RNA–Protein interactions for RNA: ENST00000556533.5

PSEN1-217, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 550 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-217ENST00000556533 DPP6P42658 865 aa17.34■□□□□ 0.37
PSEN1-217ENST00000556533 IRX4P78413 519 aa17.34■□□□□ 0.37
PSEN1-217ENST00000556533 CCDC15Q0P6D6 951 aa17.34■□□□□ 0.37
PSEN1-217ENST00000556533 PAFAH1B3Q15102 231 aaKnown RBP17.34■□□□□ 0.37
PSEN1-217ENST00000556533 LLGL1Q15334 1064 aa17.34■□□□□ 0.37
PSEN1-217ENST00000556533 TRIM61Q5EBN2 209 aa17.34■□□□□ 0.37
PSEN1-217ENST00000556533 C11orf63Q6NUN7 778 aa17.34■□□□□ 0.37
PSEN1-217ENST00000556533 FBXL19Q6PCT2 694 aa17.34■□□□□ 0.37
PSEN1-217ENST00000556533 GDPD4Q6W3E5 623 aa17.34■□□□□ 0.37
PSEN1-217ENST00000556533 ERN2Q76MJ5 926 aaKnown RBP17.34■□□□□ 0.37
PSEN1-217ENST00000556533 TXLNBQ8N3L3 684 aa17.34■□□□□ 0.37
PSEN1-217ENST00000556533 ZCCHC9Q8N567 271 aaKnown RBP17.34■□□□□ 0.37
PSEN1-217ENST00000556533 TSEN2Q8NCE0 465 aaKnown RBP17.34■□□□□ 0.37
PSEN1-217ENST00000556533 LRRN4Q8WUT4 740 aa17.34■□□□□ 0.37
PSEN1-217ENST00000556533 NSMCE1Q8WV22 266 aa17.34■□□□□ 0.37
PSEN1-217ENST00000556533 RNF157Q96PX1 679 aa17.34■□□□□ 0.37
PSEN1-217ENST00000556533 FSCN3Q9NQT6 498 aa17.34■□□□□ 0.37
PSEN1-217ENST00000556533 TRIM10Q9UDY6 481 aa17.34■□□□□ 0.37
PSEN1-217ENST00000556533 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.34■□□□□ 0.37
PSEN1-217ENST00000556533 ABCA7Q8IZY2 2146 aa17.33■□□□□ 0.37
PSEN1-217ENST00000556533 C3orf70A6NLC5 250 aaPredicted RBP17.33■□□□□ 0.36
PSEN1-217ENST00000556533 PJA2O43164 708 aa17.33■□□□□ 0.36
PSEN1-217ENST00000556533 SLC7A4O43246 635 aa17.33■□□□□ 0.36
PSEN1-217ENST00000556533 GDF9O60383 454 aa17.33■□□□□ 0.36
PSEN1-217ENST00000556533 MAFKO60675 156 aa17.33■□□□□ 0.36
PSEN1-217ENST00000556533 ITGB7P26010 798 aa17.33■□□□□ 0.36
PSEN1-217ENST00000556533 MAT2AP31153 395 aaKnown RBP17.33■□□□□ 0.36
PSEN1-217ENST00000556533 DYNLT1P63172 113 aa17.33■□□□□ 0.36
PSEN1-217ENST00000556533 LMNB2Q03252 620 aa17.33■□□□□ 0.36
PSEN1-217ENST00000556533 GBE1Q04446 702 aa17.33■□□□□ 0.36
PSEN1-217ENST00000556533 SLC10A7Q0GE19 358 aa17.33■□□□□ 0.36
PSEN1-217ENST00000556533 LBRQ14739 615 aaKnown RBP17.33■□□□□ 0.36
PSEN1-217ENST00000556533 DUOXA1Q1HG43 343 aa17.33■□□□□ 0.36
PSEN1-217ENST00000556533 AGBL4Q5VU57 503 aa17.33■□□□□ 0.36
PSEN1-217ENST00000556533 SRLQ86TD4 932 aa17.33■□□□□ 0.36
PSEN1-217ENST00000556533 CEP76Q8TAP6 659 aa17.33■□□□□ 0.36
PSEN1-217ENST00000556533 KIAA1524Q8TCG1 905 aa17.33■□□□□ 0.36
PSEN1-217ENST00000556533 DNASE2BQ8WZ79 361 aa17.33■□□□□ 0.36
PSEN1-217ENST00000556533 FAF2Q96CS3 445 aa17.33■□□□□ 0.36
PSEN1-217ENST00000556533 KLHL32Q96NJ5 620 aa17.33■□□□□ 0.36
PSEN1-217ENST00000556533 NUSAP1Q9BXS6 441 aaKnown RBP17.33■□□□□ 0.36
PSEN1-217ENST00000556533 HDAC8Q9BY41 377 aa17.33■□□□□ 0.36
PSEN1-217ENST00000556533 RXFP3Q9NSD7 469 aa17.33■□□□□ 0.36
PSEN1-217ENST00000556533 SEPT3Q9UH03 358 aa17.33■□□□□ 0.36
PSEN1-217ENST00000556533 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.33■□□□□ 0.36
PSEN1-217ENST00000556533 HEY1Q9Y5J3 304 aa17.33■□□□□ 0.36
PSEN1-217ENST00000556533 PIEZO1Q92508 2521 aa17.33■□□□□ 0.36
PSEN1-217ENST00000556533 SDK1Q7Z5N4 2213 aa17.32■□□□□ 0.36
PSEN1-217ENST00000556533 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.32■□□□□ 0.36
PSEN1-217ENST00000556533 BTNL10A8MVZ5 291 aa17.32■□□□□ 0.36
PSEN1-217ENST00000556533 APOL1O14791 398 aa17.32■□□□□ 0.36
PSEN1-217ENST00000556533 BCAT2O15382 392 aaPredicted RBP17.32■□□□□ 0.36
PSEN1-217ENST00000556533 PSTPIP1O43586 416 aa17.32■□□□□ 0.36
PSEN1-217ENST00000556533 PLRG1O43660 514 aaKnown RBP17.32■□□□□ 0.36
PSEN1-217ENST00000556533 PCDH8O95206 1070 aa17.32■□□□□ 0.36
PSEN1-217ENST00000556533 IGHV4-34P06331 123 aa17.32■□□□□ 0.36
PSEN1-217ENST00000556533 RGRP47804 291 aa17.32■□□□□ 0.36
PSEN1-217ENST00000556533 MARCKSL1P49006 195 aa17.32■□□□□ 0.36
PSEN1-217ENST00000556533 GALNT2Q10471 571 aa17.32■□□□□ 0.36
PSEN1-217ENST00000556533 ZNF235Q14590 738 aa17.32■□□□□ 0.36
PSEN1-217ENST00000556533 RFTN1Q14699 578 aaPredicted RBP17.32■□□□□ 0.36
PSEN1-217ENST00000556533 ZNF805Q5CZA5 627 aa17.32■□□□□ 0.36
PSEN1-217ENST00000556533 PIP5KL1Q5T9C9 394 aa17.32■□□□□ 0.36
PSEN1-217ENST00000556533 TMCO4Q5TGY1 634 aa17.32■□□□□ 0.36
PSEN1-217ENST00000556533 MFSD7Q6UXD7 560 aa17.32■□□□□ 0.36
PSEN1-217ENST00000556533 CCDC50Q8IVM0 306 aa17.32■□□□□ 0.36
PSEN1-217ENST00000556533 PAF1Q8N7H5 531 aa17.32■□□□□ 0.36
PSEN1-217ENST00000556533 CCNYQ8ND76 341 aa17.32■□□□□ 0.36
PSEN1-217ENST00000556533 LRIG1Q96JA1 1093 aa17.32■□□□□ 0.36
PSEN1-217ENST00000556533 CALR3Q96L12 384 aaKnown RBP17.32■□□□□ 0.36
PSEN1-217ENST00000556533 ZNF599Q96NL3 588 aa17.32■□□□□ 0.36
PSEN1-217ENST00000556533 OSBPL1AQ9BXW6 950 aa17.32■□□□□ 0.36
PSEN1-217ENST00000556533 SUSD2Q9UGT4 822 aa17.32■□□□□ 0.36
PSEN1-217ENST00000556533 SLC6A14Q9UN76 642 aa17.32■□□□□ 0.36
PSEN1-217ENST00000556533 EP300Q09472 2414 aaPredicted RBP17.31■□□□□ 0.36
PSEN1-217ENST00000556533 TTC24A2A3L6 582 aaPredicted RBP17.31■□□□□ 0.36
PSEN1-217ENST00000556533 C16orf96A6NNT2 1141 aa17.31■□□□□ 0.36
PSEN1-217ENST00000556533 MUSKO15146 869 aa17.31■□□□□ 0.36
PSEN1-217ENST00000556533 FOXD2O60548 495 aaPredicted RBP17.31■□□□□ 0.36
PSEN1-217ENST00000556533 RNGTTO60942 597 aaKnown RBP17.31■□□□□ 0.36
PSEN1-217ENST00000556533 ZRANB2O95218 330 aaKnown RBP eCLIP17.31■□□□□ 0.36
PSEN1-217ENST00000556533 PIGNO95427 931 aa17.31■□□□□ 0.36
PSEN1-217ENST00000556533 KRT10P13645 584 aa17.31■□□□□ 0.36
PSEN1-217ENST00000556533 CD27P26842 260 aa17.31■□□□□ 0.36
PSEN1-217ENST00000556533 HOXD12P35452 270 aa17.31■□□□□ 0.36
PSEN1-217ENST00000556533 GARSP41250 739 aaKnown RBP17.31■□□□□ 0.36
PSEN1-217ENST00000556533 SCNN1BP51168 640 aa17.31■□□□□ 0.36
PSEN1-217ENST00000556533 RENBPP51606 427 aa17.31■□□□□ 0.36
PSEN1-217ENST00000556533 NEK3P51956 506 aa17.31■□□□□ 0.36
PSEN1-217ENST00000556533 TAS2R38P59533 333 aa17.31■□□□□ 0.36
PSEN1-217ENST00000556533 PPP2CBP62714 309 aa17.31■□□□□ 0.36
PSEN1-217ENST00000556533 PPP2CAP67775 309 aa17.31■□□□□ 0.36
PSEN1-217ENST00000556533 SLC10A2Q12908 348 aaPredicted RBP17.31■□□□□ 0.36
PSEN1-217ENST00000556533 IFI16Q16666 785 aaKnown RBP17.31■□□□□ 0.36
PSEN1-217ENST00000556533 MARC1Q5VT66 337 aa17.31■□□□□ 0.36
PSEN1-217ENST00000556533 PEAR1Q5VY43 1037 aaPredicted RBP17.31■□□□□ 0.36
PSEN1-217ENST00000556533 KAZNQ674X7 775 aa17.31■□□□□ 0.36
PSEN1-217ENST00000556533 PARS2Q7L3T8 475 aaKnown RBP17.31■□□□□ 0.36
PSEN1-217ENST00000556533 RABEPKQ7Z6M1 372 aa17.31■□□□□ 0.36
PSEN1-217ENST00000556533 TTC7BQ86TV6 843 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms