RNA–Protein interactions for RNA: ENST00000560565.1

CCDC33-209, Transcript of coiled-coil domain containing 33, humanhuman

TSL 1 (best)

Gene CCDC33, Length 1,275 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-209ENST00000560565 ZNF252P-AS1Q0IIN9 211 aa8.68□□□□□ -1.02
CCDC33-209ENST00000560565 KLF10Q13118 480 aa8.68□□□□□ -1.02
CCDC33-209ENST00000560565 MSLNQ13421 630 aaPredicted RBP8.68□□□□□ -1.02
CCDC33-209ENST00000560565 UBAP2LQ14157 1087 aaKnown RBP8.68□□□□□ -1.02
CCDC33-209ENST00000560565 ZBTB6Q15916 424 aa8.68□□□□□ -1.02
CCDC33-209ENST00000560565 UGP2Q16851 508 aa8.68□□□□□ -1.02
CCDC33-209ENST00000560565 SEZ6Q53EL9 994 aa8.68□□□□□ -1.02
CCDC33-209ENST00000560565 UBXN11Q5T124 520 aa8.68□□□□□ -1.02
CCDC33-209ENST00000560565 N4BP2L1Q5TBK1 243 aaPredicted RBP8.68□□□□□ -1.02
CCDC33-209ENST00000560565 SEL1L3Q68CR1 1132 aa8.68□□□□□ -1.02
CCDC33-209ENST00000560565 LMBRD2Q68DH5 695 aaPredicted RBP8.68□□□□□ -1.02
CCDC33-209ENST00000560565 HEATR6Q6AI08 1181 aaKnown RBP8.68□□□□□ -1.02
CCDC33-209ENST00000560565 SLC9A4Q6AI14 798 aa8.68□□□□□ -1.02
CCDC33-209ENST00000560565 PRMT9Q6P2P2 845 aa8.68□□□□□ -1.02
CCDC33-209ENST00000560565 LRRC8BQ6P9F7 803 aa8.68□□□□□ -1.02
CCDC33-209ENST00000560565 EPGNQ6UW88 154 aa8.68□□□□□ -1.02
CCDC33-209ENST00000560565 ALKAL1Q6UXT8 129 aa8.68□□□□□ -1.02
CCDC33-209ENST00000560565 UNC5AQ6ZN44 842 aa8.68□□□□□ -1.02
CCDC33-209ENST00000560565 LINC00299Q6ZSB3 139 aa8.68□□□□□ -1.02
CCDC33-209ENST00000560565 LPCAT2Q7L5N7 544 aa8.68□□□□□ -1.02
CCDC33-209ENST00000560565 UNC45BQ8IWX7 931 aa8.68□□□□□ -1.02
CCDC33-209ENST00000560565 LRRC52Q8N7C0 313 aa8.68□□□□□ -1.02
CCDC33-209ENST00000560565 DDHD1Q8NEL9 900 aa8.68□□□□□ -1.02
CCDC33-209ENST00000560565 BEST2Q8NFU1 509 aa8.68□□□□□ -1.02
CCDC33-209ENST00000560565 CEP70Q8NHQ1 597 aa8.68□□□□□ -1.02
CCDC33-209ENST00000560565 SP7Q8TDD2 431 aaPredicted RBP8.68□□□□□ -1.02
CCDC33-209ENST00000560565 GAB3Q8WWW8 586 aa8.68□□□□□ -1.02
CCDC33-209ENST00000560565 POP5Q969H6 163 aaKnown RBP8.68□□□□□ -1.02
CCDC33-209ENST00000560565 EME1Q96AY2 570 aa8.68□□□□□ -1.02
CCDC33-209ENST00000560565 ASB9Q96DX5 294 aa8.68□□□□□ -1.02
CCDC33-209ENST00000560565 DUS3LQ96G46 650 aaKnown RBP8.68□□□□□ -1.02
CCDC33-209ENST00000560565 TUBA1CQ9BQE3 449 aa8.68□□□□□ -1.02
CCDC33-209ENST00000560565 MTMR12Q9C0I1 747 aa8.68□□□□□ -1.02
CCDC33-209ENST00000560565 BRD8Q9H0E9 1235 aa8.68□□□□□ -1.02
CCDC33-209ENST00000560565 MUC13Q9H3R2 512 aa8.68□□□□□ -1.02
CCDC33-209ENST00000560565 EPHX3Q9H6B9 360 aa8.68□□□□□ -1.02
CCDC33-209ENST00000560565 USP29Q9HBJ7 922 aa8.68□□□□□ -1.02
CCDC33-209ENST00000560565 CD320Q9NPF0 282 aa8.68□□□□□ -1.02
CCDC33-209ENST00000560565 KLHL11Q9NVR0 708 aa8.68□□□□□ -1.02
CCDC33-209ENST00000560565 RRN3Q9NYV6 651 aa8.68□□□□□ -1.02
CCDC33-209ENST00000560565 SCHIP1Q9P0W5 487 aaPredicted RBP8.68□□□□□ -1.02
CCDC33-209ENST00000560565 LRFN2Q9ULH4 789 aa8.68□□□□□ -1.02
CCDC33-209ENST00000560565 UBQLN1Q9UMX0 589 aaKnown RBP8.68□□□□□ -1.02
CCDC33-209ENST00000560565 CDYLQ9Y232 598 aa8.68□□□□□ -1.02
CCDC33-209ENST00000560565 SH3BP1Q9Y3L3 701 aa8.68□□□□□ -1.02
CCDC33-209ENST00000560565 RAP2CQ9Y3L5 183 aa8.68□□□□□ -1.02
CCDC33-209ENST00000560565 WDFY4Q6ZS81 3184 aa8.67□□□□□ -1.02
CCDC33-209ENST00000560565 KANSL1LA0AUZ9 987 aa8.67□□□□□ -1.02
CCDC33-209ENST00000560565 EPOPA6NHQ4 379 aa8.67□□□□□ -1.02
CCDC33-209ENST00000560565 PSMD3O43242 534 aa8.67□□□□□ -1.02
CCDC33-209ENST00000560565 TRIM13O60858 407 aa8.67□□□□□ -1.02
CCDC33-209ENST00000560565 FAM163BP0C2L3 166 aa8.67□□□□□ -1.02
CCDC33-209ENST00000560565 FGF3P11487 239 aaPredicted RBP8.67□□□□□ -1.02
CCDC33-209ENST00000560565 CD19P15391 556 aa8.67□□□□□ -1.02
CCDC33-209ENST00000560565 POU3F3P20264 500 aaPredicted RBP8.67□□□□□ -1.02
CCDC33-209ENST00000560565 TYK2P29597 1187 aa8.67□□□□□ -1.02
CCDC33-209ENST00000560565 MIPP30301 263 aa8.67□□□□□ -1.02
CCDC33-209ENST00000560565 RFC1P35251 1148 aaPredicted RBP8.67□□□□□ -1.02
CCDC33-209ENST00000560565 PNPLA4P41247 253 aa8.67□□□□□ -1.02
CCDC33-209ENST00000560565 NUDT2P50583 147 aa8.67□□□□□ -1.02
CCDC33-209ENST00000560565 ZNF135P52742 658 aaPredicted RBP8.67□□□□□ -1.02
CCDC33-209ENST00000560565 GDF10P55107 478 aa8.67□□□□□ -1.02
CCDC33-209ENST00000560565 OSTNP61366 133 aa8.67□□□□□ -1.02
CCDC33-209ENST00000560565 TUBB3Q13509 450 aa8.67□□□□□ -1.02
CCDC33-209ENST00000560565 TLR1Q15399 786 aa8.67□□□□□ -1.02
CCDC33-209ENST00000560565 CCDC85BQ15834 202 aaPredicted RBP8.67□□□□□ -1.02
CCDC33-209ENST00000560565 MAP7D1Q3KQU3 841 aa8.67□□□□□ -1.02
CCDC33-209ENST00000560565 ATP13A4Q4VNC1 1196 aa8.67□□□□□ -1.02
CCDC33-209ENST00000560565 ZNF667Q5HYK9 610 aa8.67□□□□□ -1.02
CCDC33-209ENST00000560565 TMEM31Q5JXX7 168 aa8.67□□□□□ -1.02
CCDC33-209ENST00000560565 MROH9Q5TGP6 573 aa8.67□□□□□ -1.02
CCDC33-209ENST00000560565 LPCAT4Q643R3 524 aa8.67□□□□□ -1.02
CCDC33-209ENST00000560565 TWF2Q6IBS0 349 aaKnown RBP8.67□□□□□ -1.02
CCDC33-209ENST00000560565 GRAMD4Q6IC98 578 aa8.67□□□□□ -1.02
CCDC33-209ENST00000560565 JADE1Q6IE81 842 aa8.67□□□□□ -1.02
CCDC33-209ENST00000560565 RFX8Q6ZV50 586 aa8.67□□□□□ -1.02
CCDC33-209ENST00000560565 SLC24A5Q71RS6 500 aa8.67□□□□□ -1.02
CCDC33-209ENST00000560565 FKBP9P1Q75LS8 142 aa8.67□□□□□ -1.02
CCDC33-209ENST00000560565 SPRED2Q7Z698 418 aa8.67□□□□□ -1.02
CCDC33-209ENST00000560565 MRPL10Q7Z7H8 261 aaKnown RBP8.67□□□□□ -1.02
CCDC33-209ENST00000560565 NLRC5Q86WI3 1866 aa8.67□□□□□ -1.02
CCDC33-209ENST00000560565 CDR2LQ86X02 465 aaPredicted RBP8.67□□□□□ -1.02
CCDC33-209ENST00000560565 TICAM1Q8IUC6 712 aa8.67□□□□□ -1.02
CCDC33-209ENST00000560565 NPAS4Q8IUM7 802 aa8.67□□□□□ -1.02
CCDC33-209ENST00000560565 HOMEZQ8IX15 550 aa8.67□□□□□ -1.02
CCDC33-209ENST00000560565 TMEM192Q8IY95 271 aa8.67□□□□□ -1.02
CCDC33-209ENST00000560565 FIBCD1Q8N539 461 aa8.67□□□□□ -1.02
CCDC33-209ENST00000560565 C1orf127Q8N9H9 656 aa8.67□□□□□ -1.02
CCDC33-209ENST00000560565 LEMD2Q8NC56 503 aa8.67□□□□□ -1.02
CCDC33-209ENST00000560565 LINC01599Q8WXQ3 324 aa8.67□□□□□ -1.02
CCDC33-209ENST00000560565 HSPH1Q92598 858 aa8.67□□□□□ -1.02
CCDC33-209ENST00000560565 CCDC124Q96CT7 223 aaKnown RBP8.67□□□□□ -1.02
CCDC33-209ENST00000560565 PGBD4Q96DM1 585 aa8.67□□□□□ -1.02
CCDC33-209ENST00000560565 CCDC126Q96EE4 140 aa8.67□□□□□ -1.02
CCDC33-209ENST00000560565 KIF12Q96FN5 646 aa8.67□□□□□ -1.02
CCDC33-209ENST00000560565 DCHS1Q96JQ0 3298 aa8.67□□□□□ -1.02
CCDC33-209ENST00000560565 ZNF597Q96LX8 424 aa8.67□□□□□ -1.02
CCDC33-209ENST00000560565 SAMD11Q96NU1 681 aa8.67□□□□□ -1.02
CCDC33-209ENST00000560565 GCNAQ96QF7 691 aa8.67□□□□□ -1.02
CCDC33-209ENST00000560565 PRPF18Q99633 342 aaKnown RBP8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms