RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 KDM1BQ8NB78 822 aa18.33■□□□□ 0.53
CLPX-203ENST00000558958 FRS2Q8WU20 508 aa18.33■□□□□ 0.53
CLPX-203ENST00000558958 UCMAQ8WVF2 138 aa18.33■□□□□ 0.53
CLPX-203ENST00000558958 TADA1Q96BN2 335 aa18.33■□□□□ 0.53
CLPX-203ENST00000558958 EXOC2Q96KP1 924 aa18.33■□□□□ 0.53
CLPX-203ENST00000558958 ASB2Q96Q27 587 aa18.33■□□□□ 0.53
CLPX-203ENST00000558958 NUDCD1Q96RS6 583 aa18.33■□□□□ 0.53
CLPX-203ENST00000558958 RBM15Q96T37 977 aaKnown RBP eCLIP18.33■□□□□ 0.53
CLPX-203ENST00000558958 MLPHQ9BV36 600 aaPredicted RBP18.33■□□□□ 0.53
CLPX-203ENST00000558958 EIF2B3Q9NR50 452 aaKnown RBP18.33■□□□□ 0.53
CLPX-203ENST00000558958 ZDHHC18Q9NUE0 388 aa18.33■□□□□ 0.53
CLPX-203ENST00000558958 RAB21Q9UL25 225 aa18.33■□□□□ 0.53
CLPX-203ENST00000558958 SORCS3Q9UPU3 1222 aa18.33■□□□□ 0.53
CLPX-203ENST00000558958 AAR2Q9Y312 384 aaKnown RBP18.33■□□□□ 0.53
CLPX-203ENST00000558958 STARD13Q9Y3M8 1113 aa18.33■□□□□ 0.53
CLPX-203ENST00000558958 TCRBV7S3A2A0A539 114 aa18.33■□□□□ 0.52
CLPX-203ENST00000558958 TTC24A2A3L6 582 aaPredicted RBP18.33■□□□□ 0.52
CLPX-203ENST00000558958 SHISA7A6NL88 538 aa18.33■□□□□ 0.52
CLPX-203ENST00000558958 E7EVH7 732 aa18.33■□□□□ 0.52
CLPX-203ENST00000558958 GJB3O75712 270 aa18.33■□□□□ 0.52
CLPX-203ENST00000558958 MT-CYBP00156 380 aaPredicted RBP18.33■□□□□ 0.52
CLPX-203ENST00000558958 APRTP07741 180 aa18.33■□□□□ 0.52
CLPX-203ENST00000558958 TPSB2P20231 275 aa18.33■□□□□ 0.52
CLPX-203ENST00000558958 ECHS1P30084 290 aa18.33■□□□□ 0.52
CLPX-203ENST00000558958 CD86P42081 329 aa18.33■□□□□ 0.52
CLPX-203ENST00000558958 CSNK1DP48730 415 aa18.33■□□□□ 0.52
CLPX-203ENST00000558958 SCNN1BP51168 640 aa18.33■□□□□ 0.52
CLPX-203ENST00000558958 PLTPP55058 493 aa18.33■□□□□ 0.52
CLPX-203ENST00000558958 ST8SIA6P61647 398 aa18.33■□□□□ 0.52
CLPX-203ENST00000558958 CAV1Q03135 178 aa18.33■□□□□ 0.52
CLPX-203ENST00000558958 IHHQ14623 411 aa18.33■□□□□ 0.52
CLPX-203ENST00000558958 PON2Q15165 354 aa18.33■□□□□ 0.52
CLPX-203ENST00000558958 TPSAB1Q15661 275 aa18.33■□□□□ 0.52
CLPX-203ENST00000558958 ACCSLQ4AC99 568 aa18.33■□□□□ 0.52
CLPX-203ENST00000558958 TMEM196Q5HYL7 178 aa18.33■□□□□ 0.52
CLPX-203ENST00000558958 SYCP2LQ5T4T6 812 aa18.33■□□□□ 0.52
CLPX-203ENST00000558958 ATXN7L2Q5T6C5 722 aaPredicted RBP18.33■□□□□ 0.52
CLPX-203ENST00000558958 KCTD11Q693B1 232 aa18.33■□□□□ 0.52
CLPX-203ENST00000558958 RNF135Q8IUD6 432 aa18.33■□□□□ 0.52
CLPX-203ENST00000558958 PDCD7Q8N8D1 485 aaKnown RBP18.33■□□□□ 0.52
CLPX-203ENST00000558958 EIF1ADQ8N9N8 165 aaKnown RBP18.33■□□□□ 0.52
CLPX-203ENST00000558958 FBXO25Q8TCJ0 367 aa18.33■□□□□ 0.52
CLPX-203ENST00000558958 PRCCQ92733 491 aaPredicted RBP18.33■□□□□ 0.52
CLPX-203ENST00000558958 EZH1Q92800 747 aaPredicted RBP18.33■□□□□ 0.52
CLPX-203ENST00000558958 FAM129AQ9BZQ8 928 aa18.33■□□□□ 0.52
CLPX-203ENST00000558958 TM6SF2Q9BZW4 377 aa18.33■□□□□ 0.52
CLPX-203ENST00000558958 NOD2Q9HC29 1040 aa18.33■□□□□ 0.52
CLPX-203ENST00000558958 VPS45Q9NRW7 570 aa18.33■□□□□ 0.52
CLPX-203ENST00000558958 UBP1Q9NZI7 540 aa18.33■□□□□ 0.52
CLPX-203ENST00000558958 HCN2Q9UL51 889 aa18.33■□□□□ 0.52
CLPX-203ENST00000558958 SHOC2Q9UQ13 582 aa18.33■□□□□ 0.52
CLPX-203ENST00000558958 ERI2A8K979 691 aaKnown RBP18.32■□□□□ 0.52
CLPX-203ENST00000558958 TTC34A8MYJ7 566 aa18.32■□□□□ 0.52
CLPX-203ENST00000558958 K7EQS6 105 aa18.32■□□□□ 0.52
CLPX-203ENST00000558958 SMAPO00193 183 aa18.32■□□□□ 0.52
CLPX-203ENST00000558958 INSIG1O15503 277 aa18.32■□□□□ 0.52
CLPX-203ENST00000558958 TMEM63AO94886 807 aa18.32■□□□□ 0.52
CLPX-203ENST00000558958 AP2A1O95782 977 aa18.32■□□□□ 0.52
CLPX-203ENST00000558958 GSRP00390 522 aa18.32■□□□□ 0.52
CLPX-203ENST00000558958 MCM3P25205 808 aa18.32■□□□□ 0.52
CLPX-203ENST00000558958 GEMP55040 296 aa18.32■□□□□ 0.52
CLPX-203ENST00000558958 SKOR1P84550 965 aa18.32■□□□□ 0.52
CLPX-203ENST00000558958 CDK16Q00536 496 aa18.32■□□□□ 0.52
CLPX-203ENST00000558958 RALGPS1Q5JS13 557 aa18.32■□□□□ 0.52
CLPX-203ENST00000558958 CCNI2Q6ZMN8 369 aaPredicted RBP18.32■□□□□ 0.52
CLPX-203ENST00000558958 PLPP6Q8IY26 295 aa18.32■□□□□ 0.52
CLPX-203ENST00000558958 OR2AP1Q8NGE2 309 aa18.32■□□□□ 0.52
CLPX-203ENST00000558958 NEUROG2Q9H2A3 272 aa18.32■□□□□ 0.52
CLPX-203ENST00000558958 TNKS2Q9H2K2 1166 aa18.32■□□□□ 0.52
CLPX-203ENST00000558958 SCUBE2Q9NQ36 999 aa18.32■□□□□ 0.52
CLPX-203ENST00000558958 THAP10Q9P2Z0 257 aaPredicted RBP18.32■□□□□ 0.52
CLPX-203ENST00000558958 FAM153AQ9UHL3 310 aa18.32■□□□□ 0.52
CLPX-203ENST00000558958 NFU1Q9UMS0 254 aa18.32■□□□□ 0.52
CLPX-203ENST00000558958 SLC8A2Q9UPR5 921 aa18.32■□□□□ 0.52
CLPX-203ENST00000558958 GOLGA6CA6NDK9 693 aa18.31■□□□□ 0.52
CLPX-203ENST00000558958 GOLGA6BA6NDN3 693 aa18.31■□□□□ 0.52
CLPX-203ENST00000558958 ANTXRLA6NF34 631 aa18.31■□□□□ 0.52
CLPX-203ENST00000558958 PSMD3O43242 534 aa18.31■□□□□ 0.52
CLPX-203ENST00000558958 IGSF6O95976 241 aa18.31■□□□□ 0.52
CLPX-203ENST00000558958 SERPINF2P08697 491 aa18.31■□□□□ 0.52
CLPX-203ENST00000558958 GOLGA6DP0CG33 693 aa18.31■□□□□ 0.52
CLPX-203ENST00000558958 HNRNPLP14866 589 aaKnown RBP eCLIP18.31■□□□□ 0.52
CLPX-203ENST00000558958 DRD1P21728 446 aa18.31■□□□□ 0.52
CLPX-203ENST00000558958 LMAN1P49257 510 aa18.31■□□□□ 0.52
CLPX-203ENST00000558958 SNRPD1P62314 119 aaKnown RBP18.31■□□□□ 0.52
CLPX-203ENST00000558958 MPP3Q13368 585 aa18.31■□□□□ 0.52
CLPX-203ENST00000558958 HLTFQ14527 1009 aaKnown RBP eCLIP18.31■□□□□ 0.52
CLPX-203ENST00000558958 ZNF234Q14588 700 aa18.31■□□□□ 0.52
CLPX-203ENST00000558958 SLC14A2Q15849 920 aa18.31■□□□□ 0.52
CLPX-203ENST00000558958 FNDC3BQ53EP0 1204 aaKnown RBP18.31■□□□□ 0.52
CLPX-203ENST00000558958 FSTL4Q6MZW2 842 aa18.31■□□□□ 0.52
CLPX-203ENST00000558958 KDELC1Q6UW63 502 aa18.31■□□□□ 0.52
CLPX-203ENST00000558958 SRLQ86TD4 932 aa18.31■□□□□ 0.52
CLPX-203ENST00000558958 NSMCE3Q96MG7 304 aa18.31■□□□□ 0.52
CLPX-203ENST00000558958 GDAP1L1Q96MZ0 367 aa18.31■□□□□ 0.52
CLPX-203ENST00000558958 TMEM245Q9H330 911 aa18.31■□□□□ 0.52
CLPX-203ENST00000558958 GOLGA6AQ9NYA3 693 aa18.31■□□□□ 0.52
CLPX-203ENST00000558958 UQCRHLA0A096LP55 91 aa18.3■□□□□ 0.52
CLPX-203ENST00000558958 PMPCBO75439 489 aa18.3■□□□□ 0.52
CLPX-203ENST00000558958 SUN1O94901 812 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms