RNA–Protein interactions for RNA: ENST00000560207.1

RABGGTA-215, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-215ENST00000560207 DYNLT1P63172 113 aa12.23□□□□□ -0.45
RABGGTA-215ENST00000560207 AP1B1Q10567 949 aa12.23□□□□□ -0.45
RABGGTA-215ENST00000560207 NOMO1Q15155 1222 aa12.23□□□□□ -0.45
RABGGTA-215ENST00000560207 CYTH1Q15438 398 aa12.23□□□□□ -0.45
RABGGTA-215ENST00000560207 ELF2Q15723 593 aa12.23□□□□□ -0.45
RABGGTA-215ENST00000560207 SLC14A2Q15849 920 aa12.23□□□□□ -0.45
RABGGTA-215ENST00000560207 HEATR6Q6AI08 1181 aaKnown RBP12.23□□□□□ -0.45
RABGGTA-215ENST00000560207 ALG1LQ6GMV1 187 aa12.23□□□□□ -0.45
RABGGTA-215ENST00000560207 NEK5Q6P3R8 708 aa12.23□□□□□ -0.45
RABGGTA-215ENST00000560207 DPY19L3Q6ZPD9 716 aa12.23□□□□□ -0.45
RABGGTA-215ENST00000560207 SRLQ86TD4 932 aa12.23□□□□□ -0.45
RABGGTA-215ENST00000560207 NDUFAF2Q8N183 169 aa12.23□□□□□ -0.45
RABGGTA-215ENST00000560207 STK40Q8N2I9 435 aa12.23□□□□□ -0.45
RABGGTA-215ENST00000560207 RYBPQ8N488 228 aaPredicted RBP12.23□□□□□ -0.45
RABGGTA-215ENST00000560207 CADM4Q8NFZ8 388 aa12.23□□□□□ -0.45
RABGGTA-215ENST00000560207 PIP4K2CQ8TBX8 421 aa12.23□□□□□ -0.45
RABGGTA-215ENST00000560207 SPOCK2Q92563 424 aa12.23□□□□□ -0.45
RABGGTA-215ENST00000560207 ATOH1Q92858 354 aaPredicted RBP12.23□□□□□ -0.45
RABGGTA-215ENST00000560207 FOXJ1Q92949 421 aa12.23□□□□□ -0.45
RABGGTA-215ENST00000560207 LRRC45Q96CN5 670 aa12.23□□□□□ -0.45
RABGGTA-215ENST00000560207 ZC3H10Q96K80 434 aaKnown RBP12.23□□□□□ -0.45
RABGGTA-215ENST00000560207 NUDCD1Q96RS6 583 aa12.23□□□□□ -0.45
RABGGTA-215ENST00000560207 IL12RB2Q99665 862 aa12.23□□□□□ -0.45
RABGGTA-215ENST00000560207 MGME1Q9BQP7 344 aa12.23□□□□□ -0.45
RABGGTA-215ENST00000560207 TLR10Q9BXR5 811 aa12.23□□□□□ -0.45
RABGGTA-215ENST00000560207 HDAC8Q9BY41 377 aa12.23□□□□□ -0.45
RABGGTA-215ENST00000560207 BTBD1Q9H0C5 482 aa12.23□□□□□ -0.45
RABGGTA-215ENST00000560207 ZDHHC4Q9NPG8 344 aa12.23□□□□□ -0.45
RABGGTA-215ENST00000560207 TRMT1Q9NXH9 659 aaKnown RBP12.23□□□□□ -0.45
RABGGTA-215ENST00000560207 TTC7AQ9ULT0 858 aaPredicted RBP12.23□□□□□ -0.45
RABGGTA-215ENST00000560207 FCF1Q9Y324 198 aaKnown RBP12.23□□□□□ -0.45
RABGGTA-215ENST00000560207 LRRC72A6NJI9 287 aa12.22□□□□□ -0.45
RABGGTA-215ENST00000560207 K7ERQ8 282 aa12.22□□□□□ -0.45
RABGGTA-215ENST00000560207 KRIT1O00522 736 aa12.22□□□□□ -0.45
RABGGTA-215ENST00000560207 SOCS5O75159 536 aa12.22□□□□□ -0.45
RABGGTA-215ENST00000560207 PEX11BO96011 259 aa12.22□□□□□ -0.45
RABGGTA-215ENST00000560207 ITGB7P26010 798 aa12.22□□□□□ -0.45
RABGGTA-215ENST00000560207 CD6P30203 668 aa12.22□□□□□ -0.45
RABGGTA-215ENST00000560207 STIP1P31948 543 aaKnown RBP12.22□□□□□ -0.45
RABGGTA-215ENST00000560207 NBL1P41271 181 aa12.22□□□□□ -0.45
RABGGTA-215ENST00000560207 TPMTP51580 245 aa12.22□□□□□ -0.45
RABGGTA-215ENST00000560207 BCL2L1Q07817 233 aa12.22□□□□□ -0.45
RABGGTA-215ENST00000560207 SLC10A7Q0GE19 358 aa12.22□□□□□ -0.45
RABGGTA-215ENST00000560207 TCF15Q12870 199 aa12.22□□□□□ -0.45
RABGGTA-215ENST00000560207 SLC10A2Q12908 348 aaPredicted RBP12.22□□□□□ -0.45
RABGGTA-215ENST00000560207 KLF1Q13351 362 aaPredicted RBP12.22□□□□□ -0.45
RABGGTA-215ENST00000560207 PRKD1Q15139 912 aaPredicted RBP12.22□□□□□ -0.45
RABGGTA-215ENST00000560207 SLC45A4Q5BKX6 768 aa12.22□□□□□ -0.45
RABGGTA-215ENST00000560207 ZNF805Q5CZA5 627 aa12.22□□□□□ -0.45
RABGGTA-215ENST00000560207 CFAP58Q5T655 872 aa12.22□□□□□ -0.45
RABGGTA-215ENST00000560207 BRAT1Q6PJG6 821 aa12.22□□□□□ -0.45
RABGGTA-215ENST00000560207 TSSK4Q6SA08 328 aa12.22□□□□□ -0.45
RABGGTA-215ENST00000560207 GDPD4Q6W3E5 623 aa12.22□□□□□ -0.45
RABGGTA-215ENST00000560207 CEP68Q76N32 757 aa12.22□□□□□ -0.45
RABGGTA-215ENST00000560207 RABEPKQ7Z6M1 372 aa12.22□□□□□ -0.45
RABGGTA-215ENST00000560207 SLC13A5Q86YT5 568 aaPredicted RBP12.22□□□□□ -0.45
RABGGTA-215ENST00000560207 MMAAQ8IVH4 418 aaKnown RBP12.22□□□□□ -0.45
RABGGTA-215ENST00000560207 ZNF366Q8N895 744 aa12.22□□□□□ -0.45
RABGGTA-215ENST00000560207 PRSS33Q8NF86 280 aa12.22□□□□□ -0.45
RABGGTA-215ENST00000560207 FAM131CQ96AQ9 280 aa12.22□□□□□ -0.45
RABGGTA-215ENST00000560207 HEMGNQ9BXL5 484 aa12.22□□□□□ -0.45
RABGGTA-215ENST00000560207 RBM22Q9NW64 420 aaKnown RBP eCLIP12.22□□□□□ -0.45
RABGGTA-215ENST00000560207 C2orf42Q9NWW7 574 aa12.22□□□□□ -0.45
RABGGTA-215ENST00000560207 FBXL12Q9NXK8 326 aa12.22□□□□□ -0.45
RABGGTA-215ENST00000560207 LHX3Q9UBR4 397 aa12.22□□□□□ -0.45
RABGGTA-215ENST00000560207 RNF14Q9UBS8 474 aa12.22□□□□□ -0.45
RABGGTA-215ENST00000560207 PACSIN2Q9UNF0 486 aaPredicted RBP12.22□□□□□ -0.45
RABGGTA-215ENST00000560207 RALGAPA1Q6GYQ0 2036 aa12.21□□□□□ -0.45
RABGGTA-215ENST00000560207 BCLAF3A2AJT9 711 aaKnown RBP12.21□□□□□ -0.45
RABGGTA-215ENST00000560207 PROB1E7EW31 1015 aa12.21□□□□□ -0.45
RABGGTA-215ENST00000560207 H0Y858 1186 aa12.21□□□□□ -0.45
RABGGTA-215ENST00000560207 KIF2AO00139 706 aaPredicted RBP12.21□□□□□ -0.45
RABGGTA-215ENST00000560207 KPNA3O00505 521 aaPredicted RBP12.21□□□□□ -0.45
RABGGTA-215ENST00000560207 INSIG1O15503 277 aa12.21□□□□□ -0.45
RABGGTA-215ENST00000560207 AP1G1O43747 822 aa12.21□□□□□ -0.45
RABGGTA-215ENST00000560207 BNIP3LO60238 219 aa12.21□□□□□ -0.45
RABGGTA-215ENST00000560207 FOXD2O60548 495 aaPredicted RBP12.21□□□□□ -0.45
RABGGTA-215ENST00000560207 SERPINF2P08697 491 aa12.21□□□□□ -0.45
RABGGTA-215ENST00000560207 RBP3P10745 1247 aa12.21□□□□□ -0.45
RABGGTA-215ENST00000560207 HOXD12P35452 270 aa12.21□□□□□ -0.45
RABGGTA-215ENST00000560207 TNNT3P45378 269 aaPredicted RBP12.21□□□□□ -0.45
RABGGTA-215ENST00000560207 NEK3P51956 506 aa12.21□□□□□ -0.45
RABGGTA-215ENST00000560207 RPL26P61254 145 aaKnown RBP12.21□□□□□ -0.45
RABGGTA-215ENST00000560207 GNG11P61952 73 aa12.21□□□□□ -0.45
RABGGTA-215ENST00000560207 OTUD4Q01804 1114 aaKnown RBP12.21□□□□□ -0.45
RABGGTA-215ENST00000560207 LMNB2Q03252 620 aa12.21□□□□□ -0.45
RABGGTA-215ENST00000560207 MAP7D1Q3KQU3 841 aa12.21□□□□□ -0.45
RABGGTA-215ENST00000560207 TEX44Q53QW1 395 aa12.21□□□□□ -0.45
RABGGTA-215ENST00000560207 SYCP2LQ5T4T6 812 aa12.21□□□□□ -0.45
RABGGTA-215ENST00000560207 ITPRIPL1Q6GPH6 555 aa12.21□□□□□ -0.45
RABGGTA-215ENST00000560207 FBXL19Q6PCT2 694 aa12.21□□□□□ -0.45
RABGGTA-215ENST00000560207 DRICH1Q6PGQ1 229 aaPredicted RBP12.21□□□□□ -0.45
RABGGTA-215ENST00000560207 C4orf22Q6V702 233 aa12.21□□□□□ -0.45
RABGGTA-215ENST00000560207 LPCAT2Q7L5N7 544 aa12.21□□□□□ -0.45
RABGGTA-215ENST00000560207 TSEN2Q8NCE0 465 aaKnown RBP12.21□□□□□ -0.45
RABGGTA-215ENST00000560207 ACTL9Q8TC94 416 aa12.21□□□□□ -0.45
RABGGTA-215ENST00000560207 GANCQ8TET4 914 aa12.21□□□□□ -0.45
RABGGTA-215ENST00000560207 HTR3CQ8WXA8 447 aa12.21□□□□□ -0.45
RABGGTA-215ENST00000560207 QKIQ96PU8 341 aaKnown RBP eCLIP12.21□□□□□ -0.45
RABGGTA-215ENST00000560207 SRPK1Q96SB4 655 aaKnown RBP12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms