RNA–Protein interactions for RNA: ENST00000560196.5

ZEB1-218, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 1,014 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-218ENST00000560196 PKN3Q6P5Z2 889 aa14.66□□□□□ -0.06
ZEB1-218ENST00000560196 TRMT10BQ6PF06 316 aaKnown RBP14.66□□□□□ -0.06
ZEB1-218ENST00000560196 RBM23Q86U06 439 aaKnown RBP14.66□□□□□ -0.06
ZEB1-218ENST00000560196 MFN1Q8IWA4 741 aa14.66□□□□□ -0.06
ZEB1-218ENST00000560196 PPM1NQ8N819 430 aa14.66□□□□□ -0.06
ZEB1-218ENST00000560196 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.66□□□□□ -0.06
ZEB1-218ENST00000560196 GDPD5Q8WTR4 605 aa14.66□□□□□ -0.06
ZEB1-218ENST00000560196 DDI1Q8WTU0 396 aa14.66□□□□□ -0.06
ZEB1-218ENST00000560196 PPP2R3CQ969Q6 453 aa14.66□□□□□ -0.06
ZEB1-218ENST00000560196 LMLNQ96KR4 655 aa14.66□□□□□ -0.06
ZEB1-218ENST00000560196 SEMA3CQ99985 751 aa14.66□□□□□ -0.06
ZEB1-218ENST00000560196 APOL2Q9BQE5 337 aa14.66□□□□□ -0.06
ZEB1-218ENST00000560196 C2orf49Q9BVC5 232 aaPredicted RBP14.66□□□□□ -0.06
ZEB1-218ENST00000560196 SLC28A3Q9HAS3 691 aa14.66□□□□□ -0.06
ZEB1-218ENST00000560196 SMYD2Q9NRG4 433 aa14.66□□□□□ -0.06
ZEB1-218ENST00000560196 PIH1D1Q9NWS0 290 aaKnown RBP14.66□□□□□ -0.06
ZEB1-218ENST00000560196 KIAA1522Q9P206 1035 aaPredicted RBP14.66□□□□□ -0.06
ZEB1-218ENST00000560196 PRKAG3Q9UGI9 489 aa14.66□□□□□ -0.06
ZEB1-218ENST00000560196 CCL26Q9Y258 94 aa14.66□□□□□ -0.06
ZEB1-218ENST00000560196 MRPS23Q9Y3D9 190 aaKnown RBP14.66□□□□□ -0.06
ZEB1-218ENST00000560196 RPS6KL1Q9Y6S9 549 aa14.66□□□□□ -0.06
ZEB1-218ENST00000560196 CXorf49A8MYA2 514 aaPredicted RBP14.65□□□□□ -0.06
ZEB1-218ENST00000560196 CBX4O00257 560 aa14.65□□□□□ -0.06
ZEB1-218ENST00000560196 SLC9A3R1O14745 358 aaPredicted RBP14.65□□□□□ -0.06
ZEB1-218ENST00000560196 PRPF4O43172 522 aaKnown RBP eCLIP14.65□□□□□ -0.06
ZEB1-218ENST00000560196 ATP9BO43861 1147 aa14.65□□□□□ -0.06
ZEB1-218ENST00000560196 PRAMEF12O95522 483 aa14.65□□□□□ -0.06
ZEB1-218ENST00000560196 CD160O95971 181 aa14.65□□□□□ -0.06
ZEB1-218ENST00000560196 SERPINF2P08697 491 aa14.65□□□□□ -0.06
ZEB1-218ENST00000560196 CEBPBP17676 345 aa14.65□□□□□ -0.06
ZEB1-218ENST00000560196 KRT15P19012 456 aa14.65□□□□□ -0.06
ZEB1-218ENST00000560196 HLA-DPA1P20036 260 aa14.65□□□□□ -0.06
ZEB1-218ENST00000560196 GLDCP23378 1020 aa14.65□□□□□ -0.06
ZEB1-218ENST00000560196 ADRA1DP25100 572 aa14.65□□□□□ -0.06
ZEB1-218ENST00000560196 CSKP41240 450 aa14.65□□□□□ -0.06
ZEB1-218ENST00000560196 NSUN2Q08J23 767 aaKnown RBP eCLIP14.65□□□□□ -0.06
ZEB1-218ENST00000560196 MSLNQ13421 630 aaPredicted RBP14.65□□□□□ -0.06
ZEB1-218ENST00000560196 IHHQ14623 411 aa14.65□□□□□ -0.06
ZEB1-218ENST00000560196 SLC1A5Q15758 541 aa14.65□□□□□ -0.06
ZEB1-218ENST00000560196 ZNF697Q5TEC3 545 aa14.65□□□□□ -0.06
ZEB1-218ENST00000560196 TMEM184AQ6ZMB5 413 aa14.65□□□□□ -0.06
ZEB1-218ENST00000560196 METTL3Q86U44 580 aaKnown RBP14.65□□□□□ -0.06
ZEB1-218ENST00000560196 CTAGE3PQ8IX95 158 aa14.65□□□□□ -0.06
ZEB1-218ENST00000560196 SRRM1Q8IYB3 904 aaKnown RBP14.65□□□□□ -0.06
ZEB1-218ENST00000560196 PPHLN1Q8NEY8 458 aaKnown RBP14.65□□□□□ -0.06
ZEB1-218ENST00000560196 WFDC5Q8TCV5 224 aa14.65□□□□□ -0.06
ZEB1-218ENST00000560196 ACDQ96AP0 544 aa14.65□□□□□ -0.06
ZEB1-218ENST00000560196 ZNF669Q96BR6 464 aaPredicted RBP14.65□□□□□ -0.06
ZEB1-218ENST00000560196 ALKBH8Q96BT7 664 aaKnown RBP14.65□□□□□ -0.06
ZEB1-218ENST00000560196 MRPL38Q96DV4 380 aaKnown RBP14.65□□□□□ -0.06
ZEB1-218ENST00000560196 MTBPQ96DY7 904 aa14.65□□□□□ -0.06
ZEB1-218ENST00000560196 CERS2Q96G23 380 aa14.65□□□□□ -0.06
ZEB1-218ENST00000560196 FCRL3Q96P31 734 aaPredicted RBP14.65□□□□□ -0.06
ZEB1-218ENST00000560196 NUDCD1Q96RS6 583 aa14.65□□□□□ -0.06
ZEB1-218ENST00000560196 TRIM56Q9BRZ2 755 aaKnown RBP14.65□□□□□ -0.06
ZEB1-218ENST00000560196 SMG9Q9H0W8 520 aaKnown RBP14.65□□□□□ -0.06
ZEB1-218ENST00000560196 TRABDQ9H4I3 376 aa14.65□□□□□ -0.06
ZEB1-218ENST00000560196 CERS4Q9HA82 394 aa14.65□□□□□ -0.06
ZEB1-218ENST00000560196 PIDD1Q9HB75 910 aa14.65□□□□□ -0.06
ZEB1-218ENST00000560196 MARK1Q9P0L2 795 aa14.65□□□□□ -0.06
ZEB1-218ENST00000560196 VPS28Q9UK41 221 aa14.65□□□□□ -0.06
ZEB1-218ENST00000560196 TCAF1Q9Y4C2 921 aa14.65□□□□□ -0.06
ZEB1-218ENST00000560196 ARIH1Q9Y4X5 557 aaPredicted RBP14.65□□□□□ -0.06
ZEB1-218ENST00000560196 EPOPA6NHQ4 379 aa14.64□□□□□ -0.07
ZEB1-218ENST00000560196 SCAMP3O14828 347 aaKnown RBP14.64□□□□□ -0.07
ZEB1-218ENST00000560196 SNAP91O60641 907 aa14.64□□□□□ -0.07
ZEB1-218ENST00000560196 KRT37O76014 449 aa14.64□□□□□ -0.07
ZEB1-218ENST00000560196 TMCC1O94876 653 aa14.64□□□□□ -0.07
ZEB1-218ENST00000560196 PAPSS2O95340 614 aaPredicted RBP14.64□□□□□ -0.07
ZEB1-218ENST00000560196 FGF1P05230 155 aa14.64□□□□□ -0.07
ZEB1-218ENST00000560196 SNRPAP09012 282 aaKnown RBP14.64□□□□□ -0.07
ZEB1-218ENST00000560196 BRAFP15056 766 aa14.64□□□□□ -0.07
ZEB1-218ENST00000560196 TPH1P17752 444 aa14.64□□□□□ -0.07
ZEB1-218ENST00000560196 SERPINH1P50454 418 aaKnown RBP14.64□□□□□ -0.07
ZEB1-218ENST00000560196 SLC20A2Q08357 652 aa14.64□□□□□ -0.07
ZEB1-218ENST00000560196 DNAJC3Q13217 504 aa14.64□□□□□ -0.07
ZEB1-218ENST00000560196 LAMB3Q13751 1172 aa14.64□□□□□ -0.07
ZEB1-218ENST00000560196 RETSATQ6NUM9 610 aa14.64□□□□□ -0.07
ZEB1-218ENST00000560196 LEKR1Q6ZMV7 388 aa14.64□□□□□ -0.07
ZEB1-218ENST00000560196 ARID3BQ8IVW6 561 aaPredicted RBP14.64□□□□□ -0.07
ZEB1-218ENST00000560196 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.64□□□□□ -0.07
ZEB1-218ENST00000560196 CELF5Q8N6W0 485 aaKnown RBP14.64□□□□□ -0.07
ZEB1-218ENST00000560196 VN1R2Q8NFZ6 395 aa14.64□□□□□ -0.07
ZEB1-218ENST00000560196 RIN3Q8TB24 985 aa14.64□□□□□ -0.07
ZEB1-218ENST00000560196 ZSWIM3Q96MP5 696 aa14.64□□□□□ -0.07
ZEB1-218ENST00000560196 SELENOSQ9BQE4 189 aa14.64□□□□□ -0.07
ZEB1-218ENST00000560196 CHRAC1Q9NRG0 131 aa14.64□□□□□ -0.07
ZEB1-218ENST00000560196 VPS51Q9UID3 782 aa14.64□□□□□ -0.07
ZEB1-218ENST00000560196 SMG5Q9UPR3 1016 aaKnown RBP14.64□□□□□ -0.07
ZEB1-218ENST00000560196 ATG2AQ2TAZ0 1938 aa14.64□□□□□ -0.07
ZEB1-218ENST00000560196 HEATR9A2RTY3 570 aa14.63□□□□□ -0.07
ZEB1-218ENST00000560196 INSIG1O15503 277 aa14.63□□□□□ -0.07
ZEB1-218ENST00000560196 KRT38O76015 456 aa14.63□□□□□ -0.07
ZEB1-218ENST00000560196 NDST3O95803 873 aa14.63□□□□□ -0.07
ZEB1-218ENST00000560196 ATXN1LP0C7T5 689 aaKnown RBP14.63□□□□□ -0.07
ZEB1-218ENST00000560196 ALADP13716 330 aa14.63□□□□□ -0.07
ZEB1-218ENST00000560196 CSNK1DP48730 415 aa14.63□□□□□ -0.07
ZEB1-218ENST00000560196 GNGT1P63211 74 aa14.63□□□□□ -0.07
ZEB1-218ENST00000560196 CDK18Q07002 472 aa14.63□□□□□ -0.07
ZEB1-218ENST00000560196 LMAN2Q12907 356 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms