RNA–Protein interactions for RNA: ENST00000559898.5

HDDC3-205, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,024 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-205ENST00000559898 KDELR3O43731 214 aa18.03■□□□□ 0.48
HDDC3-205ENST00000559898 UGT2B4P06133 528 aa18.03■□□□□ 0.48
HDDC3-205ENST00000559898 THEGLP0DJG4 465 aa18.03■□□□□ 0.48
HDDC3-205ENST00000559898 MYF5P13349 255 aa18.03■□□□□ 0.48
HDDC3-205ENST00000559898 RECQLP46063 649 aaPredicted RBP18.03■□□□□ 0.48
HDDC3-205ENST00000559898 RXRGP48443 463 aa18.03■□□□□ 0.48
HDDC3-205ENST00000559898 ZNF165P49910 485 aa18.03■□□□□ 0.48
HDDC3-205ENST00000559898 NEK3P51956 506 aa18.03■□□□□ 0.48
HDDC3-205ENST00000559898 SLC20A2Q08357 652 aa18.03■□□□□ 0.48
HDDC3-205ENST00000559898 MAPK8IP2Q13387 824 aaPredicted RBP18.03■□□□□ 0.48
HDDC3-205ENST00000559898 ASIC2Q16515 512 aa18.03■□□□□ 0.48
HDDC3-205ENST00000559898 TMC6Q7Z403 805 aa18.03■□□□□ 0.48
HDDC3-205ENST00000559898 TP53INP2Q8IXH6 220 aa18.03■□□□□ 0.48
HDDC3-205ENST00000559898 SLC25A45Q8N413 288 aa18.03■□□□□ 0.48
HDDC3-205ENST00000559898 RTL3Q8N8U3 475 aaKnown RBP18.03■□□□□ 0.48
HDDC3-205ENST00000559898 KLHDC7BQ96G42 594 aa18.03■□□□□ 0.48
HDDC3-205ENST00000559898 CELF6Q96J87 481 aaKnown RBP18.03■□□□□ 0.48
HDDC3-205ENST00000559898 EXOC2Q96KP1 924 aa18.03■□□□□ 0.48
HDDC3-205ENST00000559898 CNPY3Q9BT09 278 aa18.03■□□□□ 0.48
HDDC3-205ENST00000559898 PCSK1NQ9UHG2 260 aa18.03■□□□□ 0.48
HDDC3-205ENST00000559898 GOLGA4Q13439 2230 aaKnown RBP18.02■□□□□ 0.48
HDDC3-205ENST00000559898 SYCE3A1L190 88 aa18.02■□□□□ 0.48
HDDC3-205ENST00000559898 C16orf96A6NNT2 1141 aa18.02■□□□□ 0.48
HDDC3-205ENST00000559898 RASA4BC9J798 803 aa18.02■□□□□ 0.48
HDDC3-205ENST00000559898 KRIT1O00522 736 aa18.02■□□□□ 0.48
HDDC3-205ENST00000559898 TRIM38O00635 465 aa18.02■□□□□ 0.48
HDDC3-205ENST00000559898 RASA4O43374 803 aa18.02■□□□□ 0.48
HDDC3-205ENST00000559898 BUB1O43683 1085 aa18.02■□□□□ 0.48
HDDC3-205ENST00000559898 DFNA5O60443 496 aa18.02■□□□□ 0.48
HDDC3-205ENST00000559898 TMCC1O94876 653 aa18.02■□□□□ 0.48
HDDC3-205ENST00000559898 LDOC1O95751 146 aaPredicted RBP18.02■□□□□ 0.48
HDDC3-205ENST00000559898 PAK4O96013 591 aaPredicted RBP18.02■□□□□ 0.48
HDDC3-205ENST00000559898 GIMD1P0DJR0 217 aa18.02■□□□□ 0.48
HDDC3-205ENST00000559898 TCF4P15884 667 aa18.02■□□□□ 0.48
HDDC3-205ENST00000559898 CAMK2BQ13554 666 aa18.02■□□□□ 0.48
HDDC3-205ENST00000559898 NR1I3Q14994 352 aa18.02■□□□□ 0.48
HDDC3-205ENST00000559898 CYTH1Q15438 398 aa18.02■□□□□ 0.48
HDDC3-205ENST00000559898 SLC45A4Q5BKX6 768 aa18.02■□□□□ 0.48
HDDC3-205ENST00000559898 EFHC2Q5JST6 749 aa18.02■□□□□ 0.48
HDDC3-205ENST00000559898 PLEKHA7Q6IQ23 1121 aa18.02■□□□□ 0.48
HDDC3-205ENST00000559898 DCUN1D2Q6PH85 259 aa18.02■□□□□ 0.48
HDDC3-205ENST00000559898 LUZP1Q86V48 1076 aa18.02■□□□□ 0.48
HDDC3-205ENST00000559898 ZNF354CQ86Y25 554 aa18.02■□□□□ 0.48
HDDC3-205ENST00000559898 SKA1Q96BD8 255 aa18.02■□□□□ 0.48
HDDC3-205ENST00000559898 KLHL32Q96NJ5 620 aa18.02■□□□□ 0.48
HDDC3-205ENST00000559898 KCTD15Q96SI1 283 aaPredicted RBP18.02■□□□□ 0.48
HDDC3-205ENST00000559898 CALN1Q9BXU9 219 aa18.02■□□□□ 0.48
HDDC3-205ENST00000559898 ERVMER34-1Q9H9K5 563 aa18.02■□□□□ 0.48
HDDC3-205ENST00000559898 CBX8Q9HC52 389 aa18.02■□□□□ 0.48
HDDC3-205ENST00000559898 TMEM51Q9NW97 253 aa18.02■□□□□ 0.48
HDDC3-205ENST00000559898 LHX3Q9UBR4 397 aa18.02■□□□□ 0.48
HDDC3-205ENST00000559898 MFHAS1Q9Y4C4 1052 aa18.02■□□□□ 0.48
HDDC3-205ENST00000559898 LAMA5O15230 3695 aa18.02■□□□□ 0.47
HDDC3-205ENST00000559898 ANKRD36A6QL64 1941 aa18.02■□□□□ 0.47
HDDC3-205ENST00000559898 IGLON5A6NGN9 336 aa18.01■□□□□ 0.47
HDDC3-205ENST00000559898 J3KR12 359 aa18.01■□□□□ 0.47
HDDC3-205ENST00000559898 HNRNPA2B1P22626 353 aaKnown RBP18.01■□□□□ 0.47
HDDC3-205ENST00000559898 ACADVLP49748 655 aa18.01■□□□□ 0.47
HDDC3-205ENST00000559898 SERINC3Q13530 473 aa18.01■□□□□ 0.47
HDDC3-205ENST00000559898 MYLK3Q32MK0 819 aa18.01■□□□□ 0.47
HDDC3-205ENST00000559898 FBXL19Q6PCT2 694 aa18.01■□□□□ 0.47
HDDC3-205ENST00000559898 ARHGAP36Q6ZRI8 547 aa18.01■□□□□ 0.47
HDDC3-205ENST00000559898 NYAP1Q6ZVC0 841 aa18.01■□□□□ 0.47
HDDC3-205ENST00000559898 IQCHQ86VS3 1027 aa18.01■□□□□ 0.47
HDDC3-205ENST00000559898 OR2AP1Q8NGE2 309 aa18.01■□□□□ 0.47
HDDC3-205ENST00000559898 TSC1Q92574 1164 aa18.01■□□□□ 0.47
HDDC3-205ENST00000559898 ISG20Q96AZ6 181 aaKnown RBP18.01■□□□□ 0.47
HDDC3-205ENST00000559898 KLF6Q99612 283 aaPredicted RBP18.01■□□□□ 0.47
HDDC3-205ENST00000559898 SNRNP25Q9BV90 132 aaKnown RBP18.01■□□□□ 0.47
HDDC3-205ENST00000559898 SLC17A9Q9BYT1 436 aa18.01■□□□□ 0.47
HDDC3-205ENST00000559898 PNMA8BQ9ULN7 279 aaPredicted RBP18.01■□□□□ 0.47
HDDC3-205ENST00000559898 CELSR3Q9NYQ7 3312 aa18■□□□□ 0.47
HDDC3-205ENST00000559898 TMEM8BA6NDV4 472 aa18■□□□□ 0.47
HDDC3-205ENST00000559898 TMEM191CA6NGB0 347 aa18■□□□□ 0.47
HDDC3-205ENST00000559898 SMTNL1A8MU46 457 aa18■□□□□ 0.47
HDDC3-205ENST00000559898 WASH4PA8MWX3 477 aa18■□□□□ 0.47
HDDC3-205ENST00000559898 PIGNO95427 931 aa18■□□□□ 0.47
HDDC3-205ENST00000559898 GSRP00390 522 aa18■□□□□ 0.47
HDDC3-205ENST00000559898 FTLP02792 175 aaPredicted RBP18■□□□□ 0.47
HDDC3-205ENST00000559898 PSMA2P25787 234 aa18■□□□□ 0.47
HDDC3-205ENST00000559898 RGRP47804 291 aa18■□□□□ 0.47
HDDC3-205ENST00000559898 ARRB1P49407 418 aaPredicted RBP18■□□□□ 0.47
HDDC3-205ENST00000559898 SEMG2Q02383 582 aa18■□□□□ 0.47
HDDC3-205ENST00000559898 SMAD1Q15797 465 aaKnown RBP18■□□□□ 0.47
HDDC3-205ENST00000559898 NEK5Q6P3R8 708 aa18■□□□□ 0.47
HDDC3-205ENST00000559898 Q6ZSR6 202 aa18■□□□□ 0.47
HDDC3-205ENST00000559898 ABI3BPQ7Z7G0 1075 aa18■□□□□ 0.47
HDDC3-205ENST00000559898 PPP1R16AQ96I34 528 aa18■□□□□ 0.47
HDDC3-205ENST00000559898 NSMCE3Q96MG7 304 aa18■□□□□ 0.47
HDDC3-205ENST00000559898 SLC39A8Q9C0K1 460 aa18■□□□□ 0.47
HDDC3-205ENST00000559898 NAT10Q9H0A0 1025 aaKnown RBP18■□□□□ 0.47
HDDC3-205ENST00000559898 LRRC19Q9H756 370 aa18■□□□□ 0.47
HDDC3-205ENST00000559898 AIPL1Q9NZN9 384 aa18■□□□□ 0.47
HDDC3-205ENST00000559898 MYO1AQ9UBC5 1043 aa18■□□□□ 0.47
HDDC3-205ENST00000559898 KLF15Q9UIH9 416 aa18■□□□□ 0.47
HDDC3-205ENST00000559898 TPX2Q9ULW0 747 aaKnown RBP18■□□□□ 0.47
HDDC3-205ENST00000559898 MYO6Q9UM54 1294 aa18■□□□□ 0.47
HDDC3-205ENST00000559898 AP4E1Q9UPM8 1137 aa18■□□□□ 0.47
HDDC3-205ENST00000559898 CHD6Q8TD26 2715 aa18■□□□□ 0.47
HDDC3-205ENST00000559898 FFAR2O15552 330 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms