aa14.14□□□□□ -0.15
RABGGTA-220ENST00000560998 BEST1O76090 585 aa14.14□□□□□ -0.15
RABGGTA-220ENST00000560998 AKR1A1P14550 325 aa14.14□□□□□ -0.15
RABGGTA-220ENST00000560998 IGFBP6P24592 240 aaPredicted RBP14.14□□□□□ -0.15
RABGGTA-220ENST00000560998 DCKP27707 260 aa14.14□□□□□ -0.15
RABGGTA-220ENST00000560998 ADSLP30566 484 aaPredicted RBP14.14□□□□□ -0.15
RABGGTA-220ENST00000560998 HARS2P49590 506 aaKnown RBP14.14□□□□□ -0.15
RABGGTA-220ENST00000560998 PPP2R5DQ14738 602 aa14.14□□□□□ -0.15
RABGGTA-220ENST00000560998 MGAT5BQ3V5L5 792 aa14.14□□□□□ -0.15
RABGGTA-220ENST00000560998 KCNT2Q6UVM3 1135 aa14.14□□□□□ -0.15
RABGGTA-220ENST00000560998 PGAM4Q8N0Y7 254 aa14.14□□□□□ -0.15
RABGGTA-220ENST00000560998 PYROXD2Q8N2H3 581 aa14.14□□□□□ -0.15
RABGGTA-220ENST00000560998 FIBCD1Q8N539 461 aa14.14□□□□□ -0.15
RABGGTA-220ENST00000560998 MCUQ8NE86 351 aa14.14□□□□□ -0.15
RABGGTA-220ENST00000560998 TRPV1Q8NER1 839 aa14.14□□□□□ -0.15
RABGGTA-220ENST00000560998 STON2Q8WXE9 905 aa14.14□□□□□ -0.15
RABGGTA-220ENST00000560998 KCTD13Q8WZ19 329 aa14.14□□□□□ -0.15
RABGGTA-220ENST00000560998 CFAP36Q96G28 342 aa14.14□□□□□ -0.15
RABGGTA-220ENST00000560998 CCDC138Q96M89 665 aa14.14□□□□□ -0.15
RABGGTA-220ENST00000560998 POPDC2Q9HBU9 364 aa14.14□□□□□ -0.15
RABGGTA-220ENST00000560998 RCOR3Q9P2K3 495 aaPredicted RBP14.14□□□□□ -0.15
RABGGTA-220ENST00000560998 EBF1Q9UH73 591 aa14.14□□□□□ -0.15
RABGGTA-220ENST00000560998 TRPV2Q9Y5S1 764 aa14.14□□□□□ -0.15
RABGGTA-220ENST00000560998 LOC100653049A0A140TA62 436 aa14.13□□□□□ -0.15
RABGGTA-220ENST00000560998 KPNA6O60684 536 aa14.13□□□□□ -0.15
RABGGTA-220ENST00000560998 DUSP11O75319 330 aaKnown RBP14.13□□□□□ -0.15
RABGGTA-220ENST00000560998 KRT34O76011 436 aa14.13□□□□□ -0.15
RABGGTA-220ENST00000560998 METTL18O95568 372 aa14.13□□□□□ -0.15
RABGGTA-220ENST00000560998 OXSR1O95747 527 aaPredicted RBP14.13□□□□□ -0.15
RABGGTA-220ENST00000560998 APOEP02649 317 aa14.13□□□□□ -0.15
RABGGTA-220ENST00000560998 APRTP07741 180 aa14.13□□□□□ -0.15
RABGGTA-220ENST00000560998 TFPTP0C1Z6 253 aa14.13□□□□□ -0.15
RABGGTA-220ENST00000560998 GOT1P17174 413 aa14.13□□□□□ -0.15
RABGGTA-220ENST00000560998 PTPN2P17706 415 aa14.13□□□□□ -0.15
RABGGTA-220ENST00000560998 ME2P23368 584 aa14.13□□□□□ -0.15
RABGGTA-220ENST00000560998 NUDT2P50583 147 aa14.13□□□□□ -0.15
RABGGTA-220ENST00000560998 THOP1P52888 689 aa14.13□□□□□ -0.15
RABGGTA-220ENST00000560998 RFTN1Q14699 578 aaPredicted RBP14.13□□□□□ -0.15
RABGGTA-220ENST00000560998 HERC3Q15034 1050 aa14.13□□□□□ -0.15
RABGGTA-220ENST00000560998 KIAA0319Q5VV43 1072 aa14.13□□□□□ -0.15
RABGGTA-220ENST00000560998 FRA10AC1Q70Z53 315 aa14.13□□□□□ -0.15
RABGGTA-220ENST00000560998 BNIPLQ7Z465 357 aa14.13□□□□□ -0.15
RABGGTA-220ENST00000560998 FAM131BQ86XD5 332 aa14.13□□□□□ -0.15
RABGGTA-220ENST00000560998 IFNL1Q8IU54 200 aa14.13□□□□□ -0.15
RABGGTA-220ENST00000560998 PSTKQ8IV42 348 aaKnown RBP14.13□□□□□ -0.15
RABGGTA-220ENST00000560998 PHTF2Q8N3S3 785 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms