RNA–Protein interactions for RNA: ENST00000557548.1

TRAV28-201, Transcript of T cell receptor alpha variable 28 (pseudogene), humanhuman

BASIC

Gene TRAV28, Length 323 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV28-201ENST00000557548 DNAAF5Q86Y56 855 aa3.3□□□□□ -1.88
TRAV28-201ENST00000557548 TDRPQ86YL5 185 aa3.3□□□□□ -1.88
TRAV28-201ENST00000557548 KLBQ86Z14 1044 aa3.3□□□□□ -1.88
TRAV28-201ENST00000557548 RFX6Q8HWS3 928 aa3.3□□□□□ -1.88
TRAV28-201ENST00000557548 CREBRFQ8IUR6 639 aa3.3□□□□□ -1.88
TRAV28-201ENST00000557548 ARHGEF19Q8IW93 802 aa3.3□□□□□ -1.88
TRAV28-201ENST00000557548 TMEM217Q8N7C4 229 aa3.3□□□□□ -1.88
TRAV28-201ENST00000557548 POMGNT2Q8NAT1 580 aa3.3□□□□□ -1.88
TRAV28-201ENST00000557548 POGLUT1Q8NBL1 392 aa3.3□□□□□ -1.88
TRAV28-201ENST00000557548 SLC16A11Q8NCK7 471 aa3.3□□□□□ -1.88
TRAV28-201ENST00000557548 IL17DQ8TAD2 202 aa3.3□□□□□ -1.88
TRAV28-201ENST00000557548 NEK9Q8TD19 979 aa3.3□□□□□ -1.88
TRAV28-201ENST00000557548 CELF1Q92879 486 aaKnown RBP3.3□□□□□ -1.88
TRAV28-201ENST00000557548 VPS33AQ96AX1 596 aa3.3□□□□□ -1.88
TRAV28-201ENST00000557548 PABPC5Q96DU9 382 aaKnown RBP3.3□□□□□ -1.88
TRAV28-201ENST00000557548 ELMOD3Q96FG2 381 aa3.3□□□□□ -1.88
TRAV28-201ENST00000557548 PGAM5Q96HS1 289 aa3.3□□□□□ -1.88
TRAV28-201ENST00000557548 ZNF347Q96SE7 839 aa3.3□□□□□ -1.88
TRAV28-201ENST00000557548 FRMD8Q9BZ67 464 aaPredicted RBP3.3□□□□□ -1.88
TRAV28-201ENST00000557548 ANKRD2Q9GZV1 360 aa3.3□□□□□ -1.88
TRAV28-201ENST00000557548 DEF6Q9H4E7 631 aa3.3□□□□□ -1.88
TRAV28-201ENST00000557548 ERVMER34-1Q9H9K5 563 aa3.3□□□□□ -1.88
TRAV28-201ENST00000557548 KIF9Q9HAQ2 790 aa3.3□□□□□ -1.88
TRAV28-201ENST00000557548 CD248Q9HCU0 757 aa3.3□□□□□ -1.88
TRAV28-201ENST00000557548 TXNRD2Q9NNW7 524 aa3.3□□□□□ -1.88
TRAV28-201ENST00000557548 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.3□□□□□ -1.88
TRAV28-201ENST00000557548 ATP8A2Q9NTI2 1148 aa3.3□□□□□ -1.88
TRAV28-201ENST00000557548 AURKAIP1Q9NWT8 199 aaPredicted RBP3.3□□□□□ -1.88
TRAV28-201ENST00000557548 ASIC5Q9NY37 505 aa3.3□□□□□ -1.88
TRAV28-201ENST00000557548 DLGAP2Q9P1A6 1054 aa3.3□□□□□ -1.88
TRAV28-201ENST00000557548 SEL1LQ9UBV2 794 aa3.3□□□□□ -1.88
TRAV28-201ENST00000557548 HAO1Q9UJM8 370 aa3.3□□□□□ -1.88
TRAV28-201ENST00000557548 ST3GAL5Q9UNP4 418 aa3.3□□□□□ -1.88
TRAV28-201ENST00000557548 ICKQ9UPZ9 632 aa3.3□□□□□ -1.88
TRAV28-201ENST00000557548 REXO2Q9Y3B8 237 aaKnown RBP3.3□□□□□ -1.88
TRAV28-201ENST00000557548 TRPV2Q9Y5S1 764 aa3.3□□□□□ -1.88
TRAV28-201ENST00000557548 A0A0A0MQY5 61 aa3.29□□□□□ -1.88
TRAV28-201ENST00000557548 hCG_1809904A0A1W2PP81 198 aa3.29□□□□□ -1.88
TRAV28-201ENST00000557548 A0A1W2PPE2 198 aa3.29□□□□□ -1.88
TRAV28-201ENST00000557548 A0A1W2PR64 198 aa3.29□□□□□ -1.88
TRAV28-201ENST00000557548 A0A1W2PRG0 241 aa3.29□□□□□ -1.88
TRAV28-201ENST00000557548 FAM90A8PA6NJQ4 464 aa3.29□□□□□ -1.88
TRAV28-201ENST00000557548 A8MXE2 369 aa3.29□□□□□ -1.88
TRAV28-201ENST00000557548 CDRT15L2A8MXV6 281 aa3.29□□□□□ -1.88
TRAV28-201ENST00000557548 CLGNO14967 610 aa3.29□□□□□ -1.88
TRAV28-201ENST00000557548 DDAH2O95865 285 aa3.29□□□□□ -1.88
TRAV28-201ENST00000557548 TTLL1O95922 423 aa3.29□□□□□ -1.88
TRAV28-201ENST00000557548 MT-CO3P00414 261 aa3.29□□□□□ -1.88
TRAV28-201ENST00000557548 IL1AP01583 271 aa3.29□□□□□ -1.88
TRAV28-201ENST00000557548 PTMAP06454 111 aaKnown RBP3.29□□□□□ -1.88
TRAV28-201ENST00000557548 ENO1P06733 434 aaKnown RBP3.29□□□□□ -1.88
TRAV28-201ENST00000557548 FAM90A13PP0C7W8 464 aa3.29□□□□□ -1.88
TRAV28-201ENST00000557548 FAM90A24PP0C7X0 464 aa3.29□□□□□ -1.88
TRAV28-201ENST00000557548 IRF1P10914 325 aa3.29□□□□□ -1.88
TRAV28-201ENST00000557548 IL7RP16871 459 aa3.29□□□□□ -1.88
TRAV28-201ENST00000557548 ATF7P17544 494 aaPredicted RBP3.29□□□□□ -1.88
TRAV28-201ENST00000557548 TNFRSF1AP19438 455 aa3.29□□□□□ -1.88
TRAV28-201ENST00000557548 TBXAS1P24557 533 aaPredicted RBP3.29□□□□□ -1.88
TRAV28-201ENST00000557548 EEF1DP29692 281 aaKnown RBP3.29□□□□□ -1.88
TRAV28-201ENST00000557548 IDUAP35475 653 aa3.29□□□□□ -1.88
TRAV28-201ENST00000557548 THPOP40225 353 aa3.29□□□□□ -1.88
TRAV28-201ENST00000557548 SELENOPP49908 381 aa3.29□□□□□ -1.88
TRAV28-201ENST00000557548 CAMPP49913 170 aa3.29□□□□□ -1.88
TRAV28-201ENST00000557548 PMS2P54278 862 aa3.29□□□□□ -1.88
TRAV28-201ENST00000557548 ARSFP54793 590 aa3.29□□□□□ -1.88
TRAV28-201ENST00000557548 HDAC4P56524 1084 aa3.29□□□□□ -1.88
TRAV28-201ENST00000557548 CYP4F2P78329 520 aa3.29□□□□□ -1.88
TRAV28-201ENST00000557548 FGFBP1Q14512 234 aa3.29□□□□□ -1.88
TRAV28-201ENST00000557548 COG2Q14746 738 aa3.29□□□□□ -1.88
TRAV28-201ENST00000557548 PRKD1Q15139 912 aaPredicted RBP3.29□□□□□ -1.88
TRAV28-201ENST00000557548 CDC37Q16543 378 aaPredicted RBP3.29□□□□□ -1.88
TRAV28-201ENST00000557548 COL28A1Q2UY09 1125 aa3.29□□□□□ -1.88
TRAV28-201ENST00000557548 ZSCAN23Q3MJ62 389 aa3.29□□□□□ -1.88
TRAV28-201ENST00000557548 AWAT1Q58HT5 328 aa3.29□□□□□ -1.88
TRAV28-201ENST00000557548 CC2D1BQ5T0F9 858 aaKnown RBP3.29□□□□□ -1.88
TRAV28-201ENST00000557548 LRCH2Q5VUJ6 765 aa3.29□□□□□ -1.88
TRAV28-201ENST00000557548 KIAA0895LQ68EN5 471 aa3.29□□□□□ -1.88
TRAV28-201ENST00000557548 KRTAP5-11Q6L8G4 156 aa3.29□□□□□ -1.88
TRAV28-201ENST00000557548 TMEM65Q6PI78 240 aa3.29□□□□□ -1.88
TRAV28-201ENST00000557548 MFSD6Q6ZSS7 791 aa3.29□□□□□ -1.88
TRAV28-201ENST00000557548 GSTA5Q7RTV2 222 aa3.29□□□□□ -1.88
TRAV28-201ENST00000557548 ADGRA1Q86SQ6 560 aa3.29□□□□□ -1.88
TRAV28-201ENST00000557548 KBTBD6Q86V97 674 aa3.29□□□□□ -1.88
TRAV28-201ENST00000557548 IQCA1Q86XH1 822 aa3.29□□□□□ -1.88
TRAV28-201ENST00000557548 RHPN2Q8IUC4 686 aa3.29□□□□□ -1.88
TRAV28-201ENST00000557548 DHX40Q8IX18 779 aaKnown RBP3.29□□□□□ -1.88
TRAV28-201ENST00000557548 THNSL1Q8IYQ7 743 aa3.29□□□□□ -1.88
TRAV28-201ENST00000557548 SLC44A3Q8N4M1 653 aa3.29□□□□□ -1.88
TRAV28-201ENST00000557548 AMER2Q8N7J2 671 aa3.29□□□□□ -1.88
TRAV28-201ENST00000557548 TERB1Q8NA31 727 aa3.29□□□□□ -1.88
TRAV28-201ENST00000557548 APPL2Q8NEU8 664 aa3.29□□□□□ -1.88
TRAV28-201ENST00000557548 OR6J1Q8NGC5 347 aa3.29□□□□□ -1.88
TRAV28-201ENST00000557548 GOT1L1Q8NHS2 421 aaPredicted RBP3.29□□□□□ -1.88
TRAV28-201ENST00000557548 HIC2Q96JB3 615 aa3.29□□□□□ -1.88
TRAV28-201ENST00000557548 BBS4Q96RK4 519 aa3.29□□□□□ -1.88
TRAV28-201ENST00000557548 GPATCH1Q9BRR8 931 aaKnown RBP3.29□□□□□ -1.88
TRAV28-201ENST00000557548 DESI2Q9BSY9 194 aa3.29□□□□□ -1.88
TRAV28-201ENST00000557548 H2AFJQ9BTM1 129 aa3.29□□□□□ -1.88
TRAV28-201ENST00000557548 IFT27Q9BW83 186 aa3.29□□□□□ -1.88
TRAV28-201ENST00000557548 XRN2Q9H0D6 950 aaKnown RBP eCLIP3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 223.7 ms