RNA–Protein interactions for RNA: ENST00000557424.1

HMGB1P14-201, Transcript of high mobility group box 1 pseudogene 14, humanhuman

BASIC

Gene HMGB1P14, Length 591 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P14-201ENST00000557424 EIF3CQ99613 913 aaKnown RBP3.32□□□□□ -1.88
HMGB1P14-201ENST00000557424 C17orf80Q9BSJ5 609 aa3.32□□□□□ -1.88
HMGB1P14-201ENST00000557424 THUMPD3Q9BV44 507 aaKnown RBP3.32□□□□□ -1.88
HMGB1P14-201ENST00000557424 HDHD5Q9BXW7 423 aa3.32□□□□□ -1.88
HMGB1P14-201ENST00000557424 TMPRSS5Q9H3S3 457 aa3.32□□□□□ -1.88
HMGB1P14-201ENST00000557424 PPP1R14DQ9NXH3 145 aa3.32□□□□□ -1.88
HMGB1P14-201ENST00000557424 CPSF2Q9P2I0 782 aaKnown RBP3.32□□□□□ -1.88
HMGB1P14-201ENST00000557424 AMFRQ9UKV5 643 aa3.32□□□□□ -1.88
HMGB1P14-201ENST00000557424 INTS6Q9UL03 887 aaKnown RBP3.32□□□□□ -1.88
HMGB1P14-201ENST00000557424 BLOC1S6Q9UL45 172 aa3.32□□□□□ -1.88
HMGB1P14-201ENST00000557424 NENFQ9UMX5 172 aa3.32□□□□□ -1.88
HMGB1P14-201ENST00000557424 PCDHB2Q9Y5E7 798 aa3.32□□□□□ -1.88
HMGB1P14-201ENST00000557424 ADGRF5Q8IZF2 1346 aa3.31□□□□□ -1.88
HMGB1P14-201ENST00000557424 ADGRA2Q96PE1 1338 aa3.31□□□□□ -1.88
HMGB1P14-201ENST00000557424 TBC1D3DA0A087WVF3 549 aa3.31□□□□□ -1.88
HMGB1P14-201ENST00000557424 TBC1D3IA0A087WXS9 549 aa3.31□□□□□ -1.88
HMGB1P14-201ENST00000557424 TBC1D3EA0A087X179 549 aa3.31□□□□□ -1.88
HMGB1P14-201ENST00000557424 TBC1D3KA0A087X1G2 549 aa3.31□□□□□ -1.88
HMGB1P14-201ENST00000557424 CCDC187A0A096LP49 1063 aa3.31□□□□□ -1.88
HMGB1P14-201ENST00000557424 A1L4Q6 167 aa3.31□□□□□ -1.88
HMGB1P14-201ENST00000557424 OR2A25A4D2G3 310 aa3.31□□□□□ -1.88
HMGB1P14-201ENST00000557424 TBC1D3BA6NDS4 549 aa3.31□□□□□ -1.88
HMGB1P14-201ENST00000557424 TBC1D3FA6NER0 549 aaPredicted RBP3.31□□□□□ -1.88
HMGB1P14-201ENST00000557424 MBD3L5A6NJ08 208 aaPredicted RBP3.31□□□□□ -1.88
HMGB1P14-201ENST00000557424 NPIPB13A6NJU9 1138 aa3.31□□□□□ -1.88
HMGB1P14-201ENST00000557424 NPIPB5A8MRT5 1133 aa3.31□□□□□ -1.88
HMGB1P14-201ENST00000557424 A8MZ25 164 aa3.31□□□□□ -1.88
HMGB1P14-201ENST00000557424 TBC1D3LB9A6J9 549 aa3.31□□□□□ -1.88
HMGB1P14-201ENST00000557424 NPIPB4C9JG80 1138 aa3.31□□□□□ -1.88
HMGB1P14-201ENST00000557424 SCAMP1O15126 338 aa3.31□□□□□ -1.88
HMGB1P14-201ENST00000557424 ADAMDEC1O15204 470 aa3.31□□□□□ -1.88
HMGB1P14-201ENST00000557424 BCAT2O15382 392 aaPredicted RBP3.31□□□□□ -1.88
HMGB1P14-201ENST00000557424 CA12O43570 354 aa3.31□□□□□ -1.88
HMGB1P14-201ENST00000557424 SYNCRIPO60506 623 aaKnown RBP3.31□□□□□ -1.88
HMGB1P14-201ENST00000557424 KINO60870 393 aaKnown RBP3.31□□□□□ -1.88
HMGB1P14-201ENST00000557424 TADA2AO75478 443 aa3.31□□□□□ -1.88
HMGB1P14-201ENST00000557424 SEC14L2O76054 403 aa3.31□□□□□ -1.88
HMGB1P14-201ENST00000557424 JTBO76095 146 aa3.31□□□□□ -1.88
HMGB1P14-201ENST00000557424 CSPG5O95196 566 aa3.31□□□□□ -1.88
HMGB1P14-201ENST00000557424 KAT7O95251 611 aa3.31□□□□□ -1.88
HMGB1P14-201ENST00000557424 RB1P06400 928 aa3.31□□□□□ -1.88
HMGB1P14-201ENST00000557424 TPOP07202 933 aa3.31□□□□□ -1.88
HMGB1P14-201ENST00000557424 SNRNP70P08621 437 aaKnown RBP3.31□□□□□ -1.88
HMGB1P14-201ENST00000557424 TBC1D3HP0C7X1 549 aa3.31□□□□□ -1.88
HMGB1P14-201ENST00000557424 NR2F6P10588 404 aa3.31□□□□□ -1.88
HMGB1P14-201ENST00000557424 ZNF37AP17032 561 aaPredicted RBP3.31□□□□□ -1.88
HMGB1P14-201ENST00000557424 MMP8P22894 467 aa3.31□□□□□ -1.88
HMGB1P14-201ENST00000557424 TNFRSF8P28908 595 aa3.31□□□□□ -1.88
HMGB1P14-201ENST00000557424 MC5RP33032 325 aa3.31□□□□□ -1.88
HMGB1P14-201ENST00000557424 HNF1BP35680 557 aa3.31□□□□□ -1.88
HMGB1P14-201ENST00000557424 SLC15A1P46059 708 aa3.31□□□□□ -1.88
HMGB1P14-201ENST00000557424 TDO2P48775 406 aa3.31□□□□□ -1.88
HMGB1P14-201ENST00000557424 RARRES1P49788 294 aa3.31□□□□□ -1.88
HMGB1P14-201ENST00000557424 NPY4RP50391 375 aa3.31□□□□□ -1.88
HMGB1P14-201ENST00000557424 MRPL12P52815 198 aaKnown RBP3.31□□□□□ -1.88
HMGB1P14-201ENST00000557424 MVDP53602 400 aa3.31□□□□□ -1.88
HMGB1P14-201ENST00000557424 RRP1P56182 461 aaKnown RBP3.31□□□□□ -1.88
HMGB1P14-201ENST00000557424 TAS2R50P59544 299 aa3.31□□□□□ -1.88
HMGB1P14-201ENST00000557424 EFNB1P98172 346 aa3.31□□□□□ -1.88
HMGB1P14-201ENST00000557424 TIAL1Q01085 375 aaKnown RBP eCLIP3.31□□□□□ -1.88
HMGB1P14-201ENST00000557424 CDK18Q07002 472 aa3.31□□□□□ -1.88
HMGB1P14-201ENST00000557424 EIF2B5Q13144 721 aaKnown RBP3.31□□□□□ -1.88
HMGB1P14-201ENST00000557424 SLC14A1Q13336 389 aa3.31□□□□□ -1.88
HMGB1P14-201ENST00000557424 ASTE1Q2TB18 679 aaPredicted RBP3.31□□□□□ -1.88
HMGB1P14-201ENST00000557424 AP5B1Q2VPB7 878 aa3.31□□□□□ -1.88
HMGB1P14-201ENST00000557424 TBRG1Q3YBR2 411 aa3.31□□□□□ -1.88
HMGB1P14-201ENST00000557424 AASDHQ4L235 1098 aaPredicted RBP3.31□□□□□ -1.88
HMGB1P14-201ENST00000557424 GLE1Q53GS7 698 aaKnown RBP3.31□□□□□ -1.88
HMGB1P14-201ENST00000557424 RUNDC3AQ59EK9 446 aa3.31□□□□□ -1.88
HMGB1P14-201ENST00000557424 TCP11X2Q5H9J9 407 aa3.31□□□□□ -1.88
HMGB1P14-201ENST00000557424 CCDC158Q5M9N0 1113 aa3.31□□□□□ -1.88
HMGB1P14-201ENST00000557424 TREML2Q5T2D2 321 aa3.31□□□□□ -1.88
HMGB1P14-201ENST00000557424 MEX3CQ5U5Q3 659 aaKnown RBP3.31□□□□□ -1.88
HMGB1P14-201ENST00000557424 SLC9A4Q6AI14 798 aa3.31□□□□□ -1.88
HMGB1P14-201ENST00000557424 TBC1D3GQ6DHY5 549 aa3.31□□□□□ -1.88
HMGB1P14-201ENST00000557424 TBC1D3CQ6IPX1 549 aa3.31□□□□□ -1.88
HMGB1P14-201ENST00000557424 SLC30A9Q6PML9 568 aa3.31□□□□□ -1.88
HMGB1P14-201ENST00000557424 RNF144BQ7Z419 303 aa3.31□□□□□ -1.88
HMGB1P14-201ENST00000557424 PEG10Q86TG7 708 aaKnown RBP3.31□□□□□ -1.88
HMGB1P14-201ENST00000557424 CAND1Q86VP6 1230 aaKnown RBP3.31□□□□□ -1.88
HMGB1P14-201ENST00000557424 TBC1D3Q8IZP1 549 aaPredicted RBP3.31□□□□□ -1.88
HMGB1P14-201ENST00000557424 TEX9Q8N6V9 391 aa3.31□□□□□ -1.88
HMGB1P14-201ENST00000557424 CADM4Q8NFZ8 388 aa3.31□□□□□ -1.88
HMGB1P14-201ENST00000557424 UTP15Q8TED0 518 aaKnown RBP3.31□□□□□ -1.88
HMGB1P14-201ENST00000557424 DEPDC1BQ8WUY9 529 aa3.31□□□□□ -1.88
HMGB1P14-201ENST00000557424 TFAP2BQ92481 460 aa3.31□□□□□ -1.88
HMGB1P14-201ENST00000557424 GLG1Q92896 1179 aa3.31□□□□□ -1.88
HMGB1P14-201ENST00000557424 EXOC4Q96A65 974 aa3.31□□□□□ -1.88
HMGB1P14-201ENST00000557424 CENPTQ96BT3 561 aa3.31□□□□□ -1.88
HMGB1P14-201ENST00000557424 SARAFQ96BY9 339 aa3.31□□□□□ -1.88
HMGB1P14-201ENST00000557424 DAZAP1Q96EP5 407 aaKnown RBP3.31□□□□□ -1.88
HMGB1P14-201ENST00000557424 SAAL1Q96ER3 474 aa3.31□□□□□ -1.88
HMGB1P14-201ENST00000557424 WDYHV1Q96HA8 205 aa3.31□□□□□ -1.88
HMGB1P14-201ENST00000557424 PDLIM2Q96JY6 352 aa3.31□□□□□ -1.88
HMGB1P14-201ENST00000557424 LINC00615Q96LM1 132 aaPredicted RBP3.31□□□□□ -1.88
HMGB1P14-201ENST00000557424 C1orf74Q96LT6 269 aa3.31□□□□□ -1.88
HMGB1P14-201ENST00000557424 TIMP4Q99727 224 aa3.31□□□□□ -1.88
HMGB1P14-201ENST00000557424 NAA11Q9BSU3 229 aaPredicted RBP3.31□□□□□ -1.88
HMGB1P14-201ENST00000557424 MRIQ9BWK5 157 aa3.31□□□□□ -1.88
HMGB1P14-201ENST00000557424 RNF26Q9BY78 433 aaPredicted RBP3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms