RNA–Protein interactions for RNA: ENST00000558532.1

HERC1-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-203ENST00000558532 TRIM43Q96BQ3 446 aaPredicted RBP3.4□□□□□ -1.87
HERC1-203ENST00000558532 IFT74Q96LB3 600 aa3.4□□□□□ -1.87
HERC1-203ENST00000558532 SYT15Q9BQS2 421 aa3.4□□□□□ -1.87
HERC1-203ENST00000558532 RNF26Q9BY78 433 aaPredicted RBP3.4□□□□□ -1.87
HERC1-203ENST00000558532 IFIH1Q9BYX4 1025 aaKnown RBP3.4□□□□□ -1.87
HERC1-203ENST00000558532 MS4A7Q9GZW8 240 aaPredicted RBP3.4□□□□□ -1.87
HERC1-203ENST00000558532 NSRP1Q9H0G5 558 aaKnown RBP3.4□□□□□ -1.87
HERC1-203ENST00000558532 LRMDAQ9H2I8 198 aa3.4□□□□□ -1.87
HERC1-203ENST00000558532 SUDS3Q9H7L9 328 aaPredicted RBP3.4□□□□□ -1.87
HERC1-203ENST00000558532 TLE6Q9H808 572 aa3.4□□□□□ -1.87
HERC1-203ENST00000558532 MAGEF1Q9HAY2 307 aa3.4□□□□□ -1.87
HERC1-203ENST00000558532 LY9Q9HBG7 655 aa3.4□□□□□ -1.87
HERC1-203ENST00000558532 EPB41L5Q9HCM4 733 aa3.4□□□□□ -1.87
HERC1-203ENST00000558532 EXOC1Q9NV70 894 aa3.4□□□□□ -1.87
HERC1-203ENST00000558532 OBP2AQ9NY56 170 aa3.4□□□□□ -1.87
HERC1-203ENST00000558532 AIPL1Q9NZN9 384 aa3.4□□□□□ -1.87
HERC1-203ENST00000558532 ATXN10Q9UBB4 475 aa3.4□□□□□ -1.87
HERC1-203ENST00000558532 SERGEFQ9UGK8 458 aa3.4□□□□□ -1.87
HERC1-203ENST00000558532 TTC7AQ9ULT0 858 aaPredicted RBP3.4□□□□□ -1.87
HERC1-203ENST00000558532 NENFQ9UMX5 172 aa3.4□□□□□ -1.87
HERC1-203ENST00000558532 SH2B3Q9UQQ2 575 aa3.4□□□□□ -1.87
HERC1-203ENST00000558532 LRCH1Q9Y2L9 728 aa3.4□□□□□ -1.87
HERC1-203ENST00000558532 C2CD2Q9Y426 696 aa3.4□□□□□ -1.87
HERC1-203ENST00000558532 TOGARAM1Q9Y4F4 1720 aa3.4□□□□□ -1.87
HERC1-203ENST00000558532 COL1A1P02452 1464 aaPredicted RBP3.4□□□□□ -1.87
HERC1-203ENST00000558532 TRPM3Q9HCF6 1732 aaPredicted RBP3.39□□□□□ -1.87
HERC1-203ENST00000558532 DUOX1Q9NRD9 1551 aa3.39□□□□□ -1.87
HERC1-203ENST00000558532 RIC1Q4ADV7 1423 aa3.39□□□□□ -1.87
HERC1-203ENST00000558532 MACROD2A1Z1Q3 448 aa3.39□□□□□ -1.87
HERC1-203ENST00000558532 BTBD18B2RXH4 712 aa3.39□□□□□ -1.87
HERC1-203ENST00000558532 BTBD19C9JJ37 291 aa3.39□□□□□ -1.87
HERC1-203ENST00000558532 MASP2O00187 686 aa3.39□□□□□ -1.87
HERC1-203ENST00000558532 ZBTB43O43298 467 aa3.39□□□□□ -1.87
HERC1-203ENST00000558532 CREB3O43889 395 aa3.39□□□□□ -1.87
HERC1-203ENST00000558532 TBC1D4O60343 1298 aa3.39□□□□□ -1.87
HERC1-203ENST00000558532 MOCS3O95396 460 aa3.39□□□□□ -1.87
HERC1-203ENST00000558532 C1RP00736 705 aa3.39□□□□□ -1.87
HERC1-203ENST00000558532 AGTP01019 485 aa3.39□□□□□ -1.87
HERC1-203ENST00000558532 CLTAP09496 248 aa3.39□□□□□ -1.87
HERC1-203ENST00000558532 CCDC166P0CW27 439 aa3.39□□□□□ -1.87
HERC1-203ENST00000558532 IDO1P14902 403 aa3.39□□□□□ -1.87
HERC1-203ENST00000558532 ZNF37AP17032 561 aaPredicted RBP3.39□□□□□ -1.87
HERC1-203ENST00000558532 KCNA3P22001 575 aa3.39□□□□□ -1.87
HERC1-203ENST00000558532 CCNE1P24864 410 aa3.39□□□□□ -1.87
HERC1-203ENST00000558532 ANXA13P27216 316 aa3.39□□□□□ -1.87
HERC1-203ENST00000558532 TMOD1P28289 359 aa3.39□□□□□ -1.87
HERC1-203ENST00000558532 ADORA2AP29274 412 aa3.39□□□□□ -1.87
HERC1-203ENST00000558532 KIF5BP33176 963 aa3.39□□□□□ -1.87
HERC1-203ENST00000558532 ABCD1P33897 745 aa3.39□□□□□ -1.87
HERC1-203ENST00000558532 IL15P40933 162 aaPredicted RBP3.39□□□□□ -1.87
HERC1-203ENST00000558532 PRCPP42785 496 aa3.39□□□□□ -1.87
HERC1-203ENST00000558532 PEX5P50542 639 aa3.39□□□□□ -1.87
HERC1-203ENST00000558532 TUBP50607 506 aa3.39□□□□□ -1.87
HERC1-203ENST00000558532 PDE6CP51160 858 aa3.39□□□□□ -1.87
HERC1-203ENST00000558532 DGKEP52429 567 aa3.39□□□□□ -1.87
HERC1-203ENST00000558532 DRG2P55039 364 aaKnown RBP3.39□□□□□ -1.87
HERC1-203ENST00000558532 SUMO3P55854 103 aaPredicted RBP3.39□□□□□ -1.87
HERC1-203ENST00000558532 SOX10P56693 466 aa3.39□□□□□ -1.87
HERC1-203ENST00000558532 NLRP5P59047 1200 aa3.39□□□□□ -1.87
HERC1-203ENST00000558532 MAGOHP61326 146 aaKnown RBP3.39□□□□□ -1.87
HERC1-203ENST00000558532 PHEXP78562 749 aa3.39□□□□□ -1.87
HERC1-203ENST00000558532 GUCY2DQ02846 1103 aa3.39□□□□□ -1.87
HERC1-203ENST00000558532 KRT17Q04695 432 aa3.39□□□□□ -1.87
HERC1-203ENST00000558532 TMED1Q13445 227 aa3.39□□□□□ -1.87
HERC1-203ENST00000558532 RAB32Q13637 225 aa3.39□□□□□ -1.87
HERC1-203ENST00000558532 TRIM29Q14134 588 aa3.39□□□□□ -1.87
HERC1-203ENST00000558532 E2F2Q14209 437 aa3.39□□□□□ -1.87
HERC1-203ENST00000558532 POLD3Q15054 466 aaPredicted RBP3.39□□□□□ -1.87
HERC1-203ENST00000558532 SPA17Q15506 151 aa3.39□□□□□ -1.87
HERC1-203ENST00000558532 TAF11Q15544 211 aa3.39□□□□□ -1.87
HERC1-203ENST00000558532 NAB2Q15742 525 aa3.39□□□□□ -1.87
HERC1-203ENST00000558532 NPY5RQ15761 445 aa3.39□□□□□ -1.87
HERC1-203ENST00000558532 PROSER3Q2NL68 480 aa3.39□□□□□ -1.87
HERC1-203ENST00000558532 CCDC152Q4G0S7 254 aa3.39□□□□□ -1.87
HERC1-203ENST00000558532 LRRC23Q53EV4 343 aaPredicted RBP3.39□□□□□ -1.87
HERC1-203ENST00000558532 PLA1AQ53H76 456 aa3.39□□□□□ -1.87
HERC1-203ENST00000558532 PLAC9Q5JTB6 97 aa3.39□□□□□ -1.87
HERC1-203ENST00000558532 WASHC2DQ5SRD0 308 aa3.39□□□□□ -1.87
HERC1-203ENST00000558532 RNF220Q5VTB9 566 aa3.39□□□□□ -1.87
HERC1-203ENST00000558532 RRAGBQ5VZM2 374 aa3.39□□□□□ -1.87
HERC1-203ENST00000558532 ARL6IP4Q66PJ3 421 aaKnown RBP3.39□□□□□ -1.87
HERC1-203ENST00000558532 KLHL10Q6JEL2 608 aa3.39□□□□□ -1.87
HERC1-203ENST00000558532 ZDHHC24Q6UX98 284 aa3.39□□□□□ -1.87
HERC1-203ENST00000558532 ZNF788Q6ZQV5 615 aa3.39□□□□□ -1.87
HERC1-203ENST00000558532 CCDC149Q6ZUS6 474 aa3.39□□□□□ -1.87
HERC1-203ENST00000558532 UNC13DQ70J99 1090 aa3.39□□□□□ -1.87
HERC1-203ENST00000558532 CYB5R4Q7L1T6 521 aa3.39□□□□□ -1.87
HERC1-203ENST00000558532 CHST3Q7LGC8 479 aa3.39□□□□□ -1.87
HERC1-203ENST00000558532 CPLX4Q7Z7G2 160 aa3.39□□□□□ -1.87
HERC1-203ENST00000558532 TBC1D1Q86TI0 1168 aaPredicted RBP3.39□□□□□ -1.87
HERC1-203ENST00000558532 HOOK3Q86VS8 718 aa3.39□□□□□ -1.87
HERC1-203ENST00000558532 TBC1D10CQ8IV04 446 aa3.39□□□□□ -1.87
HERC1-203ENST00000558532 FAM114A1Q8IWE2 563 aa3.39□□□□□ -1.87
HERC1-203ENST00000558532 SLC15A3Q8IY34 581 aa3.39□□□□□ -1.87
HERC1-203ENST00000558532 SPICE1Q8N0Z3 855 aa3.39□□□□□ -1.87
HERC1-203ENST00000558532 ARHGAP18Q8N392 663 aa3.39□□□□□ -1.87
HERC1-203ENST00000558532 MPP5Q8N3R9 675 aa3.39□□□□□ -1.87
HERC1-203ENST00000558532 STKLD1Q8NE28 680 aa3.39□□□□□ -1.87
HERC1-203ENST00000558532 MAIP1Q8WWC4 291 aa3.39□□□□□ -1.87
HERC1-203ENST00000558532 LRTOMTQ8WZ04 291 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms