RNA–Protein interactions for RNA: ENST00000557265.5

SNX6-209, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-209ENST00000557265 LRRC31Q6UY01 552 aa12.53□□□□□ -0.4
SNX6-209ENST00000557265 PARS2Q7L3T8 475 aaKnown RBP12.53□□□□□ -0.4
SNX6-209ENST00000557265 ENOSF1Q7L5Y1 443 aa12.53□□□□□ -0.4
SNX6-209ENST00000557265 SLC26A9Q7LBE3 791 aa12.53□□□□□ -0.4
SNX6-209ENST00000557265 SLC35F3Q8IY50 421 aa12.53□□□□□ -0.4
SNX6-209ENST00000557265 RBFAQ8N0V3 343 aa12.53□□□□□ -0.4
SNX6-209ENST00000557265 BTN2A2Q8WVV5 523 aa12.53□□□□□ -0.4
SNX6-209ENST00000557265 NELFBQ8WX92 580 aa12.53□□□□□ -0.4
SNX6-209ENST00000557265 GLMNQ92990 594 aa12.53□□□□□ -0.4
SNX6-209ENST00000557265 CCDC3Q9BQI4 270 aa12.53□□□□□ -0.4
SNX6-209ENST00000557265 CRACR2AQ9BSW2 395 aa12.53□□□□□ -0.4
SNX6-209ENST00000557265 FAM117AQ9C073 453 aa12.53□□□□□ -0.4
SNX6-209ENST00000557265 CEP44Q9C0F1 390 aa12.53□□□□□ -0.4
SNX6-209ENST00000557265 SYNDIG1Q9H7V2 258 aa12.53□□□□□ -0.4
SNX6-209ENST00000557265 TMPRSS4Q9NRS4 437 aa12.53□□□□□ -0.4
SNX6-209ENST00000557265 APOBEC3BQ9UH17 382 aaKnown RBP12.53□□□□□ -0.4
SNX6-209ENST00000557265 MAN1B1Q9UKM7 699 aa12.53□□□□□ -0.4
SNX6-209ENST00000557265 HEMK1Q9Y5R4 338 aaPredicted RBP12.53□□□□□ -0.4
SNX6-209ENST00000557265 ILVBLA1L0T0 632 aa12.52□□□□□ -0.41
SNX6-209ENST00000557265 GOLGA6L4A6NEF3 574 aa12.52□□□□□ -0.41
SNX6-209ENST00000557265 PPP1R3GB7ZBB8 358 aa12.52□□□□□ -0.41
SNX6-209ENST00000557265 NEMP1O14524 444 aa12.52□□□□□ -0.41
SNX6-209ENST00000557265 TSPAN6O43657 245 aa12.52□□□□□ -0.41
SNX6-209ENST00000557265 SRGAP2O75044 1071 aa12.52□□□□□ -0.41
SNX6-209ENST00000557265 ZMPSTE24O75844 475 aa12.52□□□□□ -0.41
SNX6-209ENST00000557265 GNA14O95837 355 aa12.52□□□□□ -0.41
SNX6-209ENST00000557265 ANXA6P08133 673 aa12.52□□□□□ -0.41
SNX6-209ENST00000557265 ITGA2BP08514 1039 aa12.52□□□□□ -0.41
SNX6-209ENST00000557265 PPP1R2P41236 205 aa12.52□□□□□ -0.41
SNX6-209ENST00000557265 SERPINH1P50454 418 aaKnown RBP12.52□□□□□ -0.41
SNX6-209ENST00000557265 CCNHP51946 323 aaPredicted RBP12.52□□□□□ -0.41
SNX6-209ENST00000557265 RNASE9P60153 205 aaKnown RBP12.52□□□□□ -0.41
SNX6-209ENST00000557265 SLC20A2Q08357 652 aa12.52□□□□□ -0.41
SNX6-209ENST00000557265 SPIDRQ14159 915 aa12.52□□□□□ -0.41
SNX6-209ENST00000557265 RETSATQ6NUM9 610 aa12.52□□□□□ -0.41
SNX6-209ENST00000557265 ZSCAN30Q86W11 494 aa12.52□□□□□ -0.41
SNX6-209ENST00000557265 PCDH20Q8N6Y1 951 aaKnown RBP12.52□□□□□ -0.41
SNX6-209ENST00000557265 C1orf131Q8NDD1 294 aaKnown RBP12.52□□□□□ -0.41
SNX6-209ENST00000557265 ZNF397Q8NF99 534 aaPredicted RBP12.52□□□□□ -0.41
SNX6-209ENST00000557265 WDR48Q8TAF3 677 aa12.52□□□□□ -0.41
SNX6-209ENST00000557265 NAT6Q93015 286 aa12.52□□□□□ -0.41
SNX6-209ENST00000557265 C1orf74Q96LT6 269 aa12.52□□□□□ -0.41
SNX6-209ENST00000557265 NPY6RQ99463 290 aa12.52□□□□□ -0.41
SNX6-209ENST00000557265 TRIM4Q9C037 500 aa12.52□□□□□ -0.41
SNX6-209ENST00000557265 ZDHHC6Q9H6R6 413 aa12.52□□□□□ -0.41
SNX6-209ENST00000557265 SYNCQ9H7C4 482 aa12.52□□□□□ -0.41
SNX6-209ENST00000557265 ATP13A1Q9HD20 1204 aa12.52□□□□□ -0.41
SNX6-209ENST00000557265 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.52□□□□□ -0.41
SNX6-209ENST00000557265 HECAQ9UBI9 543 aaPredicted RBP12.52□□□□□ -0.41
SNX6-209ENST00000557265 IL17BQ9UHF5 180 aa12.52□□□□□ -0.41
SNX6-209ENST00000557265 GGT7Q9UJ14 662 aa12.52□□□□□ -0.41
SNX6-209ENST00000557265 HOOK1Q9UJC3 728 aaKnown RBP12.52□□□□□ -0.41
SNX6-209ENST00000557265 ATXN7L1Q9ULK2 861 aaPredicted RBP12.52□□□□□ -0.41
SNX6-209ENST00000557265 PADI4Q9UM07 663 aa12.52□□□□□ -0.41
SNX6-209ENST00000557265 ITM2BQ9Y287 266 aa12.52□□□□□ -0.41
SNX6-209ENST00000557265 FCF1Q9Y324 198 aaKnown RBP12.52□□□□□ -0.41
SNX6-209ENST00000557265 ACTL7AQ9Y615 435 aa12.52□□□□□ -0.41
SNX6-209ENST00000557265 IGLV3-10A0A075B6K4 115 aa12.51□□□□□ -0.41
SNX6-209ENST00000557265 BICDL2A1A5D9 508 aa12.51□□□□□ -0.41
SNX6-209ENST00000557265 C16orf96A6NNT2 1141 aa12.51□□□□□ -0.41
SNX6-209ENST00000557265 LMO7DNF2Z398 122 aa12.51□□□□□ -0.41
SNX6-209ENST00000557265 YY2O15391 372 aa12.51□□□□□ -0.41
SNX6-209ENST00000557265 GJB6O95452 261 aa12.51□□□□□ -0.41
SNX6-209ENST00000557265 F9P00740 461 aa12.51□□□□□ -0.41
SNX6-209ENST00000557265 BMP6P22004 513 aa12.51□□□□□ -0.41
SNX6-209ENST00000557265 GKP32189 559 aa12.51□□□□□ -0.41
SNX6-209ENST00000557265 ABL2P42684 1182 aa12.51□□□□□ -0.41
SNX6-209ENST00000557265 SULT1E1P49888 294 aa12.51□□□□□ -0.41
SNX6-209ENST00000557265 THOP1P52888 689 aa12.51□□□□□ -0.41
SNX6-209ENST00000557265 MARSP56192 900 aaKnown RBP12.51□□□□□ -0.41
SNX6-209ENST00000557265 STX17P56962 302 aa12.51□□□□□ -0.41
SNX6-209ENST00000557265 SNX16P57768 344 aa12.51□□□□□ -0.41
SNX6-209ENST00000557265 APBA1Q02410 837 aa12.51□□□□□ -0.41
SNX6-209ENST00000557265 DEUP1Q05D60 604 aa12.51□□□□□ -0.41
SNX6-209ENST00000557265 PTK2BQ14289 1009 aa12.51□□□□□ -0.41
SNX6-209ENST00000557265 LINC00303Q3SY05 128 aa12.51□□□□□ -0.41
SNX6-209ENST00000557265 PTPN20Q4JDL3 420 aa12.51□□□□□ -0.41
SNX6-209ENST00000557265 C6orf132Q5T0Z8 1188 aa12.51□□□□□ -0.41
SNX6-209ENST00000557265 PHACTR4Q8IZ21 702 aa12.51□□□□□ -0.41
SNX6-209ENST00000557265 ASB12Q8WXK4 309 aa12.51□□□□□ -0.41
SNX6-209ENST00000557265 CENPTQ96BT3 561 aa12.51□□□□□ -0.41
SNX6-209ENST00000557265 LRRC61Q9BV99 259 aa12.51□□□□□ -0.41
SNX6-209ENST00000557265 SRRTQ9BXP5 876 aaKnown RBP12.51□□□□□ -0.41
SNX6-209ENST00000557265 SLC13A1Q9BZW2 595 aa12.51□□□□□ -0.41
SNX6-209ENST00000557265 CLPBQ9H078 707 aa12.51□□□□□ -0.41
SNX6-209ENST00000557265 RRN3Q9NYV6 651 aa12.51□□□□□ -0.41
SNX6-209ENST00000557265 GULP1Q9UBP9 304 aa12.51□□□□□ -0.41
SNX6-209ENST00000557265 PNMA8BQ9ULN7 279 aaPredicted RBP12.51□□□□□ -0.41
SNX6-209ENST00000557265 STAP1Q9ULZ2 295 aa12.51□□□□□ -0.41
SNX6-209ENST00000557265 PCDHGC3Q9UN70 934 aa12.51□□□□□ -0.41
SNX6-209ENST00000557265 CTNND2Q9UQB3 1225 aa12.51□□□□□ -0.41
SNX6-209ENST00000557265 NYNRINQ9P2P1 1898 aaKnown RBP12.51□□□□□ -0.41
SNX6-209ENST00000557265 NTN3O00634 580 aaPredicted RBP12.5□□□□□ -0.41
SNX6-209ENST00000557265 PLD2O14939 933 aa12.5□□□□□ -0.41
SNX6-209ENST00000557265 NOBOXO60393 691 aa12.5□□□□□ -0.41
SNX6-209ENST00000557265 TSHRP16473 764 aa12.5□□□□□ -0.41
SNX6-209ENST00000557265 SLC9A1P19634 815 aa12.5□□□□□ -0.41
SNX6-209ENST00000557265 SLC5A2P31639 672 aa12.5□□□□□ -0.41
SNX6-209ENST00000557265 KRT9P35527 623 aa12.5□□□□□ -0.41
SNX6-209ENST00000557265 ARF5P84085 180 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms