RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 A0A1W2PRG0 241 aa4.68□□□□□ -1.66
CASC4-206ENST00000558847 SLC22A23A1A5C7 686 aa4.68□□□□□ -1.66
CASC4-206ENST00000558847 PABPN1LA6NDY0 278 aaKnown RBP4.68□□□□□ -1.66
CASC4-206ENST00000558847 CXorf65A6NEN9 183 aa4.68□□□□□ -1.66
CASC4-206ENST00000558847 LIPT2A6NK58 231 aa4.68□□□□□ -1.66
CASC4-206ENST00000558847 LINC01548A6NM66 108 aa4.68□□□□□ -1.66
CASC4-206ENST00000558847 BCAT2O15382 392 aaPredicted RBP4.68□□□□□ -1.66
CASC4-206ENST00000558847 DOK2O60496 412 aa4.68□□□□□ -1.66
CASC4-206ENST00000558847 TMCC1O94876 653 aa4.68□□□□□ -1.66
CASC4-206ENST00000558847 CERS1P27544 350 aa4.68□□□□□ -1.66
CASC4-206ENST00000558847 HOXD13P35453 343 aa4.68□□□□□ -1.66
CASC4-206ENST00000558847 PSMB10P40306 273 aa4.68□□□□□ -1.66
CASC4-206ENST00000558847 GPR12P47775 334 aa4.68□□□□□ -1.66
CASC4-206ENST00000558847 ARSFP54793 590 aa4.68□□□□□ -1.66
CASC4-206ENST00000558847 RPS13P62277 151 aaKnown RBP4.68□□□□□ -1.66
CASC4-206ENST00000558847 AIMP2Q13155 320 aaKnown RBP4.68□□□□□ -1.66
CASC4-206ENST00000558847 STIM1Q13586 685 aa4.68□□□□□ -1.66
CASC4-206ENST00000558847 VEPH1Q14D04 833 aa4.68□□□□□ -1.66
CASC4-206ENST00000558847 WTAPQ15007 396 aa4.68□□□□□ -1.66
CASC4-206ENST00000558847 SLC9C1Q4G0N8 1177 aa4.68□□□□□ -1.66
CASC4-206ENST00000558847 RILPL1Q5EBL4 403 aa4.68□□□□□ -1.66
CASC4-206ENST00000558847 PAPD7Q5XG87 772 aaKnown RBP4.68□□□□□ -1.66
CASC4-206ENST00000558847 AAGABQ6PD74 315 aa4.68□□□□□ -1.66
CASC4-206ENST00000558847 CYP20A1Q6UW02 462 aa4.68□□□□□ -1.66
CASC4-206ENST00000558847 FAM57BQ71RH2 274 aa4.68□□□□□ -1.66
CASC4-206ENST00000558847 CCDC25Q86WR0 208 aa4.68□□□□□ -1.66
CASC4-206ENST00000558847 ADGRF4Q8IZF3 695 aa4.68□□□□□ -1.66
CASC4-206ENST00000558847 ARL14EPQ8N8R7 260 aaPredicted RBP4.68□□□□□ -1.66
CASC4-206ENST00000558847 C8orf58Q8NAV2 365 aa4.68□□□□□ -1.66
CASC4-206ENST00000558847 CADM4Q8NFZ8 388 aa4.68□□□□□ -1.66
CASC4-206ENST00000558847 GDPD5Q8WTR4 605 aa4.68□□□□□ -1.66
CASC4-206ENST00000558847 IP6K1Q92551 441 aa4.68□□□□□ -1.66
CASC4-206ENST00000558847 DPF1Q92782 380 aa4.68□□□□□ -1.66
CASC4-206ENST00000558847 MAP4K1Q92918 833 aa4.68□□□□□ -1.66
CASC4-206ENST00000558847 PIP5K1AQ99755 562 aa4.68□□□□□ -1.66
CASC4-206ENST00000558847 TUBB6Q9BUF5 446 aa4.68□□□□□ -1.66
CASC4-206ENST00000558847 ITPAQ9BY32 194 aa4.68□□□□□ -1.66
CASC4-206ENST00000558847 SEMA4CQ9C0C4 833 aa4.68□□□□□ -1.66
CASC4-206ENST00000558847 GHITMQ9H3K2 345 aa4.68□□□□□ -1.66
CASC4-206ENST00000558847 HIPK3Q9H422 1215 aa4.68□□□□□ -1.66
CASC4-206ENST00000558847 SLC32A1Q9H598 525 aa4.68□□□□□ -1.66
CASC4-206ENST00000558847 SH2D4AQ9H788 454 aa4.68□□□□□ -1.66
CASC4-206ENST00000558847 MOV10Q9HCE1 1003 aaKnown RBP4.68□□□□□ -1.66
CASC4-206ENST00000558847 SNTG1Q9NSN8 517 aa4.68□□□□□ -1.66
CASC4-206ENST00000558847 CLIC5Q9NZA1 410 aa4.68□□□□□ -1.66
CASC4-206ENST00000558847 NCKIPSDQ9NZQ3 722 aa4.68□□□□□ -1.66
CASC4-206ENST00000558847 ZNF70Q9UC06 446 aaPredicted RBP4.68□□□□□ -1.66
CASC4-206ENST00000558847 A4GNTQ9UNA3 340 aa4.68□□□□□ -1.66
CASC4-206ENST00000558847 SLC4A4Q9Y6R1 1079 aa4.68□□□□□ -1.66
CASC4-206ENST00000558847 A0A096LPK6 155 aa4.67□□□□□ -1.66
CASC4-206ENST00000558847 MANSC4A6NHS7 340 aaPredicted RBP4.67□□□□□ -1.66
CASC4-206ENST00000558847 C2CD4BA6NLJ0 364 aa4.67□□□□□ -1.66
CASC4-206ENST00000558847 MYO1GB0I1T2 1018 aa4.67□□□□□ -1.66
CASC4-206ENST00000558847 B4DLN1 442 aa4.67□□□□□ -1.66
CASC4-206ENST00000558847 USP17L23D6RBM5 183 aa4.67□□□□□ -1.66
CASC4-206ENST00000558847 RHODO00212 210 aa4.67□□□□□ -1.66
CASC4-206ENST00000558847 TAF4O00268 1085 aa4.67□□□□□ -1.66
CASC4-206ENST00000558847 EBAG9O00559 213 aa4.67□□□□□ -1.66
CASC4-206ENST00000558847 TCERG1O14776 1098 aaKnown RBP4.67□□□□□ -1.66
CASC4-206ENST00000558847 HNRNPCL1O60812 293 aaKnown RBP4.67□□□□□ -1.66
CASC4-206ENST00000558847 TMCC2O75069 709 aa4.67□□□□□ -1.66
CASC4-206ENST00000558847 TACC1O75410 805 aa4.67□□□□□ -1.66
CASC4-206ENST00000558847 NEURL1O76050 574 aa4.67□□□□□ -1.66
CASC4-206ENST00000558847 EIF2S1P05198 315 aaKnown RBP4.67□□□□□ -1.66
CASC4-206ENST00000558847 HEXAP06865 529 aa4.67□□□□□ -1.66
CASC4-206ENST00000558847 MMP3P08254 477 aa4.67□□□□□ -1.66
CASC4-206ENST00000558847 NHLRC4P0CG21 123 aaPredicted RBP4.67□□□□□ -1.66
CASC4-206ENST00000558847 SLC2A4P14672 509 aa4.67□□□□□ -1.66
CASC4-206ENST00000558847 KLRC2P26717 231 aa4.67□□□□□ -1.66
CASC4-206ENST00000558847 CIITAP33076 1130 aa4.67□□□□□ -1.66
CASC4-206ENST00000558847 SLC16A2P36021 539 aa4.67□□□□□ -1.66
CASC4-206ENST00000558847 PPARGP37231 505 aaPredicted RBP4.67□□□□□ -1.66
CASC4-206ENST00000558847 YPEL5P62699 121 aa4.67□□□□□ -1.66
CASC4-206ENST00000558847 PMPCAQ10713 525 aa4.67□□□□□ -1.66
CASC4-206ENST00000558847 FOXF2Q12947 444 aa4.67□□□□□ -1.66
CASC4-206ENST00000558847 CHAF1BQ13112 559 aa4.67□□□□□ -1.66
CASC4-206ENST00000558847 ACVR2BQ13705 512 aa4.67□□□□□ -1.66
CASC4-206ENST00000558847 TOMM20Q15388 145 aa4.67□□□□□ -1.66
CASC4-206ENST00000558847 EARS2Q5JPH6 523 aaKnown RBP4.67□□□□□ -1.66
CASC4-206ENST00000558847 MEX3CQ5U5Q3 659 aaKnown RBP4.67□□□□□ -1.66
CASC4-206ENST00000558847 CPLX2Q6PUV4 134 aaKnown RBP4.67□□□□□ -1.66
CASC4-206ENST00000558847 IKBIPQ70UQ0 350 aa4.67□□□□□ -1.66
CASC4-206ENST00000558847 CNTROBQ8N137 903 aa4.67□□□□□ -1.66
CASC4-206ENST00000558847 TMEM217Q8N7C4 229 aa4.67□□□□□ -1.66
CASC4-206ENST00000558847 FRMD1Q8N878 549 aa4.67□□□□□ -1.66
CASC4-206ENST00000558847 C1orf131Q8NDD1 294 aaKnown RBP4.67□□□□□ -1.66
CASC4-206ENST00000558847 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.67□□□□□ -1.66
CASC4-206ENST00000558847 KCNG4Q8TDN1 519 aa4.67□□□□□ -1.66
CASC4-206ENST00000558847 INTS12Q96CB8 462 aaKnown RBP4.67□□□□□ -1.66
CASC4-206ENST00000558847 ZNF333Q96JL9 665 aa4.67□□□□□ -1.66
CASC4-206ENST00000558847 FEM1CQ96JP0 617 aa4.67□□□□□ -1.66
CASC4-206ENST00000558847 STRA6Q9BX79 667 aa4.67□□□□□ -1.66
CASC4-206ENST00000558847 SLC29A3Q9BZD2 475 aa4.67□□□□□ -1.66
CASC4-206ENST00000558847 SEPT11Q9NVA2 429 aaKnown RBP4.67□□□□□ -1.66
CASC4-206ENST00000558847 RNF7Q9UBF6 113 aa4.67□□□□□ -1.66
CASC4-206ENST00000558847 HSPB7Q9UBY9 170 aa4.67□□□□□ -1.66
CASC4-206ENST00000558847 TMEM5Q9Y2B1 443 aa4.67□□□□□ -1.66
CASC4-206ENST00000558847 CARD8Q9Y2G2 431 aa4.67□□□□□ -1.66
CASC4-206ENST00000558847 UTYO14607 1347 aa4.67□□□□□ -1.66
CASC4-206ENST00000558847 CYP2D7A0A087X1C5 515 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms