RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 UTP6Q9NYH9 597 aaKnown RBP16.69■□□□□ 0.26
TPM1-228ENST00000560975 XPR1Q9UBH6 696 aa16.69■□□□□ 0.26
TPM1-228ENST00000560975 VANGL2Q9ULK5 521 aa16.69■□□□□ 0.26
TPM1-228ENST00000560975 SOBPA7XYQ1 873 aa16.69■□□□□ 0.26
TPM1-228ENST00000560975 MRASO14807 208 aa16.69■□□□□ 0.26
TPM1-228ENST00000560975 SPTLC1O15269 473 aa16.69■□□□□ 0.26
TPM1-228ENST00000560975 B4GALT4O60513 344 aa16.69■□□□□ 0.26
TPM1-228ENST00000560975 NOL3O60936 208 aaKnown RBP16.69■□□□□ 0.26
TPM1-228ENST00000560975 CABYRO75952 493 aa16.69■□□□□ 0.26
TPM1-228ENST00000560975 DDHD2O94830 711 aa16.69■□□□□ 0.26
TPM1-228ENST00000560975 MYF6P23409 242 aa16.69■□□□□ 0.26
TPM1-228ENST00000560975 SOX11P35716 441 aa16.69■□□□□ 0.26
TPM1-228ENST00000560975 LAMTOR4Q0VGL1 99 aa16.69■□□□□ 0.26
TPM1-228ENST00000560975 PLCL1Q15111 1095 aa16.69■□□□□ 0.26
TPM1-228ENST00000560975 PPP1R26Q5T8A7 1209 aaPredicted RBP16.69■□□□□ 0.26
TPM1-228ENST00000560975 XRRA1Q6P2D8 792 aa16.69■□□□□ 0.26
TPM1-228ENST00000560975 KCNMB4Q86W47 210 aa16.69■□□□□ 0.26
TPM1-228ENST00000560975 FAM131BQ86XD5 332 aa16.69■□□□□ 0.26
TPM1-228ENST00000560975 LPIN3Q9BQK8 851 aa16.69■□□□□ 0.26
TPM1-228ENST00000560975 MTG1Q9BT17 334 aaPredicted RBP16.69■□□□□ 0.26
TPM1-228ENST00000560975 EGFL7Q9UHF1 273 aa16.69■□□□□ 0.26
TPM1-228ENST00000560975 MID2Q9UJV3 735 aa16.69■□□□□ 0.26
TPM1-228ENST00000560975 ZCWPW2A0A1B0GU75 182 aa16.68■□□□□ 0.26
TPM1-228ENST00000560975 TRIM64CA6NLI5 447 aa16.68■□□□□ 0.26
TPM1-228ENST00000560975 LACTBL1A8MY62 500 aa16.68■□□□□ 0.26
TPM1-228ENST00000560975 SLCO1B7G3V0H7 640 aa16.68■□□□□ 0.26
TPM1-228ENST00000560975 VWA5AO00534 786 aa16.68■□□□□ 0.26
TPM1-228ENST00000560975 DPYSL4O14531 572 aa16.68■□□□□ 0.26
TPM1-228ENST00000560975 RAB15P59190 212 aa16.68■□□□□ 0.26
TPM1-228ENST00000560975 MPZL3Q6UWV2 235 aa16.68■□□□□ 0.26
TPM1-228ENST00000560975 ERMP1Q7Z2K6 904 aa16.68■□□□□ 0.26
TPM1-228ENST00000560975 CXorf38Q8TB03 319 aa16.68■□□□□ 0.26
TPM1-228ENST00000560975 ACDQ96AP0 544 aa16.68■□□□□ 0.26
TPM1-228ENST00000560975 UHRF1Q96T88 793 aaPredicted RBP16.68■□□□□ 0.26
TPM1-228ENST00000560975 MAF1Q9H063 256 aa16.68■□□□□ 0.26
TPM1-228ENST00000560975 MRPL40Q9NQ50 206 aaKnown RBP16.68■□□□□ 0.26
TPM1-228ENST00000560975 CHRAC1Q9NRG0 131 aa16.68■□□□□ 0.26
TPM1-228ENST00000560975 FAM32AQ9Y421 112 aaKnown RBP16.68■□□□□ 0.26
TPM1-228ENST00000560975 LY75O60449 1722 aa16.68■□□□□ 0.26
TPM1-228ENST00000560975 SPATA31C2B4DYI2 1134 aa16.68■□□□□ 0.26
TPM1-228ENST00000560975 SULT1C4O75897 302 aa16.68■□□□□ 0.26
TPM1-228ENST00000560975 SRP72O76094 671 aaKnown RBP16.68■□□□□ 0.26
TPM1-228ENST00000560975 BAIAP3O94812 1187 aa16.68■□□□□ 0.26
TPM1-228ENST00000560975 LRPAP1P30533 357 aa16.68■□□□□ 0.26
TPM1-228ENST00000560975 EFNA5P52803 228 aa16.68■□□□□ 0.26
TPM1-228ENST00000560975 NFATC3Q12968 1075 aa16.68■□□□□ 0.26
TPM1-228ENST00000560975 ATF7IP2Q5U623 682 aa16.68■□□□□ 0.26
TPM1-228ENST00000560975 LCLAT1Q6UWP7 414 aa16.68■□□□□ 0.26
TPM1-228ENST00000560975 CAMK1DQ8IU85 385 aa16.68■□□□□ 0.26
TPM1-228ENST00000560975 SPPL2CQ8IUH8 684 aa16.68■□□□□ 0.26
TPM1-228ENST00000560975 SLC41A1Q8IVJ1 513 aa16.68■□□□□ 0.26
TPM1-228ENST00000560975 ZBTB8OSQ8IWT0 167 aa16.68■□□□□ 0.26
TPM1-228ENST00000560975 HPDLQ96IR7 371 aa16.68■□□□□ 0.26
TPM1-228ENST00000560975 KLHL8Q9P2G9 620 aaPredicted RBP16.68■□□□□ 0.26
TPM1-228ENST00000560975 PTBP2Q9UKA9 531 aaKnown RBP16.68■□□□□ 0.26
TPM1-228ENST00000560975 CROTQ9UKG9 612 aa16.68■□□□□ 0.26
TPM1-228ENST00000560975 TLL2Q9Y6L7 1015 aa16.68■□□□□ 0.26
TPM1-228ENST00000560975 NEMP2A6NFY4 417 aa16.67■□□□□ 0.26
TPM1-228ENST00000560975 TIMM44O43615 452 aa16.67■□□□□ 0.26
TPM1-228ENST00000560975 BMP2P12643 396 aa16.67■□□□□ 0.26
TPM1-228ENST00000560975 TRAP1Q12931 704 aaKnown RBP16.67■□□□□ 0.26
TPM1-228ENST00000560975 PRPSAP1Q14558 356 aa16.67■□□□□ 0.26
TPM1-228ENST00000560975 TRIM16LQ309B1 348 aa16.67■□□□□ 0.26
TPM1-228ENST00000560975 CNSTQ6PJW8 725 aa16.67■□□□□ 0.26
TPM1-228ENST00000560975 OR2T34Q8NGX1 318 aa16.67■□□□□ 0.26
TPM1-228ENST00000560975 OR2T3Q8NH03 318 aa16.67■□□□□ 0.26
TPM1-228ENST00000560975 ZNF420Q8TAQ5 688 aaPredicted RBP16.67■□□□□ 0.26
TPM1-228ENST00000560975 PRDM12Q9H4Q4 367 aa16.67■□□□□ 0.26
TPM1-228ENST00000560975 BFARQ9NZS9 450 aa16.67■□□□□ 0.26
TPM1-228ENST00000560975 SPATA7Q9P0W8 599 aa16.67■□□□□ 0.26
TPM1-228ENST00000560975 GNPTGQ9UJJ9 305 aa16.67■□□□□ 0.26
TPM1-228ENST00000560975 MGAMO43451 1857 aa16.67■□□□□ 0.26
TPM1-228ENST00000560975 ANKRD31Q8N7Z5 1873 aa16.67■□□□□ 0.26
TPM1-228ENST00000560975 GABBR2O75899 941 aa16.67■□□□□ 0.26
TPM1-228ENST00000560975 MATN1P21941 496 aa16.67■□□□□ 0.26
TPM1-228ENST00000560975 ARL4AP40617 200 aa16.67■□□□□ 0.26
TPM1-228ENST00000560975 CD151P48509 253 aa16.67■□□□□ 0.26
TPM1-228ENST00000560975 TNK2Q07912 1038 aa16.67■□□□□ 0.26
TPM1-228ENST00000560975 SEPT6Q14141 434 aa16.67■□□□□ 0.26
TPM1-228ENST00000560975 EEPD1Q7L9B9 569 aa16.67■□□□□ 0.26
TPM1-228ENST00000560975 ACOT1Q86TX2 421 aa16.67■□□□□ 0.26
TPM1-228ENST00000560975 SHCBP1Q8NEM2 672 aa16.67■□□□□ 0.26
TPM1-228ENST00000560975 SLC7A14Q8TBB6 771 aa16.67■□□□□ 0.26
TPM1-228ENST00000560975 CASP10Q92851 521 aa16.67■□□□□ 0.26
TPM1-228ENST00000560975 TOP1MTQ969P6 601 aa16.67■□□□□ 0.26
TPM1-228ENST00000560975 TAMM41Q96BW9 452 aa16.67■□□□□ 0.26
TPM1-228ENST00000560975 LRCH3Q96II8 777 aa16.67■□□□□ 0.26
TPM1-228ENST00000560975 CDHR1Q96JP9 859 aa16.67■□□□□ 0.26
TPM1-228ENST00000560975 C1QTNF1Q9BXJ1 281 aa16.67■□□□□ 0.26
TPM1-228ENST00000560975 ZFYVE28Q9HCC9 887 aa16.67■□□□□ 0.26
TPM1-228ENST00000560975 CYP4F12Q9HCS2 524 aa16.67■□□□□ 0.26
TPM1-228ENST00000560975 EIF2B3Q9NR50 452 aaKnown RBP16.67■□□□□ 0.26
TPM1-228ENST00000560975 CD300AQ9UGN4 299 aa16.67■□□□□ 0.26
TPM1-228ENST00000560975 COL2A1P02458 1487 aaPredicted RBP16.67■□□□□ 0.26
TPM1-228ENST00000560975 UBDO15205 165 aa16.67■□□□□ 0.26
TPM1-228ENST00000560975 GPC4O75487 556 aa16.67■□□□□ 0.26
TPM1-228ENST00000560975 HSPA1AP0DMV8 641 aaKnown RBP16.67■□□□□ 0.26
TPM1-228ENST00000560975 HSPA1BP0DMV9 641 aaKnown RBP16.67■□□□□ 0.26
TPM1-228ENST00000560975 EEF1B2P24534 225 aaKnown RBP16.67■□□□□ 0.26
TPM1-228ENST00000560975 EN1Q05925 392 aaPredicted RBP16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms