RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 SRGAP2O75044 1071 aa13.33□□□□□ -0.28
TPM1-220ENST00000559556 CSO75390 466 aaKnown RBP13.33□□□□□ -0.28
TPM1-220ENST00000559556 NEBLO76041 1014 aa13.33□□□□□ -0.28
TPM1-220ENST00000559556 ENDOD1O94919 500 aa13.33□□□□□ -0.28
TPM1-220ENST00000559556 CD160O95971 181 aa13.33□□□□□ -0.28
TPM1-220ENST00000559556 PAK4O96013 591 aaPredicted RBP13.33□□□□□ -0.28
TPM1-220ENST00000559556 MPOP05164 745 aa13.33□□□□□ -0.28
TPM1-220ENST00000559556 ETFBP38117 255 aa13.33□□□□□ -0.28
TPM1-220ENST00000559556 RABIFP47224 123 aa13.33□□□□□ -0.28
TPM1-220ENST00000559556 LSSP48449 732 aa13.33□□□□□ -0.28
TPM1-220ENST00000559556 ERVPABLB-1P60509 514 aa13.33□□□□□ -0.28
TPM1-220ENST00000559556 NOMO3P69849 1222 aa13.33□□□□□ -0.28
TPM1-220ENST00000559556 GABREP78334 506 aa13.33□□□□□ -0.28
TPM1-220ENST00000559556 NRG1Q02297 640 aaPredicted RBP13.33□□□□□ -0.28
TPM1-220ENST00000559556 MAPK8IP2Q13387 824 aaPredicted RBP13.33□□□□□ -0.28
TPM1-220ENST00000559556 RAPGEF1Q13905 1077 aa13.33□□□□□ -0.28
TPM1-220ENST00000559556 CAMK4Q16566 473 aa13.33□□□□□ -0.28
TPM1-220ENST00000559556 TPD52L1Q16890 204 aaPredicted RBP13.33□□□□□ -0.28
TPM1-220ENST00000559556 C2CD6Q53TS8 623 aa13.33□□□□□ -0.28
TPM1-220ENST00000559556 ZNF542PQ5EBM4 170 aa13.33□□□□□ -0.28
TPM1-220ENST00000559556 CARD16Q5EG05 197 aa13.33□□□□□ -0.28
TPM1-220ENST00000559556 MANEALQ5VSG8 457 aa13.33□□□□□ -0.28
TPM1-220ENST00000559556 IGF2-ASQ6U949 168 aa13.33□□□□□ -0.28
TPM1-220ENST00000559556 FAM131BQ86XD5 332 aa13.33□□□□□ -0.28
TPM1-220ENST00000559556 LSMEM2Q8N112 164 aa13.33□□□□□ -0.28
TPM1-220ENST00000559556 MSANTD4Q8NCY6 345 aa13.33□□□□□ -0.28
TPM1-220ENST00000559556 DENND6BQ8NEG7 585 aa13.33□□□□□ -0.28
TPM1-220ENST00000559556 IFI44Q8TCB0 444 aa13.33□□□□□ -0.28
TPM1-220ENST00000559556 EPS8L1Q8TE68 723 aa13.33□□□□□ -0.28
TPM1-220ENST00000559556 RAB7BQ96AH8 199 aa13.33□□□□□ -0.28
TPM1-220ENST00000559556 CFAP57Q96MR6 1250 aa13.33□□□□□ -0.28
TPM1-220ENST00000559556 LENG8Q96PV6 779 aaPredicted RBP13.33□□□□□ -0.28
TPM1-220ENST00000559556 TUBGCP2Q9BSJ2 902 aa13.33□□□□□ -0.28
TPM1-220ENST00000559556 SPON2Q9BUD6 331 aa13.33□□□□□ -0.28
TPM1-220ENST00000559556 C1QTNF2Q9BXJ5 285 aa13.33□□□□□ -0.28
TPM1-220ENST00000559556 NAA15Q9BXJ9 866 aaKnown RBP13.33□□□□□ -0.28
TPM1-220ENST00000559556 RETREG1Q9H6L5 497 aa13.33□□□□□ -0.28
TPM1-220ENST00000559556 ZDHHC6Q9H6R6 413 aa13.33□□□□□ -0.28
TPM1-220ENST00000559556 POLR1BQ9H9Y6 1135 aa13.33□□□□□ -0.28
TPM1-220ENST00000559556 ASCL3Q9NQ33 180 aa13.33□□□□□ -0.28
TPM1-220ENST00000559556 NCKIPSDQ9NZQ3 722 aa13.33□□□□□ -0.28
TPM1-220ENST00000559556 FCF1Q9Y324 198 aaKnown RBP13.33□□□□□ -0.28
TPM1-220ENST00000559556 CSNK1G3Q9Y6M4 447 aa13.33□□□□□ -0.28
TPM1-220ENST00000559556 NBASA2RRP1 2371 aa13.33□□□□□ -0.28
TPM1-220ENST00000559556 GOLGA8SH3BPF8 625 aa13.32□□□□□ -0.28
TPM1-220ENST00000559556 SPINT1O43278 529 aa13.32□□□□□ -0.28
TPM1-220ENST00000559556 TSPAN6O43657 245 aa13.32□□□□□ -0.28
TPM1-220ENST00000559556 USP12O75317 370 aa13.32□□□□□ -0.28
TPM1-220ENST00000559556 MYF5P13349 255 aa13.32□□□□□ -0.28
TPM1-220ENST00000559556 PRKCSHP14314 528 aaPredicted RBP13.32□□□□□ -0.28
TPM1-220ENST00000559556 ABL2P42684 1182 aa13.32□□□□□ -0.28
TPM1-220ENST00000559556 GEMIN4P57678 1058 aaKnown RBP13.32□□□□□ -0.28
TPM1-220ENST00000559556 UBE2HP62256 183 aa13.32□□□□□ -0.28
TPM1-220ENST00000559556 CXADRP78310 365 aa13.32□□□□□ -0.28
TPM1-220ENST00000559556 VWA3BQ502W6 1294 aa13.32□□□□□ -0.28
TPM1-220ENST00000559556 KLHDC7AQ5VTJ3 777 aa13.32□□□□□ -0.28
TPM1-220ENST00000559556 TAF3Q5VWG9 929 aa13.32□□□□□ -0.28
TPM1-220ENST00000559556 PCSK4Q6UW60 755 aa13.32□□□□□ -0.28
TPM1-220ENST00000559556 NOP9Q86U38 636 aaKnown RBP13.32□□□□□ -0.28
TPM1-220ENST00000559556 DRC7Q8IY82 874 aa13.32□□□□□ -0.28
TPM1-220ENST00000559556 ASB12Q8WXK4 309 aa13.32□□□□□ -0.28
TPM1-220ENST00000559556 VOPP1Q96AW1 172 aa13.32□□□□□ -0.28
TPM1-220ENST00000559556 TM6SF2Q9BZW4 377 aa13.32□□□□□ -0.28
TPM1-220ENST00000559556 NDFIP2Q9NV92 336 aa13.32□□□□□ -0.28
TPM1-220ENST00000559556 KLF15Q9UIH9 416 aa13.32□□□□□ -0.28
TPM1-220ENST00000559556 NEU3Q9UQ49 428 aa13.32□□□□□ -0.28
TPM1-220ENST00000559556 DOPEY2Q9Y3R5 2298 aa13.32□□□□□ -0.28
TPM1-220ENST00000559556 ZNF106Q9H2Y7 1883 aaKnown RBP13.31□□□□□ -0.28
TPM1-220ENST00000559556 C16orf96A6NNT2 1141 aa13.31□□□□□ -0.28
TPM1-220ENST00000559556 F8VZ95 297 aa13.31□□□□□ -0.28
TPM1-220ENST00000559556 ERVH48-1M5A8F1 160 aa13.31□□□□□ -0.28
TPM1-220ENST00000559556 FPGTO14772 594 aa13.31□□□□□ -0.28
TPM1-220ENST00000559556 AQP9O43315 295 aa13.31□□□□□ -0.28
TPM1-220ENST00000559556 GSRP00390 522 aa13.31□□□□□ -0.28
TPM1-220ENST00000559556 MMEP08473 750 aa13.31□□□□□ -0.28
TPM1-220ENST00000559556 UCHL3P15374 230 aa13.31□□□□□ -0.28
TPM1-220ENST00000559556 ACVRL1P37023 503 aa13.31□□□□□ -0.28
TPM1-220ENST00000559556 MAPKAPK2P49137 400 aa13.31□□□□□ -0.28
TPM1-220ENST00000559556 DNA2P51530 1060 aa13.31□□□□□ -0.28
TPM1-220ENST00000559556 UCNP55089 124 aa13.31□□□□□ -0.28
TPM1-220ENST00000559556 TMPRSS3P57727 454 aa13.31□□□□□ -0.28
TPM1-220ENST00000559556 PFN3P60673 137 aa13.31□□□□□ -0.28
TPM1-220ENST00000559556 PDE1CQ14123 709 aaPredicted RBP13.31□□□□□ -0.28
TPM1-220ENST00000559556 ZNF805Q5CZA5 627 aa13.31□□□□□ -0.28
TPM1-220ENST00000559556 TPRG1LQ5T0D9 272 aa13.31□□□□□ -0.28
TPM1-220ENST00000559556 NLRP14Q86W24 1093 aa13.31□□□□□ -0.28
TPM1-220ENST00000559556 ZNF843Q8N446 348 aa13.31□□□□□ -0.28
TPM1-220ENST00000559556 MAPK15Q8TD08 544 aa13.31□□□□□ -0.28
TPM1-220ENST00000559556 ARHGEF2Q92974 986 aaKnown RBP13.31□□□□□ -0.28
TPM1-220ENST00000559556 ARHGEF26Q96DR7 871 aa13.31□□□□□ -0.28
TPM1-220ENST00000559556 METTL5Q9NRN9 209 aaKnown RBP13.31□□□□□ -0.28
TPM1-220ENST00000559556 TMEM248Q9NWD8 314 aa13.31□□□□□ -0.28
TPM1-220ENST00000559556 OR12D3Q9UGF7 316 aa13.31□□□□□ -0.28
TPM1-220ENST00000559556 GGT7Q9UJ14 662 aa13.31□□□□□ -0.28
TPM1-220ENST00000559556 SALL4Q9UJQ4 1053 aa13.31□□□□□ -0.28
TPM1-220ENST00000559556 ACTL7AQ9Y615 435 aa13.31□□□□□ -0.28
TPM1-220ENST00000559556 FAM170AA1A519 330 aa13.3□□□□□ -0.28
TPM1-220ENST00000559556 EME2A4GXA9 379 aaPredicted RBP13.3□□□□□ -0.28
TPM1-220ENST00000559556 IGLON5A6NGN9 336 aa13.3□□□□□ -0.28
TPM1-220ENST00000559556 TPP1O14773 563 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms