RNA–Protein interactions for RNA: ENST00000560634.1

CSPG4P11-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 11, humanhuman

BASIC

Gene CSPG4P11, Length 4,910 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P11-201ENST00000560634 OR12D3Q9UGF7 316 aa13.34□□□□□ -0.27
CSPG4P11-201ENST00000560634 FAM50BQ9Y247 325 aa13.34□□□□□ -0.27
CSPG4P11-201ENST00000560634 SETBP1Q9Y6X0 1596 aa13.34□□□□□ -0.27
CSPG4P11-201ENST00000560634 CCDC162PA2VCL2 907 aa13.34□□□□□ -0.27
CSPG4P11-201ENST00000560634 CSDE1O75534 798 aaKnown RBP13.34□□□□□ -0.27
CSPG4P11-201ENST00000560634 WEE1P30291 646 aa13.34□□□□□ -0.27
CSPG4P11-201ENST00000560634 TGFBR2P37173 567 aa13.34□□□□□ -0.27
CSPG4P11-201ENST00000560634 SOX10P56693 466 aa13.34□□□□□ -0.27
CSPG4P11-201ENST00000560634 BNC1Q01954 994 aa13.34□□□□□ -0.27
CSPG4P11-201ENST00000560634 QPRTQ15274 297 aa13.34□□□□□ -0.27
CSPG4P11-201ENST00000560634 FAM171A1Q5VUB5 890 aa13.34□□□□□ -0.27
CSPG4P11-201ENST00000560634 SPESP1Q6UW49 350 aa13.34□□□□□ -0.27
CSPG4P11-201ENST00000560634 POLNQ7Z5Q5 900 aa13.34□□□□□ -0.27
CSPG4P11-201ENST00000560634 AP3S1Q92572 193 aa13.34□□□□□ -0.27
CSPG4P11-201ENST00000560634 TCF12Q99081 682 aa13.34□□□□□ -0.27
CSPG4P11-201ENST00000560634 EPB41L1Q9H4G0 881 aa13.34□□□□□ -0.27
CSPG4P11-201ENST00000560634 C8orf4Q9NR00 106 aa13.34□□□□□ -0.27
CSPG4P11-201ENST00000560634 ADARB2Q9NS39 739 aaKnown RBP13.34□□□□□ -0.27
CSPG4P11-201ENST00000560634 CCDC182A6NF36 153 aa13.34□□□□□ -0.27
CSPG4P11-201ENST00000560634 IL1R1P14778 569 aa13.34□□□□□ -0.27
CSPG4P11-201ENST00000560634 ANPEPP15144 967 aa13.34□□□□□ -0.27
CSPG4P11-201ENST00000560634 RPL22P35268 128 aaKnown RBP13.34□□□□□ -0.27
CSPG4P11-201ENST00000560634 SLC12A3P55017 1021 aa13.34□□□□□ -0.27
CSPG4P11-201ENST00000560634 ATP6V0D1P61421 351 aa13.34□□□□□ -0.27
CSPG4P11-201ENST00000560634 MAMLD1Q13495 774 aa13.34□□□□□ -0.27
CSPG4P11-201ENST00000560634 TXNDC11Q6PKC3 985 aa13.34□□□□□ -0.27
CSPG4P11-201ENST00000560634 POC5Q8NA72 575 aa13.34□□□□□ -0.27
CSPG4P11-201ENST00000560634 OR52K1Q8NGK4 314 aa13.34□□□□□ -0.27
CSPG4P11-201ENST00000560634 MBOAT7Q96N66 472 aa13.34□□□□□ -0.27
CSPG4P11-201ENST00000560634 RNF157Q96PX1 679 aa13.34□□□□□ -0.27
CSPG4P11-201ENST00000560634 ACE2Q9BYF1 805 aaPredicted RBP13.34□□□□□ -0.27
CSPG4P11-201ENST00000560634 MARCH2Q9P0N8 246 aa13.34□□□□□ -0.27
CSPG4P11-201ENST00000560634 GNPTGQ9UJJ9 305 aa13.34□□□□□ -0.27
CSPG4P11-201ENST00000560634 SH3GLB1Q9Y371 365 aa13.34□□□□□ -0.27
CSPG4P11-201ENST00000560634 SPATA31A6Q5VVP1 1343 aa13.33□□□□□ -0.28
CSPG4P11-201ENST00000560634 FAM237AA0A1B0GTK4 181 aa13.33□□□□□ -0.28
CSPG4P11-201ENST00000560634 SLC28A1O00337 649 aa13.33□□□□□ -0.28
CSPG4P11-201ENST00000560634 PPIBP23284 216 aaKnown RBP13.33□□□□□ -0.28
CSPG4P11-201ENST00000560634 MAPK10P53779 464 aa13.33□□□□□ -0.28
CSPG4P11-201ENST00000560634 LGALS3BPQ08380 585 aa13.33□□□□□ -0.28
CSPG4P11-201ENST00000560634 PAGE2Q7Z2X7 111 aa13.33□□□□□ -0.28
CSPG4P11-201ENST00000560634 ART4Q93070 314 aa13.33□□□□□ -0.28
CSPG4P11-201ENST00000560634 SKA1Q96BD8 255 aa13.33□□□□□ -0.28
CSPG4P11-201ENST00000560634 GALNT8Q9NY28 637 aa13.33□□□□□ -0.28
CSPG4P11-201ENST00000560634 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.33□□□□□ -0.28
CSPG4P11-201ENST00000560634 IKZF3Q9UKT9 509 aa13.33□□□□□ -0.28
CSPG4P11-201ENST00000560634 HIST1H2ABP04908 130 aa13.33□□□□□ -0.28
CSPG4P11-201ENST00000560634 ZSCAN5DPP0CG00 497 aa13.33□□□□□ -0.28
CSPG4P11-201ENST00000560634 PSMB4P28070 264 aa13.33□□□□□ -0.28
CSPG4P11-201ENST00000560634 ZNHIT3Q15649 155 aaPredicted RBP13.33□□□□□ -0.28
CSPG4P11-201ENST00000560634 TMEM63BQ5T3F8 832 aa13.33□□□□□ -0.28
CSPG4P11-201ENST00000560634 ARHGAP36Q6ZRI8 547 aa13.33□□□□□ -0.28
CSPG4P11-201ENST00000560634 HIST3H2AQ7L7L0 130 aa13.33□□□□□ -0.28
CSPG4P11-201ENST00000560634 ADAMTSL2Q86TH1 951 aa13.33□□□□□ -0.28
CSPG4P11-201ENST00000560634 ADAM32Q8TC27 787 aa13.33□□□□□ -0.28
CSPG4P11-201ENST00000560634 DNAJB3Q8WWF6 145 aa13.33□□□□□ -0.28
CSPG4P11-201ENST00000560634 HIST1H2ACQ93077 130 aa13.33□□□□□ -0.28
CSPG4P11-201ENST00000560634 TRMOQ9BU70 441 aa13.33□□□□□ -0.28
CSPG4P11-201ENST00000560634 SPG21Q9NZD8 308 aa13.33□□□□□ -0.28
CSPG4P11-201ENST00000560634 MORF4L1Q9UBU8 362 aa13.33□□□□□ -0.28
CSPG4P11-201ENST00000560634 NCANO14594 1321 aa13.33□□□□□ -0.28
CSPG4P11-201ENST00000560634 PEX11AO75192 247 aa13.33□□□□□ -0.28
CSPG4P11-201ENST00000560634 ERBB2P04626 1255 aa13.33□□□□□ -0.28
CSPG4P11-201ENST00000560634 SHMT1P34896 483 aa13.33□□□□□ -0.28
CSPG4P11-201ENST00000560634 GRIA4P48058 902 aa13.33□□□□□ -0.28
CSPG4P11-201ENST00000560634 NR1D2Q14995 579 aa13.33□□□□□ -0.28
CSPG4P11-201ENST00000560634 DENND5AQ6IQ26 1287 aa13.33□□□□□ -0.28
CSPG4P11-201ENST00000560634 FAM220AQ7Z4H9 259 aa13.33□□□□□ -0.28
CSPG4P11-201ENST00000560634 LRRN4CLQ8ND94 238 aa13.33□□□□□ -0.28
CSPG4P11-201ENST00000560634 ZNF540Q8NDQ6 660 aa13.33□□□□□ -0.28
CSPG4P11-201ENST00000560634 CD101Q93033 1021 aa13.33□□□□□ -0.28
CSPG4P11-201ENST00000560634 MLPHQ9BV36 600 aaPredicted RBP13.33□□□□□ -0.28
CSPG4P11-201ENST00000560634 CHID1Q9BWS9 393 aa13.33□□□□□ -0.28
CSPG4P11-201ENST00000560634 SCAF8Q9UPN6 1271 aaKnown RBP13.33□□□□□ -0.28
CSPG4P11-201ENST00000560634 ADGRB3O60242 1522 aa13.33□□□□□ -0.28
CSPG4P11-201ENST00000560634 DLC1Q96QB1 1528 aa13.33□□□□□ -0.28
CSPG4P11-201ENST00000560634 KPNA3O00505 521 aaPredicted RBP13.32□□□□□ -0.28
CSPG4P11-201ENST00000560634 TRAFD1O14545 582 aaPredicted RBP13.32□□□□□ -0.28
CSPG4P11-201ENST00000560634 NTRK1P04629 796 aa13.32□□□□□ -0.28
CSPG4P11-201ENST00000560634 TFEBP19484 476 aa13.32□□□□□ -0.28
CSPG4P11-201ENST00000560634 NFKB1P19838 968 aa13.32□□□□□ -0.28
CSPG4P11-201ENST00000560634 METTL3Q86U44 580 aaKnown RBP13.32□□□□□ -0.28
CSPG4P11-201ENST00000560634 SLC9A9Q8IVB4 645 aa13.32□□□□□ -0.28
CSPG4P11-201ENST00000560634 CYP2W1Q8TAV3 490 aa13.32□□□□□ -0.28
CSPG4P11-201ENST00000560634 EBNA1BP2Q99848 306 aaKnown RBP13.32□□□□□ -0.28
CSPG4P11-201ENST00000560634 ZNF670Q9BS34 389 aa13.32□□□□□ -0.28
CSPG4P11-201ENST00000560634 TRIT1Q9H3H1 467 aaKnown RBP13.32□□□□□ -0.28
CSPG4P11-201ENST00000560634 SMPD4Q9NXE4 827 aa13.32□□□□□ -0.28
CSPG4P11-201ENST00000560634 PTGFRNQ9P2B2 879 aa13.32□□□□□ -0.28
CSPG4P11-201ENST00000560634 ING4Q9UNL4 249 aa13.32□□□□□ -0.28
CSPG4P11-201ENST00000560634 TMCC2O75069 709 aa13.32□□□□□ -0.28
CSPG4P11-201ENST00000560634 CABYRO75952 493 aa13.32□□□□□ -0.28
CSPG4P11-201ENST00000560634 TRUB2O95900 331 aaKnown RBP13.32□□□□□ -0.28
CSPG4P11-201ENST00000560634 PRG2P13727 222 aa13.32□□□□□ -0.28
CSPG4P11-201ENST00000560634 RAB25P57735 213 aa13.32□□□□□ -0.28
CSPG4P11-201ENST00000560634 TCEA2Q15560 299 aa13.32□□□□□ -0.28
CSPG4P11-201ENST00000560634 AFTPHQ6ULP2 937 aa13.32□□□□□ -0.28
CSPG4P11-201ENST00000560634 HIPK1Q86Z02 1210 aa13.32□□□□□ -0.28
CSPG4P11-201ENST00000560634 FAM71AQ8IYT1 594 aa13.32□□□□□ -0.28
CSPG4P11-201ENST00000560634 LRRC17Q8N6Y2 441 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms