RNA–Protein interactions for RNA: ENST00000560463.5

TRAF3-209, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-209ENST00000560463 CYTH1Q15438 398 aa8.73□□□□□ -1.01
TRAF3-209ENST00000560463 HSP90B2PQ58FF3 399 aa8.73□□□□□ -1.01
TRAF3-209ENST00000560463 SYCP2LQ5T4T6 812 aa8.73□□□□□ -1.01
TRAF3-209ENST00000560463 PRPF38BQ5VTL8 546 aaKnown RBP8.73□□□□□ -1.01
TRAF3-209ENST00000560463 VITQ6UXI7 678 aa8.73□□□□□ -1.01
TRAF3-209ENST00000560463 RANBP10Q6VN20 620 aa8.73□□□□□ -1.01
TRAF3-209ENST00000560463 CYS1Q717R9 158 aa8.73□□□□□ -1.01
TRAF3-209ENST00000560463 PRPF39Q86UA1 669 aaKnown RBP8.73□□□□□ -1.01
TRAF3-209ENST00000560463 ANKMY2Q8IV38 441 aa8.73□□□□□ -1.01
TRAF3-209ENST00000560463 APCDD1Q8J025 514 aa8.73□□□□□ -1.01
TRAF3-209ENST00000560463 PGBD5Q8N414 524 aa8.73□□□□□ -1.01
TRAF3-209ENST00000560463 CPA6Q8N4T0 437 aa8.73□□□□□ -1.01
TRAF3-209ENST00000560463 GOLGA6L1Q8N7Z2 621 aa8.73□□□□□ -1.01
TRAF3-209ENST00000560463 DNAAF3Q8N9W5 541 aa8.73□□□□□ -1.01
TRAF3-209ENST00000560463 FBXO36Q8NEA4 188 aa8.73□□□□□ -1.01
TRAF3-209ENST00000560463 SPATA22Q8NHS9 363 aa8.73□□□□□ -1.01
TRAF3-209ENST00000560463 ARRDC2Q8TBH0 407 aa8.73□□□□□ -1.01
TRAF3-209ENST00000560463 SUSD6Q92537 303 aa8.73□□□□□ -1.01
TRAF3-209ENST00000560463 TTC17Q96AE7 1141 aa8.73□□□□□ -1.01
TRAF3-209ENST00000560463 ISG20Q96AZ6 181 aaKnown RBP8.73□□□□□ -1.01
TRAF3-209ENST00000560463 OXNAD1Q96HP4 312 aaPredicted RBP8.73□□□□□ -1.01
TRAF3-209ENST00000560463 ZNF419Q96HQ0 510 aaPredicted RBP8.73□□□□□ -1.01
TRAF3-209ENST00000560463 MRGPRX2Q96LB1 330 aa8.73□□□□□ -1.01
TRAF3-209ENST00000560463 C9orf72Q96LT7 481 aa8.73□□□□□ -1.01
TRAF3-209ENST00000560463 PWWP2AQ96N64 755 aa8.73□□□□□ -1.01
TRAF3-209ENST00000560463 EBNA1BP2Q99848 306 aaKnown RBP8.73□□□□□ -1.01
TRAF3-209ENST00000560463 SEMA3CQ99985 751 aa8.73□□□□□ -1.01
TRAF3-209ENST00000560463 TMEM109Q9BVC6 243 aa8.73□□□□□ -1.01
TRAF3-209ENST00000560463 FSD1LQ9BXM9 530 aa8.73□□□□□ -1.01
TRAF3-209ENST00000560463 POMKQ9H5K3 350 aa8.73□□□□□ -1.01
TRAF3-209ENST00000560463 ECT2Q9H8V3 914 aa8.73□□□□□ -1.01
TRAF3-209ENST00000560463 LRRC4CQ9HCJ2 640 aa8.73□□□□□ -1.01
TRAF3-209ENST00000560463 MED4Q9NPJ6 270 aa8.73□□□□□ -1.01
TRAF3-209ENST00000560463 DNAJC17Q9NVM6 304 aaKnown RBP8.73□□□□□ -1.01
TRAF3-209ENST00000560463 EPS15L1Q9UBC2 864 aa8.73□□□□□ -1.01
TRAF3-209ENST00000560463 FETUBQ9UGM5 382 aa8.73□□□□□ -1.01
TRAF3-209ENST00000560463 INTS6Q9UL03 887 aaKnown RBP8.73□□□□□ -1.01
TRAF3-209ENST00000560463 CLEC4EQ9ULY5 219 aa8.73□□□□□ -1.01
TRAF3-209ENST00000560463 HS3ST2Q9Y278 367 aa8.73□□□□□ -1.01
TRAF3-209ENST00000560463 NFS1Q9Y697 457 aa8.73□□□□□ -1.01
TRAF3-209ENST00000560463 TRPM6Q9BX84 2022 aa8.72□□□□□ -1.01
TRAF3-209ENST00000560463 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.72□□□□□ -1.01
TRAF3-209ENST00000560463 LOC285095A0A1B0GVY8 99 aa8.72□□□□□ -1.01
TRAF3-209ENST00000560463 GOLGA6L10A6NI86 522 aa8.72□□□□□ -1.01
TRAF3-209ENST00000560463 F5H423 210 aaPredicted RBP8.72□□□□□ -1.01
TRAF3-209ENST00000560463 INSIG1O15503 277 aa8.72□□□□□ -1.01
TRAF3-209ENST00000560463 SNAP91O60641 907 aa8.72□□□□□ -1.01
TRAF3-209ENST00000560463 AVILO75366 819 aa8.72□□□□□ -1.01
TRAF3-209ENST00000560463 PMPCBO75439 489 aa8.72□□□□□ -1.01
TRAF3-209ENST00000560463 TCEA3O75764 348 aa8.72□□□□□ -1.01
TRAF3-209ENST00000560463 TMCC1O94876 653 aa8.72□□□□□ -1.01
TRAF3-209ENST00000560463 ACSL3O95573 720 aa8.72□□□□□ -1.01
TRAF3-209ENST00000560463 CPP00450 1065 aa8.72□□□□□ -1.01
TRAF3-209ENST00000560463 ASLP04424 464 aa8.72□□□□□ -1.01
TRAF3-209ENST00000560463 SRPRAP08240 638 aaKnown RBP8.72□□□□□ -1.01
TRAF3-209ENST00000560463 MMP2P08253 660 aa8.72□□□□□ -1.01
TRAF3-209ENST00000560463 POLR2EP19388 210 aaKnown RBP8.72□□□□□ -1.01
TRAF3-209ENST00000560463 HLA-DPA1P20036 260 aa8.72□□□□□ -1.01
TRAF3-209ENST00000560463 CA4P22748 312 aa8.72□□□□□ -1.01
TRAF3-209ENST00000560463 EIF2DP41214 584 aaKnown RBP8.72□□□□□ -1.01
TRAF3-209ENST00000560463 CD86P42081 329 aa8.72□□□□□ -1.01
TRAF3-209ENST00000560463 GRIA1P42261 906 aa8.72□□□□□ -1.01
TRAF3-209ENST00000560463 MAXP61244 160 aa8.72□□□□□ -1.01
TRAF3-209ENST00000560463 RHOAP61586 193 aa8.72□□□□□ -1.01
TRAF3-209ENST00000560463 AP1S1P61966 158 aa8.72□□□□□ -1.01
TRAF3-209ENST00000560463 SKOR1P84550 965 aa8.72□□□□□ -1.01
TRAF3-209ENST00000560463 ECT2LQ008S8 904 aa8.72□□□□□ -1.01
TRAF3-209ENST00000560463 DSC2Q02487 901 aa8.72□□□□□ -1.01
TRAF3-209ENST00000560463 NIPAL4Q0D2K0 466 aa8.72□□□□□ -1.01
TRAF3-209ENST00000560463 LAMB3Q13751 1172 aa8.72□□□□□ -1.01
TRAF3-209ENST00000560463 RUNX3Q13761 415 aa8.72□□□□□ -1.01
TRAF3-209ENST00000560463 FASTKD3Q14CZ7 662 aaKnown RBP8.72□□□□□ -1.01
TRAF3-209ENST00000560463 E2F5Q15329 346 aa8.72□□□□□ -1.01
TRAF3-209ENST00000560463 FAM182AQ5T1J6 154 aa8.72□□□□□ -1.01
TRAF3-209ENST00000560463 KDELC1Q6UW63 502 aa8.72□□□□□ -1.01
TRAF3-209ENST00000560463 LEKR1Q6ZMV7 388 aa8.72□□□□□ -1.01
TRAF3-209ENST00000560463 C3orf62Q6ZUJ4 267 aa8.72□□□□□ -1.01
TRAF3-209ENST00000560463 NUDT18Q6ZVK8 323 aa8.72□□□□□ -1.01
TRAF3-209ENST00000560463 PLPP6Q8IY26 295 aa8.72□□□□□ -1.01
TRAF3-209ENST00000560463 SH2D3CQ8N5H7 860 aa8.72□□□□□ -1.01
TRAF3-209ENST00000560463 IPMKQ8NFU5 416 aa8.72□□□□□ -1.01
TRAF3-209ENST00000560463 OR52K1Q8NGK4 314 aa8.72□□□□□ -1.01
TRAF3-209ENST00000560463 PTCD2Q8WV60 388 aaKnown RBP8.72□□□□□ -1.01
TRAF3-209ENST00000560463 STAMBPL1Q96FJ0 436 aa8.72□□□□□ -1.01
TRAF3-209ENST00000560463 FEM1CQ96JP0 617 aa8.72□□□□□ -1.01
TRAF3-209ENST00000560463 TRMT61BQ9BVS5 477 aaKnown RBP8.72□□□□□ -1.01
TRAF3-209ENST00000560463 CEP44Q9C0F1 390 aa8.72□□□□□ -1.01
TRAF3-209ENST00000560463 EBF3Q9H4W6 596 aa8.72□□□□□ -1.01
TRAF3-209ENST00000560463 VPS37BQ9H9H4 285 aa8.72□□□□□ -1.01
TRAF3-209ENST00000560463 SCUBE2Q9NQ36 999 aa8.72□□□□□ -1.01
TRAF3-209ENST00000560463 UBP1Q9NZI7 540 aa8.72□□□□□ -1.01
TRAF3-209ENST00000560463 SAMD15Q9P1V8 674 aa8.72□□□□□ -1.01
TRAF3-209ENST00000560463 LHX3Q9UBR4 397 aa8.72□□□□□ -1.01
TRAF3-209ENST00000560463 ZC3H7BQ9UGR2 993 aaKnown RBP8.72□□□□□ -1.01
TRAF3-209ENST00000560463 CDH22Q9UJ99 828 aa8.72□□□□□ -1.01
TRAF3-209ENST00000560463 CHMP2BQ9UQN3 213 aa8.72□□□□□ -1.01
TRAF3-209ENST00000560463 ANKRD12Q6UB98 2062 aa8.72□□□□□ -1.01
TRAF3-209ENST00000560463 DOCK9Q9BZ29 2069 aa8.72□□□□□ -1.01
TRAF3-209ENST00000560463 F5P12259 2224 aa8.72□□□□□ -1.01
TRAF3-209ENST00000560463 XIRP2A4UGR9 3374 aa8.71□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms