RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 TPI1P60174 286 aa10.5□□□□□ -0.73
SHMT2-224ENST00000556737 IL9RQ01113 521 aa10.5□□□□□ -0.73
SHMT2-224ENST00000556737 TSR1Q2NL82 804 aaKnown RBP10.5□□□□□ -0.73
SHMT2-224ENST00000556737 ZNF284Q2VY69 593 aa10.5□□□□□ -0.73
SHMT2-224ENST00000556737 TMEM259Q4ZIN3 620 aa10.5□□□□□ -0.73
SHMT2-224ENST00000556737 ATXN7L2Q5T6C5 722 aaPredicted RBP10.5□□□□□ -0.73
SHMT2-224ENST00000556737 AFMIDQ63HM1 303 aa10.5□□□□□ -0.73
SHMT2-224ENST00000556737 NEK5Q6P3R8 708 aa10.5□□□□□ -0.73
SHMT2-224ENST00000556737 RFX8Q6ZV50 586 aa10.5□□□□□ -0.73
SHMT2-224ENST00000556737 ADAT2Q7Z6V5 191 aaKnown RBP10.5□□□□□ -0.73
SHMT2-224ENST00000556737 GLRX5Q86SX6 157 aa10.5□□□□□ -0.73
SHMT2-224ENST00000556737 SPATS2Q86XZ4 545 aaKnown RBP10.5□□□□□ -0.73
SHMT2-224ENST00000556737 ARHGAP12Q8IWW6 846 aa10.5□□□□□ -0.73
SHMT2-224ENST00000556737 NPWQ8N729 165 aa10.5□□□□□ -0.73
SHMT2-224ENST00000556737 ARHGEF26Q96DR7 871 aa10.5□□□□□ -0.73
SHMT2-224ENST00000556737 PPP1R16AQ96I34 528 aa10.5□□□□□ -0.73
SHMT2-224ENST00000556737 EIF3CQ99613 913 aaKnown RBP10.5□□□□□ -0.73
SHMT2-224ENST00000556737 DHX35Q9H5Z1 703 aaKnown RBP10.5□□□□□ -0.73
SHMT2-224ENST00000556737 ZDHHC6Q9H6R6 413 aa10.5□□□□□ -0.73
SHMT2-224ENST00000556737 CATSPERBQ9H7T0 1116 aa10.5□□□□□ -0.73
SHMT2-224ENST00000556737 AASDHPPTQ9NRN7 309 aa10.5□□□□□ -0.73
SHMT2-224ENST00000556737 TOR4AQ9NXH8 423 aa10.5□□□□□ -0.73
SHMT2-224ENST00000556737 MYO1AQ9UBC5 1043 aa10.5□□□□□ -0.73
SHMT2-224ENST00000556737 HECAQ9UBI9 543 aaPredicted RBP10.5□□□□□ -0.73
SHMT2-224ENST00000556737 LHX3Q9UBR4 397 aa10.5□□□□□ -0.73
SHMT2-224ENST00000556737 PCSK1NQ9UHG2 260 aa10.5□□□□□ -0.73
SHMT2-224ENST00000556737 DMTF1Q9Y222 760 aa10.5□□□□□ -0.73
SHMT2-224ENST00000556737 CA5BQ9Y2D0 317 aa10.5□□□□□ -0.73
SHMT2-224ENST00000556737 FARP1Q9Y4F1 1045 aaPredicted RBP10.5□□□□□ -0.73
SHMT2-224ENST00000556737 FADS3Q9Y5Q0 445 aa10.5□□□□□ -0.73
SHMT2-224ENST00000556737 BZW2Q9Y6E2 419 aaKnown RBP10.5□□□□□ -0.73
SHMT2-224ENST00000556737 ZFHX4Q86UP3 3567 aa10.5□□□□□ -0.73
SHMT2-224ENST00000556737 MAP1BP46821 2468 aaKnown RBP10.49□□□□□ -0.73
SHMT2-224ENST00000556737 EPG5Q9HCE0 2579 aa10.49□□□□□ -0.73
SHMT2-224ENST00000556737 A0A1W2PQU0 124 aa10.49□□□□□ -0.73
SHMT2-224ENST00000556737 ZSCAN5CA6NGD5 496 aaPredicted RBP10.49□□□□□ -0.73
SHMT2-224ENST00000556737 AKR1B15C9JRZ8 316 aaPredicted RBP10.49□□□□□ -0.73
SHMT2-224ENST00000556737 EEF2KO00418 725 aaKnown RBP10.49□□□□□ -0.73
SHMT2-224ENST00000556737 BUB1O43683 1085 aa10.49□□□□□ -0.73
SHMT2-224ENST00000556737 AP1G1O43747 822 aa10.49□□□□□ -0.73
SHMT2-224ENST00000556737 HYAL3O43820 417 aaPredicted RBP10.49□□□□□ -0.73
SHMT2-224ENST00000556737 PCDHGA12O60330 932 aa10.49□□□□□ -0.73
SHMT2-224ENST00000556737 CYP1A2P05177 515 aa10.49□□□□□ -0.73
SHMT2-224ENST00000556737 FTH1P19P0C7X4 201 aa10.49□□□□□ -0.73
SHMT2-224ENST00000556737 PRLRP16471 622 aa10.49□□□□□ -0.73
SHMT2-224ENST00000556737 DESP17661 470 aa10.49□□□□□ -0.73
SHMT2-224ENST00000556737 CASP14P31944 242 aa10.49□□□□□ -0.73
SHMT2-224ENST00000556737 PCK1P35558 622 aa10.49□□□□□ -0.73
SHMT2-224ENST00000556737 DNA2P51530 1060 aa10.49□□□□□ -0.73
SHMT2-224ENST00000556737 NDST2P52849 883 aa10.49□□□□□ -0.73
SHMT2-224ENST00000556737 SLC25A11Q02978 314 aaKnown RBP10.49□□□□□ -0.73
SHMT2-224ENST00000556737 HNRNPDQ14103 355 aaKnown RBP10.49□□□□□ -0.73
SHMT2-224ENST00000556737 DPYSQ14117 519 aa10.49□□□□□ -0.73
SHMT2-224ENST00000556737 FGL2Q14314 439 aa10.49□□□□□ -0.73
SHMT2-224ENST00000556737 SETMARQ53H47 684 aaPredicted RBP10.49□□□□□ -0.73
SHMT2-224ENST00000556737 ERMARDQ5T6L9 678 aa10.49□□□□□ -0.73
SHMT2-224ENST00000556737 SEL1L3Q68CR1 1132 aa10.49□□□□□ -0.73
SHMT2-224ENST00000556737 GCNT7Q6ZNI0 430 aa10.49□□□□□ -0.73
SHMT2-224ENST00000556737 KANSL1Q7Z3B3 1105 aa10.49□□□□□ -0.73
SHMT2-224ENST00000556737 IQCHQ86VS3 1027 aa10.49□□□□□ -0.73
SHMT2-224ENST00000556737 HORMAD1Q86X24 394 aa10.49□□□□□ -0.73
SHMT2-224ENST00000556737 PSTKQ8IV42 348 aaKnown RBP10.49□□□□□ -0.73
SHMT2-224ENST00000556737 CNGA4Q8IV77 575 aa10.49□□□□□ -0.73
SHMT2-224ENST00000556737 NIPA2Q8N8Q9 360 aa10.49□□□□□ -0.73
SHMT2-224ENST00000556737 MFSD2AQ8NA29 543 aa10.49□□□□□ -0.73
SHMT2-224ENST00000556737 NETO2Q8NC67 525 aa10.49□□□□□ -0.73
SHMT2-224ENST00000556737 CASKIN2Q8WXE0 1202 aa10.49□□□□□ -0.73
SHMT2-224ENST00000556737 CELF6Q96J87 481 aaKnown RBP10.49□□□□□ -0.73
SHMT2-224ENST00000556737 LRIG1Q96JA1 1093 aa10.49□□□□□ -0.73
SHMT2-224ENST00000556737 GDAP1L1Q96MZ0 367 aa10.49□□□□□ -0.73
SHMT2-224ENST00000556737 ELF4Q99607 663 aaPredicted RBP10.49□□□□□ -0.73
SHMT2-224ENST00000556737 MRPL47Q9HD33 250 aaKnown RBP10.49□□□□□ -0.73
SHMT2-224ENST00000556737 FZD3Q9NPG1 666 aa10.49□□□□□ -0.73
SHMT2-224ENST00000556737 DYRK4Q9NR20 520 aa10.49□□□□□ -0.73
SHMT2-224ENST00000556737 GGT7Q9UJ14 662 aa10.49□□□□□ -0.73
SHMT2-224ENST00000556737 HPCAL4Q9UM19 191 aa10.49□□□□□ -0.73
SHMT2-224ENST00000556737 ITM2BQ9Y287 266 aa10.49□□□□□ -0.73
SHMT2-224ENST00000556737 LUC7L2Q9Y383 392 aaKnown RBP10.49□□□□□ -0.73
SHMT2-224ENST00000556737 PRAMEF26H0Y7S4 382 aa10.48□□□□□ -0.73
SHMT2-224ENST00000556737 J3KR12 359 aa10.48□□□□□ -0.73
SHMT2-224ENST00000556737 TLR4O00206 839 aa10.48□□□□□ -0.73
SHMT2-224ENST00000556737 KRIT1O00522 736 aa10.48□□□□□ -0.73
SHMT2-224ENST00000556737 PRPSAP2O60256 369 aa10.48□□□□□ -0.73
SHMT2-224ENST00000556737 PRAMEF11O60813 436 aa10.48□□□□□ -0.73
SHMT2-224ENST00000556737 RNF8O76064 485 aa10.48□□□□□ -0.73
SHMT2-224ENST00000556737 DKK1O94907 266 aa10.48□□□□□ -0.73
SHMT2-224ENST00000556737 UGT2B4P06133 528 aa10.48□□□□□ -0.73
SHMT2-224ENST00000556737 ERCC2P18074 760 aa10.48□□□□□ -0.73
SHMT2-224ENST00000556737 EPHA8P29322 1005 aaPredicted RBP10.48□□□□□ -0.73
SHMT2-224ENST00000556737 ADKP55263 362 aaKnown RBP10.48□□□□□ -0.73
SHMT2-224ENST00000556737 SNRPD1P62314 119 aaKnown RBP10.48□□□□□ -0.73
SHMT2-224ENST00000556737 CYTH1Q15438 398 aa10.48□□□□□ -0.73
SHMT2-224ENST00000556737 TRIP6Q15654 476 aaKnown RBP10.48□□□□□ -0.73
SHMT2-224ENST00000556737 DPYSL2Q16555 572 aa10.48□□□□□ -0.73
SHMT2-224ENST00000556737 SMTNL2Q2TAL5 461 aa10.48□□□□□ -0.73
SHMT2-224ENST00000556737 INO80DQ53TQ3 878 aaPredicted RBP10.48□□□□□ -0.73
SHMT2-224ENST00000556737 ZNF805Q5CZA5 627 aa10.48□□□□□ -0.73
SHMT2-224ENST00000556737 PRAMEF14Q5SWL7 426 aa10.48□□□□□ -0.73
SHMT2-224ENST00000556737 TXNRD3NBQ6F5E7 133 aa10.48□□□□□ -0.73
SHMT2-224ENST00000556737 RAB44Q7Z6P3 723 aaPredicted RBP10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms