RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 C10orf142B7Z368 130 aa15.02■□□□□ -0
SNRPA1-207ENST00000559309 H7C0C1 242 aa15.02■□□□□ -0
SNRPA1-207ENST00000559309 RNF103O00237 685 aa15.02■□□□□ -0
SNRPA1-207ENST00000559309 ATG13O75143 517 aa15.02■□□□□ -0
SNRPA1-207ENST00000559309 URI1O94763 535 aaPredicted RBP15.02■□□□□ -0
SNRPA1-207ENST00000559309 TDGF1P13385 188 aa15.02■□□□□ -0
SNRPA1-207ENST00000559309 CES1P23141 567 aa15.02■□□□□ -0
SNRPA1-207ENST00000559309 PAFAH1B1P43034 410 aa15.02■□□□□ -0
SNRPA1-207ENST00000559309 ATP5OP48047 213 aa15.02■□□□□ -0
SNRPA1-207ENST00000559309 KCNJ1P48048 391 aa15.02■□□□□ -0
SNRPA1-207ENST00000559309 NIPAL4Q0D2K0 466 aa15.02■□□□□ -0
SNRPA1-207ENST00000559309 ELAVL3Q14576 367 aaKnown RBP15.02■□□□□ -0
SNRPA1-207ENST00000559309 FNDC3BQ53EP0 1204 aaKnown RBP15.02■□□□□ -0
SNRPA1-207ENST00000559309 KIAA1211LQ6NV74 962 aa15.02■□□□□ -0
SNRPA1-207ENST00000559309 DARS2Q6PI48 645 aaKnown RBP15.02■□□□□ -0
SNRPA1-207ENST00000559309 NCEH1Q6PIU2 408 aa15.02■□□□□ -0
SNRPA1-207ENST00000559309 DPY19L3Q6ZPD9 716 aa15.02■□□□□ -0
SNRPA1-207ENST00000559309 PRPF39Q86UA1 669 aaKnown RBP15.02■□□□□ -0
SNRPA1-207ENST00000559309 ZNF366Q8N895 744 aa15.02■□□□□ -0
SNRPA1-207ENST00000559309 ATL2Q8NHH9 583 aa15.02■□□□□ -0
SNRPA1-207ENST00000559309 IMP4Q96G21 291 aaKnown RBP15.02■□□□□ -0
SNRPA1-207ENST00000559309 LRIG1Q96JA1 1093 aa15.02■□□□□ -0
SNRPA1-207ENST00000559309 SPATA13Q96N96 652 aa15.02■□□□□ -0
SNRPA1-207ENST00000559309 PRRX2Q99811 253 aa15.02■□□□□ -0
SNRPA1-207ENST00000559309 PPM1HQ9ULR3 514 aa15.02■□□□□ -0
SNRPA1-207ENST00000559309 CFAP54Q96N23 3096 aa15.01□□□□□ -0.01
SNRPA1-207ENST00000559309 TSPAN11A1L157 253 aa15.01□□□□□ -0.01
SNRPA1-207ENST00000559309 BHMG1C9JSJ3 638 aaPredicted RBP15.01□□□□□ -0.01
SNRPA1-207ENST00000559309 TRAFD1O14545 582 aaPredicted RBP15.01□□□□□ -0.01
SNRPA1-207ENST00000559309 KCNN4O15554 427 aa15.01□□□□□ -0.01
SNRPA1-207ENST00000559309 ZBTB24O43167 697 aaPredicted RBP15.01□□□□□ -0.01
SNRPA1-207ENST00000559309 OPHN1O60890 802 aa15.01□□□□□ -0.01
SNRPA1-207ENST00000559309 GJB3O75712 270 aa15.01□□□□□ -0.01
SNRPA1-207ENST00000559309 EPHX1P07099 455 aa15.01□□□□□ -0.01
SNRPA1-207ENST00000559309 CTSLP07711 333 aa15.01□□□□□ -0.01
SNRPA1-207ENST00000559309 HOXB2P14652 356 aa15.01□□□□□ -0.01
SNRPA1-207ENST00000559309 HOXA6P31267 233 aa15.01□□□□□ -0.01
SNRPA1-207ENST00000559309 CCNHP51946 323 aaPredicted RBP15.01□□□□□ -0.01
SNRPA1-207ENST00000559309 RHOAP61586 193 aa15.01□□□□□ -0.01
SNRPA1-207ENST00000559309 AP1S1P61966 158 aa15.01□□□□□ -0.01
SNRPA1-207ENST00000559309 SNRPD1P62314 119 aaKnown RBP15.01□□□□□ -0.01
SNRPA1-207ENST00000559309 MTAPQ13126 283 aa15.01□□□□□ -0.01
SNRPA1-207ENST00000559309 MYLK3Q32MK0 819 aa15.01□□□□□ -0.01
SNRPA1-207ENST00000559309 ANKRD20A2Q5SQ80 823 aa15.01□□□□□ -0.01
SNRPA1-207ENST00000559309 ANKRD20A1Q5TYW2 823 aa15.01□□□□□ -0.01
SNRPA1-207ENST00000559309 ANKRD20A3Q5VUR7 823 aa15.01□□□□□ -0.01
SNRPA1-207ENST00000559309 CCDC137Q6PK04 289 aaKnown RBP15.01□□□□□ -0.01
SNRPA1-207ENST00000559309 RASSF3Q86WH2 238 aa15.01□□□□□ -0.01
SNRPA1-207ENST00000559309 ZNF354CQ86Y25 554 aa15.01□□□□□ -0.01
SNRPA1-207ENST00000559309 FBXL6Q8N531 539 aa15.01□□□□□ -0.01
SNRPA1-207ENST00000559309 TMEM105Q8N8V8 129 aa15.01□□□□□ -0.01
SNRPA1-207ENST00000559309 FAM71DQ8N9W8 422 aa15.01□□□□□ -0.01
SNRPA1-207ENST00000559309 CHST14Q8NCH0 376 aa15.01□□□□□ -0.01
SNRPA1-207ENST00000559309 TMIEQ8NEW7 156 aa15.01□□□□□ -0.01
SNRPA1-207ENST00000559309 PRSS33Q8NF86 280 aa15.01□□□□□ -0.01
SNRPA1-207ENST00000559309 NSMCE1Q8WV22 266 aa15.01□□□□□ -0.01
SNRPA1-207ENST00000559309 MAGOHBQ96A72 148 aaKnown RBP15.01□□□□□ -0.01
SNRPA1-207ENST00000559309 ECHDC3Q96DC8 303 aa15.01□□□□□ -0.01
SNRPA1-207ENST00000559309 GDAP1L1Q96MZ0 367 aa15.01□□□□□ -0.01
SNRPA1-207ENST00000559309 FCRL5Q96RD9 977 aa15.01□□□□□ -0.01
SNRPA1-207ENST00000559309 CINPQ9BW66 212 aaPredicted RBP15.01□□□□□ -0.01
SNRPA1-207ENST00000559309 POLR1EQ9GZS1 481 aaKnown RBP15.01□□□□□ -0.01
SNRPA1-207ENST00000559309 DDX47Q9H0S4 455 aaKnown RBP15.01□□□□□ -0.01
SNRPA1-207ENST00000559309 SLC25A51Q9H1U9 297 aa15.01□□□□□ -0.01
SNRPA1-207ENST00000559309 TNKS2Q9H2K2 1166 aa15.01□□□□□ -0.01
SNRPA1-207ENST00000559309 GLOD4Q9HC38 313 aa15.01□□□□□ -0.01
SNRPA1-207ENST00000559309 NT5MQ9NPB1 228 aa15.01□□□□□ -0.01
SNRPA1-207ENST00000559309 PLXND1Q9Y4D7 1925 aa15.01□□□□□ -0.01
SNRPA1-207ENST00000559309 GOLGA6L10A0A0M3HER8 536 aa15□□□□□ -0.01
SNRPA1-207ENST00000559309 K7ESF4 209 aa15□□□□□ -0.01
SNRPA1-207ENST00000559309 INSIG1O15503 277 aa15□□□□□ -0.01
SNRPA1-207ENST00000559309 HTRA2O43464 458 aaPredicted RBP15□□□□□ -0.01
SNRPA1-207ENST00000559309 FZD6O60353 706 aa15□□□□□ -0.01
SNRPA1-207ENST00000559309 POP4O95707 220 aaKnown RBP15□□□□□ -0.01
SNRPA1-207ENST00000559309 IGSF6O95976 241 aa15□□□□□ -0.01
SNRPA1-207ENST00000559309 DCNP07585 359 aaKnown RBP15□□□□□ -0.01
SNRPA1-207ENST00000559309 MAPK8P45983 427 aa15□□□□□ -0.01
SNRPA1-207ENST00000559309 DGKEP52429 567 aa15□□□□□ -0.01
SNRPA1-207ENST00000559309 PTPN5P54829 565 aa15□□□□□ -0.01
SNRPA1-207ENST00000559309 SKOR1P84550 965 aa15□□□□□ -0.01
SNRPA1-207ENST00000559309 SNX1Q13596 522 aa15□□□□□ -0.01
SNRPA1-207ENST00000559309 ZNF235Q14590 738 aa15□□□□□ -0.01
SNRPA1-207ENST00000559309 FAM182AQ5T1J6 154 aa15□□□□□ -0.01
SNRPA1-207ENST00000559309 ATXN7L2Q5T6C5 722 aaPredicted RBP15□□□□□ -0.01
SNRPA1-207ENST00000559309 SRLQ86TD4 932 aa15□□□□□ -0.01
SNRPA1-207ENST00000559309 BBS5Q8N3I7 341 aa15□□□□□ -0.01
SNRPA1-207ENST00000559309 FLCNQ8NFG4 579 aa15□□□□□ -0.01
SNRPA1-207ENST00000559309 OR2T3Q8NH03 318 aa15□□□□□ -0.01
SNRPA1-207ENST00000559309 HCAR2Q8TDS4 363 aa15□□□□□ -0.01
SNRPA1-207ENST00000559309 ZNF592Q92610 1267 aa15□□□□□ -0.01
SNRPA1-207ENST00000559309 PBXIP1Q96AQ6 731 aa15□□□□□ -0.01
SNRPA1-207ENST00000559309 TUBGCP5Q96RT8 1024 aa15□□□□□ -0.01
SNRPA1-207ENST00000559309 CEP41Q9BYV8 373 aa15□□□□□ -0.01
SNRPA1-207ENST00000559309 MKRN2Q9H000 416 aaKnown RBP15□□□□□ -0.01
SNRPA1-207ENST00000559309 GBA3Q9H227 469 aa15□□□□□ -0.01
SNRPA1-207ENST00000559309 NOD2Q9HC29 1040 aa15□□□□□ -0.01
SNRPA1-207ENST00000559309 PCDH9Q9HC56 1237 aa15□□□□□ -0.01
SNRPA1-207ENST00000559309 PRMT8Q9NR22 394 aaPredicted RBP15□□□□□ -0.01
SNRPA1-207ENST00000559309 POLR3BQ9NW08 1133 aaPredicted RBP15□□□□□ -0.01
SNRPA1-207ENST00000559309 HECAQ9UBI9 543 aaPredicted RBP15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms