RNA–Protein interactions for RNA: ENST00000557358.1

VPS33B-206, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-206ENST00000557358 BTBD6Q96KE9 485 aa14.04□□□□□ -0.16
VPS33B-206ENST00000557358 TM9SF3Q9HD45 589 aa14.04□□□□□ -0.16
VPS33B-206ENST00000557358 CWC15Q9P013 229 aaKnown RBP14.04□□□□□ -0.16
VPS33B-206ENST00000557358 RCOR3Q9P2K3 495 aaPredicted RBP14.04□□□□□ -0.16
VPS33B-206ENST00000557358 INTUQ9ULD6 942 aa14.04□□□□□ -0.16
VPS33B-206ENST00000557358 PCDHB9Q9Y5E1 797 aa14.04□□□□□ -0.16
VPS33B-206ENST00000557358 DMXL1Q9Y485 3027 aa14.04□□□□□ -0.16
VPS33B-206ENST00000557358 KNL1Q8NG31 2342 aa14.04□□□□□ -0.16
VPS33B-206ENST00000557358 ADAMTS9Q9P2N4 1935 aa14.03□□□□□ -0.16
VPS33B-206ENST00000557358 ASCC3Q8N3C0 2202 aaKnown RBP14.03□□□□□ -0.16
VPS33B-206ENST00000557358 CDX4O14627 284 aaPredicted RBP14.03□□□□□ -0.16
VPS33B-206ENST00000557358 PRAMEF11O60813 436 aa14.03□□□□□ -0.16
VPS33B-206ENST00000557358 RNGTTO60942 597 aaKnown RBP14.03□□□□□ -0.16
VPS33B-206ENST00000557358 IGHV4-34P06331 123 aa14.03□□□□□ -0.16
VPS33B-206ENST00000557358 CTSLP07711 333 aa14.03□□□□□ -0.16
VPS33B-206ENST00000557358 MAN1A1P33908 653 aa14.03□□□□□ -0.16
VPS33B-206ENST00000557358 GJC1P36383 396 aa14.03□□□□□ -0.16
VPS33B-206ENST00000557358 CSNK1EP49674 416 aaKnown RBP14.03□□□□□ -0.16
VPS33B-206ENST00000557358 PAPOLAP51003 745 aaKnown RBP14.03□□□□□ -0.16
VPS33B-206ENST00000557358 NOVA1P51513 510 aaKnown RBP14.03□□□□□ -0.16
VPS33B-206ENST00000557358 RENBPP51606 427 aa14.03□□□□□ -0.16
VPS33B-206ENST00000557358 STAT4Q14765 748 aa14.03□□□□□ -0.16
VPS33B-206ENST00000557358 PDK2Q15119 407 aa14.03□□□□□ -0.16
VPS33B-206ENST00000557358 INAVAQ3KP66 663 aa14.03□□□□□ -0.16
VPS33B-206ENST00000557358 ZNF805Q5CZA5 627 aa14.03□□□□□ -0.16
VPS33B-206ENST00000557358 ARTNQ5T4W7 220 aa14.03□□□□□ -0.16
VPS33B-206ENST00000557358 AGBL4Q5VU57 503 aa14.03□□□□□ -0.16
VPS33B-206ENST00000557358 LEKR1Q6ZMV7 388 aa14.03□□□□□ -0.16
VPS33B-206ENST00000557358 CCDC170Q8IYT3 715 aa14.03□□□□□ -0.16
VPS33B-206ENST00000557358 CHP1Q99653 195 aa14.03□□□□□ -0.16
VPS33B-206ENST00000557358 CINPQ9BW66 212 aaPredicted RBP14.03□□□□□ -0.16
VPS33B-206ENST00000557358 GAREM1Q9H706 876 aa14.03□□□□□ -0.16
VPS33B-206ENST00000557358 LRRC19Q9H756 370 aa14.03□□□□□ -0.16
VPS33B-206ENST00000557358 SPTLC3Q9NUV7 552 aa14.03□□□□□ -0.16
VPS33B-206ENST00000557358 DNAAF2Q9NVR5 837 aaKnown RBP14.03□□□□□ -0.16
VPS33B-206ENST00000557358 ANKRD6Q9Y2G4 727 aa14.03□□□□□ -0.16
VPS33B-206ENST00000557358 WASF2Q9Y6W5 498 aa14.03□□□□□ -0.16
VPS33B-206ENST00000557358 A0A1B0GVT2 93 aa14.02□□□□□ -0.17
VPS33B-206ENST00000557358 TMEM110-MUSTN1A8MSY1 372 aa14.02□□□□□ -0.17
VPS33B-206ENST00000557358 PRAMEF26H0Y7S4 382 aa14.02□□□□□ -0.17
VPS33B-206ENST00000557358 PLK4O00444 970 aa14.02□□□□□ -0.17
VPS33B-206ENST00000557358 VILLO15195 856 aa14.02□□□□□ -0.17
VPS33B-206ENST00000557358 NEBLO76041 1014 aa14.02□□□□□ -0.17
VPS33B-206ENST00000557358 UGT2B4P06133 528 aa14.02□□□□□ -0.17
VPS33B-206ENST00000557358 ADRB3P13945 408 aa14.02□□□□□ -0.17
VPS33B-206ENST00000557358 CSRP1P21291 193 aaKnown RBP14.02□□□□□ -0.17
VPS33B-206ENST00000557358 NFKBIAP25963 317 aa14.02□□□□□ -0.17
VPS33B-206ENST00000557358 CD38P28907 300 aa14.02□□□□□ -0.17
VPS33B-206ENST00000557358 MAT2AP31153 395 aaKnown RBP14.02□□□□□ -0.17
VPS33B-206ENST00000557358 AKT2P31751 481 aa14.02□□□□□ -0.17
VPS33B-206ENST00000557358 RPS21P63220 83 aaKnown RBP14.02□□□□□ -0.17
VPS33B-206ENST00000557358 IL10RBQ08334 325 aa14.02□□□□□ -0.17
VPS33B-206ENST00000557358 OVGP1Q12889 678 aa14.02□□□□□ -0.17
VPS33B-206ENST00000557358 TBX2Q13207 712 aaPredicted RBP14.02□□□□□ -0.17
VPS33B-206ENST00000557358 SGCGQ13326 291 aa14.02□□□□□ -0.17
VPS33B-206ENST00000557358 DPYSQ14117 519 aa14.02□□□□□ -0.17
VPS33B-206ENST00000557358 MESDQ14696 234 aa14.02□□□□□ -0.17
VPS33B-206ENST00000557358 ASTE1Q2TB18 679 aaPredicted RBP14.02□□□□□ -0.17
VPS33B-206ENST00000557358 NAPEPLDQ6IQ20 393 aa14.02□□□□□ -0.17
VPS33B-206ENST00000557358 KIAA1161Q6NSJ0 714 aa14.02□□□□□ -0.17
VPS33B-206ENST00000557358 GDPD4Q6W3E5 623 aa14.02□□□□□ -0.17
VPS33B-206ENST00000557358 POLNQ7Z5Q5 900 aa14.02□□□□□ -0.17
VPS33B-206ENST00000557358 HORMAD1Q86X24 394 aa14.02□□□□□ -0.17
VPS33B-206ENST00000557358 LRRC49Q8IUZ0 686 aa14.02□□□□□ -0.17
VPS33B-206ENST00000557358 OXR1Q8N573 874 aa14.02□□□□□ -0.17
VPS33B-206ENST00000557358 ATPAF2Q8N5M1 289 aa14.02□□□□□ -0.17
VPS33B-206ENST00000557358 OR6K2Q8NGY2 324 aa14.02□□□□□ -0.17
VPS33B-206ENST00000557358 SLC35G2Q8TBE7 412 aa14.02□□□□□ -0.17
VPS33B-206ENST00000557358 FAM174AQ8TBP5 190 aa14.02□□□□□ -0.17
VPS33B-206ENST00000557358 RFFLQ8WZ73 363 aa14.02□□□□□ -0.17
VPS33B-206ENST00000557358 FAM131CQ96AQ9 280 aa14.02□□□□□ -0.17
VPS33B-206ENST00000557358 ARRDC3Q96B67 414 aa14.02□□□□□ -0.17
VPS33B-206ENST00000557358 CSPG4P5Q96PW8 444 aa14.02□□□□□ -0.17
VPS33B-206ENST00000557358 CALN1Q9BXU9 219 aa14.02□□□□□ -0.17
VPS33B-206ENST00000557358 SLC39A8Q9C0K1 460 aa14.02□□□□□ -0.17
VPS33B-206ENST00000557358 NOL6Q9H6R4 1146 aaKnown RBP14.02□□□□□ -0.17
VPS33B-206ENST00000557358 FSCN3Q9NQT6 498 aa14.02□□□□□ -0.17
VPS33B-206ENST00000557358 SEPT3Q9UH03 358 aa14.02□□□□□ -0.17
VPS33B-206ENST00000557358 IPO11Q9UI26 975 aaKnown RBP14.02□□□□□ -0.17
VPS33B-206ENST00000557358 NENFQ9UMX5 172 aa14.02□□□□□ -0.17
VPS33B-206ENST00000557358 TRPM6Q9BX84 2022 aa14.02□□□□□ -0.17
VPS33B-206ENST00000557358 CABIN1Q9Y6J0 2220 aa14.01□□□□□ -0.17
VPS33B-206ENST00000557358 UPK3BL1B0FP48 263 aa14.01□□□□□ -0.17
VPS33B-206ENST00000557358 UPK3BL2E5RIL1 263 aa14.01□□□□□ -0.17
VPS33B-206ENST00000557358 YKT6O15498 198 aa14.01□□□□□ -0.17
VPS33B-206ENST00000557358 LATO43561 262 aa14.01□□□□□ -0.17
VPS33B-206ENST00000557358 TSPAN6O43657 245 aa14.01□□□□□ -0.17
VPS33B-206ENST00000557358 AP1G1O43747 822 aa14.01□□□□□ -0.17
VPS33B-206ENST00000557358 ZNF821O75541 412 aaPredicted RBP14.01□□□□□ -0.17
VPS33B-206ENST00000557358 CD160O95971 181 aa14.01□□□□□ -0.17
VPS33B-206ENST00000557358 ZNF883P0CG24 379 aa14.01□□□□□ -0.17
VPS33B-206ENST00000557358 CEACAM1P13688 526 aa14.01□□□□□ -0.17
VPS33B-206ENST00000557358 AMPD1P23109 780 aa14.01□□□□□ -0.17
VPS33B-206ENST00000557358 IL1R2P27930 398 aa14.01□□□□□ -0.17
VPS33B-206ENST00000557358 HSPA9P38646 679 aaKnown RBP14.01□□□□□ -0.17
VPS33B-206ENST00000557358 SLC1A1P43005 524 aa14.01□□□□□ -0.17
VPS33B-206ENST00000557358 MAGEA1P43355 309 aa14.01□□□□□ -0.17
VPS33B-206ENST00000557358 NOP2P46087 812 aaKnown RBP14.01□□□□□ -0.17
VPS33B-206ENST00000557358 ARRB1P49407 418 aaPredicted RBP14.01□□□□□ -0.17
VPS33B-206ENST00000557358 CCT8P50990 548 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms