RNA–Protein interactions for RNA: ENST00000558544.5

TPM1-214, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-214ENST00000558544 C1QTNF3-AMACRE9PGA6 284 aa17.69■□□□□ 0.42
TPM1-214ENST00000558544 H7C0C1 242 aa17.69■□□□□ 0.42
TPM1-214ENST00000558544 INSIG1O15503 277 aa17.69■□□□□ 0.42
TPM1-214ENST00000558544 LEFTY1O75610 366 aa17.69■□□□□ 0.42
TPM1-214ENST00000558544 GJB3O75712 270 aa17.69■□□□□ 0.42
TPM1-214ENST00000558544 NEBLO76041 1014 aa17.69■□□□□ 0.42
TPM1-214ENST00000558544 ADH1BP00325 375 aa17.69■□□□□ 0.42
TPM1-214ENST00000558544 SLC8A1P32418 973 aa17.69■□□□□ 0.42
TPM1-214ENST00000558544 ATP5OP48047 213 aa17.69■□□□□ 0.42
TPM1-214ENST00000558544 RENBPP51606 427 aa17.69■□□□□ 0.42
TPM1-214ENST00000558544 METAP1P53582 386 aa17.69■□□□□ 0.42
TPM1-214ENST00000558544 EIF3EP60228 445 aaKnown RBP17.69■□□□□ 0.42
TPM1-214ENST00000558544 MAXP61244 160 aa17.69■□□□□ 0.42
TPM1-214ENST00000558544 ZBTB17Q13105 803 aa17.69■□□□□ 0.42
TPM1-214ENST00000558544 MYLK3Q32MK0 819 aa17.69■□□□□ 0.42
TPM1-214ENST00000558544 ARSIQ5FYB1 569 aa17.69■□□□□ 0.42
TPM1-214ENST00000558544 TEX26Q8N6G2 289 aa17.69■□□□□ 0.42
TPM1-214ENST00000558544 RLN3Q8WXF3 142 aa17.69■□□□□ 0.42
TPM1-214ENST00000558544 C10orf88Q9H8K7 445 aa17.69■□□□□ 0.42
TPM1-214ENST00000558544 RBM22Q9NW64 420 aaKnown RBP eCLIP17.69■□□□□ 0.42
TPM1-214ENST00000558544 PPM1HQ9ULR3 514 aa17.69■□□□□ 0.42
TPM1-214ENST00000558544 CYP8B1Q9UNU6 501 aa17.69■□□□□ 0.42
TPM1-214ENST00000558544 INVSQ9Y283 1065 aa17.69■□□□□ 0.42
TPM1-214ENST00000558544 R3HDM2Q9Y2K5 976 aaKnown RBP17.69■□□□□ 0.42
TPM1-214ENST00000558544 TTLL3Q9Y4R7 772 aa17.69■□□□□ 0.42
TPM1-214ENST00000558544 HACD1B0YJ81 288 aa17.68■□□□□ 0.42
TPM1-214ENST00000558544 ESPNB1AK53 854 aa17.68■□□□□ 0.42
TPM1-214ENST00000558544 KPNA3O00505 521 aaPredicted RBP17.68■□□□□ 0.42
TPM1-214ENST00000558544 POP4O95707 220 aaKnown RBP17.68■□□□□ 0.42
TPM1-214ENST00000558544 JCHAINP01591 159 aa17.68■□□□□ 0.42
TPM1-214ENST00000558544 FGGP02679 453 aa17.68■□□□□ 0.42
TPM1-214ENST00000558544 PRNPP04156 253 aa17.68■□□□□ 0.42
TPM1-214ENST00000558544 HLA-DQB2P05538 268 aa17.68■□□□□ 0.42
TPM1-214ENST00000558544 HSPA9P38646 679 aaKnown RBP17.68■□□□□ 0.42
TPM1-214ENST00000558544 TPMTP51580 245 aa17.68■□□□□ 0.42
TPM1-214ENST00000558544 IFI35P80217 286 aaPredicted RBP17.68■□□□□ 0.42
TPM1-214ENST00000558544 ZBTB16Q05516 673 aa17.68■□□□□ 0.42
TPM1-214ENST00000558544 SRSF5Q13243 272 aaKnown RBP17.68■□□□□ 0.42
TPM1-214ENST00000558544 XRCC4Q13426 336 aa17.68■□□□□ 0.42
TPM1-214ENST00000558544 TTC31Q49AM3 519 aaPredicted RBP17.68■□□□□ 0.42
TPM1-214ENST00000558544 SLC45A4Q5BKX6 768 aa17.68■□□□□ 0.42
TPM1-214ENST00000558544 SRLQ86TD4 932 aa17.68■□□□□ 0.42
TPM1-214ENST00000558544 FRMD1Q8N878 549 aa17.68■□□□□ 0.42
TPM1-214ENST00000558544 TTC13Q8NBP0 860 aa17.68■□□□□ 0.42
TPM1-214ENST00000558544 TMIEQ8NEW7 156 aa17.68■□□□□ 0.42
TPM1-214ENST00000558544 OSBPL9Q96SU4 736 aa17.68■□□□□ 0.42
TPM1-214ENST00000558544 NAPGQ99747 312 aaPredicted RBP17.68■□□□□ 0.42
TPM1-214ENST00000558544 MGME1Q9BQP7 344 aa17.68■□□□□ 0.42
TPM1-214ENST00000558544 PABPC3Q9H361 631 aaKnown RBP17.68■□□□□ 0.42
TPM1-214ENST00000558544 USP36Q9P275 1121 aaKnown RBP17.68■□□□□ 0.42
TPM1-214ENST00000558544 HCN4Q9Y3Q4 1203 aa17.68■□□□□ 0.42
TPM1-214ENST00000558544 MUC6Q6W4X9 2439 aa17.68■□□□□ 0.42
TPM1-214ENST00000558544 ABCA7Q8IZY2 2146 aa17.68■□□□□ 0.42
TPM1-214ENST00000558544 A0A1W2PP55 124 aa17.67■□□□□ 0.42
TPM1-214ENST00000558544 PIGNO95427 931 aa17.67■□□□□ 0.42
TPM1-214ENST00000558544 C7P10643 843 aa17.67■□□□□ 0.42
TPM1-214ENST00000558544 RBP3P10745 1247 aa17.67■□□□□ 0.42
TPM1-214ENST00000558544 C5AR1P21730 350 aa17.67■□□□□ 0.42
TPM1-214ENST00000558544 SCNN1BP51168 640 aa17.67■□□□□ 0.42
TPM1-214ENST00000558544 RAD51Q06609 339 aa17.67■□□□□ 0.42
TPM1-214ENST00000558544 ITKQ08881 620 aa17.67■□□□□ 0.42
TPM1-214ENST00000558544 NSUN2Q08J23 767 aaKnown RBP eCLIP17.67■□□□□ 0.42
TPM1-214ENST00000558544 MAP7D1Q3KQU3 841 aa17.67■□□□□ 0.42
TPM1-214ENST00000558544 USP39Q53GS9 565 aaKnown RBP17.67■□□□□ 0.42
TPM1-214ENST00000558544 FAM46CQ5VWP2 391 aa17.67■□□□□ 0.42
TPM1-214ENST00000558544 FAM124AQ86V42 546 aa17.67■□□□□ 0.42
TPM1-214ENST00000558544 CDKL3Q8IVW4 592 aaPredicted RBP17.67■□□□□ 0.42
TPM1-214ENST00000558544 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.67■□□□□ 0.42
TPM1-214ENST00000558544 AADATQ8N5Z0 425 aa17.67■□□□□ 0.42
TPM1-214ENST00000558544 FAM160A2Q8N612 972 aaPredicted RBP17.67■□□□□ 0.42
TPM1-214ENST00000558544 ZBTB44Q8NCP5 570 aa17.67■□□□□ 0.42
TPM1-214ENST00000558544 GANCQ8TET4 914 aa17.67■□□□□ 0.42
TPM1-214ENST00000558544 ATG4AQ8WYN0 398 aa17.67■□□□□ 0.42
TPM1-214ENST00000558544 VOPP1Q96AW1 172 aa17.67■□□□□ 0.42
TPM1-214ENST00000558544 PBKQ96KB5 322 aa17.67■□□□□ 0.42
TPM1-214ENST00000558544 SPACA7Q96KW9 195 aa17.67■□□□□ 0.42
TPM1-214ENST00000558544 IL12RB2Q99665 862 aa17.67■□□□□ 0.42
TPM1-214ENST00000558544 POLR1EQ9GZS1 481 aaKnown RBP17.67■□□□□ 0.42
TPM1-214ENST00000558544 KCNH6Q9H252 994 aa17.67■□□□□ 0.42
TPM1-214ENST00000558544 SCUBE2Q9NQ36 999 aa17.67■□□□□ 0.42
TPM1-214ENST00000558544 SERGEFQ9UGK8 458 aa17.67■□□□□ 0.42
TPM1-214ENST00000558544 SNX12Q9UMY4 172 aa17.67■□□□□ 0.42
TPM1-214ENST00000558544 SCML1Q9UN30 329 aa17.67■□□□□ 0.42
TPM1-214ENST00000558544 PCDHGA2Q9Y5H1 932 aa17.67■□□□□ 0.42
TPM1-214ENST00000558544 R4GN57 208 aa17.67■□□□□ 0.42
TPM1-214ENST00000558544 CACNA1HO95180 2353 aa17.67■□□□□ 0.42
TPM1-214ENST00000558544 TNRC6BQ9UPQ9 1833 aaKnown RBP17.67■□□□□ 0.42
TPM1-214ENST00000558544 PLK4O00444 970 aa17.66■□□□□ 0.42
TPM1-214ENST00000558544 FANCGO15287 622 aa17.66■□□□□ 0.42
TPM1-214ENST00000558544 ZNF217O75362 1048 aa17.66■□□□□ 0.42
TPM1-214ENST00000558544 RNASEH2AO75792 299 aaKnown RBP17.66■□□□□ 0.42
TPM1-214ENST00000558544 UGT2B4P06133 528 aa17.66■□□□□ 0.42
TPM1-214ENST00000558544 CR2P20023 1033 aa17.66■□□□□ 0.42
TPM1-214ENST00000558544 PTPN3P26045 913 aa17.66■□□□□ 0.42
TPM1-214ENST00000558544 RBL1P28749 1068 aa17.66■□□□□ 0.42
TPM1-214ENST00000558544 P2RY2P41231 377 aa17.66■□□□□ 0.42
TPM1-214ENST00000558544 CSNK1DP48730 415 aa17.66■□□□□ 0.42
TPM1-214ENST00000558544 PTPN5P54829 565 aa17.66■□□□□ 0.42
TPM1-214ENST00000558544 LONRF2Q1L5Z9 754 aa17.66■□□□□ 0.42
TPM1-214ENST00000558544 DARS2Q6PI48 645 aaKnown RBP17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms