RNA–Protein interactions for RNA: ENST00000559694.5

CARMIL3-202, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 5

Gene CARMIL3, Length 4,319 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-202ENST00000559694 A0A1B0GVM2 712 aa10.79□□□□□ -0.68
CARMIL3-202ENST00000559694 MAGEB16A2A368 324 aa10.79□□□□□ -0.68
CARMIL3-202ENST00000559694 TCAF2A6NFQ2 919 aa10.79□□□□□ -0.68
CARMIL3-202ENST00000559694 VPS26AO75436 327 aa10.79□□□□□ -0.68
CARMIL3-202ENST00000559694 HSPA8P11142 646 aaKnown RBP10.79□□□□□ -0.68
CARMIL3-202ENST00000559694 NPY2RP49146 381 aa10.79□□□□□ -0.68
CARMIL3-202ENST00000559694 RIPK1Q13546 671 aa10.79□□□□□ -0.68
CARMIL3-202ENST00000559694 TMEM259Q4ZIN3 620 aa10.79□□□□□ -0.68
CARMIL3-202ENST00000559694 GALNT4Q8N4A0 578 aa10.79□□□□□ -0.68
CARMIL3-202ENST00000559694 CKAP2Q8WWK9 683 aa10.79□□□□□ -0.68
CARMIL3-202ENST00000559694 GPR88Q9GZN0 384 aa10.79□□□□□ -0.68
CARMIL3-202ENST00000559694 NKX2-4Q9H2Z4 354 aa10.79□□□□□ -0.68
CARMIL3-202ENST00000559694 ADA2Q9NZK5 511 aa10.79□□□□□ -0.68
CARMIL3-202ENST00000559694 ZFP37Q9Y6Q3 630 aaPredicted RBP10.79□□□□□ -0.68
CARMIL3-202ENST00000559694 IRAK2O43187 625 aa10.79□□□□□ -0.68
CARMIL3-202ENST00000559694 STAU1O95793 577 aaKnown RBP10.79□□□□□ -0.68
CARMIL3-202ENST00000559694 MYL2P10916 166 aa10.79□□□□□ -0.68
CARMIL3-202ENST00000559694 ABL2P42684 1182 aa10.79□□□□□ -0.68
CARMIL3-202ENST00000559694 SERPINH1P50454 418 aaKnown RBP10.79□□□□□ -0.68
CARMIL3-202ENST00000559694 YBEYP58557 167 aaPredicted RBP10.79□□□□□ -0.68
CARMIL3-202ENST00000559694 MGAT5Q09328 741 aa10.79□□□□□ -0.68
CARMIL3-202ENST00000559694 SLC44A4Q53GD3 710 aa10.79□□□□□ -0.68
CARMIL3-202ENST00000559694 SPDYCQ5MJ68 293 aa10.79□□□□□ -0.68
CARMIL3-202ENST00000559694 LRRC74BQ6ZQY2 392 aa10.79□□□□□ -0.68
CARMIL3-202ENST00000559694 SCUBE1Q8IWY4 988 aa10.79□□□□□ -0.68
CARMIL3-202ENST00000559694 PLD5Q8N7P1 536 aa10.79□□□□□ -0.68
CARMIL3-202ENST00000559694 OR10T2Q8NGX3 314 aa10.79□□□□□ -0.68
CARMIL3-202ENST00000559694 CASP10Q92851 521 aa10.79□□□□□ -0.68
CARMIL3-202ENST00000559694 C8orf48Q96LL4 319 aa10.79□□□□□ -0.68
CARMIL3-202ENST00000559694 TBC1D10AQ9BXI6 508 aa10.79□□□□□ -0.68
CARMIL3-202ENST00000559694 ARHGEF4Q9NR80 690 aa10.79□□□□□ -0.68
CARMIL3-202ENST00000559694 FBXW11Q9UKB1 542 aa10.79□□□□□ -0.68
CARMIL3-202ENST00000559694 SUPT3HB4E1H0 165 aa10.78□□□□□ -0.68
CARMIL3-202ENST00000559694 MGRN1O60291 552 aa10.78□□□□□ -0.68
CARMIL3-202ENST00000559694 KCNQ1P51787 676 aa10.78□□□□□ -0.68
CARMIL3-202ENST00000559694 KIF19Q2TAC6 998 aa10.78□□□□□ -0.68
CARMIL3-202ENST00000559694 TTC39BQ5VTQ0 682 aaPredicted RBP10.78□□□□□ -0.68
CARMIL3-202ENST00000559694 USP45Q70EL2 814 aa10.78□□□□□ -0.68
CARMIL3-202ENST00000559694 COLGALT2Q8IYK4 626 aa10.78□□□□□ -0.68
CARMIL3-202ENST00000559694 VRTNQ9H8Y1 702 aa10.78□□□□□ -0.68
CARMIL3-202ENST00000559694 NDRG2Q9UN36 371 aaKnown RBP10.78□□□□□ -0.68
CARMIL3-202ENST00000559694 KNL1Q8NG31 2342 aa10.78□□□□□ -0.68
CARMIL3-202ENST00000559694 RNF103-CHMP3A0A140T963 221 aa10.78□□□□□ -0.68
CARMIL3-202ENST00000559694 A8MUI8 341 aa10.78□□□□□ -0.68
CARMIL3-202ENST00000559694 C1QTNF3-AMACRE9PGA6 284 aa10.78□□□□□ -0.68
CARMIL3-202ENST00000559694 INPPL1O15357 1258 aa10.78□□□□□ -0.68
CARMIL3-202ENST00000559694 GJB5O95377 273 aa10.78□□□□□ -0.68
CARMIL3-202ENST00000559694 APODP05090 189 aa10.78□□□□□ -0.68
CARMIL3-202ENST00000559694 CTGFP29279 349 aa10.78□□□□□ -0.68
CARMIL3-202ENST00000559694 HADHAP40939 763 aa10.78□□□□□ -0.68
CARMIL3-202ENST00000559694 ATXN3P54252 364 aaPredicted RBP10.78□□□□□ -0.68
CARMIL3-202ENST00000559694 FAM83EQ2M2I3 478 aa10.78□□□□□ -0.68
CARMIL3-202ENST00000559694 LCA5Q86VQ0 697 aa10.78□□□□□ -0.68
CARMIL3-202ENST00000559694 DDIASQ8IXT1 998 aa10.78□□□□□ -0.68
CARMIL3-202ENST00000559694 SDCCAG3Q96C92 435 aa10.78□□□□□ -0.68
CARMIL3-202ENST00000559694 PPP1R16AQ96I34 528 aa10.78□□□□□ -0.68
CARMIL3-202ENST00000559694 RPL10LQ96L21 214 aaKnown RBP10.78□□□□□ -0.68
CARMIL3-202ENST00000559694 GRID1Q9ULK0 1009 aa10.78□□□□□ -0.68
CARMIL3-202ENST00000559694 PDZK1P1A8MUH7 402 aa10.78□□□□□ -0.68
CARMIL3-202ENST00000559694 LCA5LO95447 670 aa10.78□□□□□ -0.68
CARMIL3-202ENST00000559694 NUDT17P0C025 328 aa10.78□□□□□ -0.68
CARMIL3-202ENST00000559694 CYP2A6P11509 494 aaPredicted RBP10.78□□□□□ -0.68
CARMIL3-202ENST00000559694 MAPK8P45983 427 aa10.78□□□□□ -0.68
CARMIL3-202ENST00000559694 ARL4DP49703 201 aa10.78□□□□□ -0.68
CARMIL3-202ENST00000559694 GNA12Q03113 381 aa10.78□□□□□ -0.68
CARMIL3-202ENST00000559694 RBBP7Q16576 425 aa10.78□□□□□ -0.68
CARMIL3-202ENST00000559694 CPNE8Q86YQ8 564 aa10.78□□□□□ -0.68
CARMIL3-202ENST00000559694 TOP1MTQ969P6 601 aa10.78□□□□□ -0.68
CARMIL3-202ENST00000559694 E2F7Q96AV8 911 aa10.78□□□□□ -0.68
CARMIL3-202ENST00000559694 NRBF2Q96F24 287 aa10.78□□□□□ -0.68
CARMIL3-202ENST00000559694 SLC7A5P2Q9GIP4 190 aa10.78□□□□□ -0.68
CARMIL3-202ENST00000559694 LZTS1Q9Y250 596 aa10.78□□□□□ -0.68
CARMIL3-202ENST00000559694 POLR2AP24928 1970 aaKnown RBP10.78□□□□□ -0.68
CARMIL3-202ENST00000559694 TIMM44O43615 452 aa10.77□□□□□ -0.68
CARMIL3-202ENST00000559694 MFSD11O43934 449 aa10.77□□□□□ -0.68
CARMIL3-202ENST00000559694 CTPS1P17812 591 aa10.77□□□□□ -0.68
CARMIL3-202ENST00000559694 LBRQ14739 615 aaKnown RBP10.77□□□□□ -0.68
CARMIL3-202ENST00000559694 CCDC92Q53HC0 331 aaPredicted RBP10.77□□□□□ -0.68
CARMIL3-202ENST00000559694 ZNF470Q6ECI4 717 aa10.77□□□□□ -0.68
CARMIL3-202ENST00000559694 UGT3A1Q6NUS8 523 aa10.77□□□□□ -0.68
CARMIL3-202ENST00000559694 CHST9Q7L1S5 443 aa10.77□□□□□ -0.68
CARMIL3-202ENST00000559694 FAM124AQ86V42 546 aa10.77□□□□□ -0.68
CARMIL3-202ENST00000559694 EXOC3L1Q86VI1 746 aa10.77□□□□□ -0.68
CARMIL3-202ENST00000559694 ANKRD31Q8N7Z5 1873 aa10.77□□□□□ -0.68
CARMIL3-202ENST00000559694 SAMD11Q96NU1 681 aa10.77□□□□□ -0.68
CARMIL3-202ENST00000559694 MYOCQ99972 504 aa10.77□□□□□ -0.68
CARMIL3-202ENST00000559694 BTBD10Q9BSF8 475 aa10.77□□□□□ -0.68
CARMIL3-202ENST00000559694 SPATA16Q9BXB7 569 aa10.77□□□□□ -0.68
CARMIL3-202ENST00000559694 PRKD2Q9BZL6 878 aa10.77□□□□□ -0.68
CARMIL3-202ENST00000559694 PIGVQ9NUD9 493 aa10.77□□□□□ -0.68
CARMIL3-202ENST00000559694 UTP6Q9NYH9 597 aaKnown RBP10.77□□□□□ -0.68
CARMIL3-202ENST00000559694 NDUFA13Q9P0J0 144 aa10.77□□□□□ -0.68
CARMIL3-202ENST00000559694 R3HDM2Q9Y2K5 976 aaKnown RBP10.77□□□□□ -0.68
CARMIL3-202ENST00000559694 ERI2A8K979 691 aaKnown RBP10.77□□□□□ -0.69
CARMIL3-202ENST00000559694 GRXCR1A8MXD5 290 aa10.77□□□□□ -0.69
CARMIL3-202ENST00000559694 F8W810 466 aa10.77□□□□□ -0.69
CARMIL3-202ENST00000559694 GRM6O15303 877 aa10.77□□□□□ -0.69
CARMIL3-202ENST00000559694 EPHX1P07099 455 aa10.77□□□□□ -0.69
CARMIL3-202ENST00000559694 STMN1P16949 149 aa10.77□□□□□ -0.69
CARMIL3-202ENST00000559694 CDKN2BP42772 138 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms