RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 C3orf20Q8ND61 904 aa22.99■■□□□ 1.27
ACTN1-220ENST00000556433 FAM174AQ8TBP5 190 aa22.99■■□□□ 1.27
ACTN1-220ENST00000556433 NTAN1Q96AB6 310 aa22.99■■□□□ 1.27
ACTN1-220ENST00000556433 AGPAT1Q99943 283 aa22.99■■□□□ 1.27
ACTN1-220ENST00000556433 UCKL1Q9NWZ5 548 aa22.99■■□□□ 1.27
ACTN1-220ENST00000556433 NEU3Q9UQ49 428 aa22.99■■□□□ 1.27
ACTN1-220ENST00000556433 FREM2Q5SZK8 3169 aa22.98■■□□□ 1.27
ACTN1-220ENST00000556433 C16orf96A6NNT2 1141 aa22.98■■□□□ 1.27
ACTN1-220ENST00000556433 AP1G1O43747 822 aa22.98■■□□□ 1.27
ACTN1-220ENST00000556433 FGL2Q14314 439 aa22.98■■□□□ 1.27
ACTN1-220ENST00000556433 SCYL2Q6P3W7 929 aa22.98■■□□□ 1.27
ACTN1-220ENST00000556433 DCP2Q8IU60 420 aaKnown RBP22.98■■□□□ 1.27
ACTN1-220ENST00000556433 OR2AP1Q8NGE2 309 aa22.98■■□□□ 1.27
ACTN1-220ENST00000556433 LRIG1Q96JA1 1093 aa22.98■■□□□ 1.27
ACTN1-220ENST00000556433 BMFQ96LC9 184 aa22.98■■□□□ 1.27
ACTN1-220ENST00000556433 ERGIC2Q96RQ1 377 aa22.98■■□□□ 1.27
ACTN1-220ENST00000556433 DSPP15924 2871 aaKnown RBP22.98■■□□□ 1.27
ACTN1-220ENST00000556433 TRPM6Q9BX84 2022 aa22.98■■□□□ 1.27
ACTN1-220ENST00000556433 A6NNZ2 444 aa22.97■■□□□ 1.27
ACTN1-220ENST00000556433 KRIT1O00522 736 aa22.97■■□□□ 1.27
ACTN1-220ENST00000556433 FFAR2O15552 330 aa22.97■■□□□ 1.27
ACTN1-220ENST00000556433 BUB1O43683 1085 aa22.97■■□□□ 1.27
ACTN1-220ENST00000556433 KDELR3O43731 214 aa22.97■■□□□ 1.27
ACTN1-220ENST00000556433 PIAS2O75928 621 aa22.97■■□□□ 1.27
ACTN1-220ENST00000556433 POP4O95707 220 aaKnown RBP22.97■■□□□ 1.27
ACTN1-220ENST00000556433 GSRP00390 522 aa22.97■■□□□ 1.27
ACTN1-220ENST00000556433 ACP1P24666 158 aa22.97■■□□□ 1.27
ACTN1-220ENST00000556433 SNRPD1P62314 119 aaKnown RBP22.97■■□□□ 1.27
ACTN1-220ENST00000556433 DAB2P98082 770 aa22.97■■□□□ 1.27
ACTN1-220ENST00000556433 SGCGQ13326 291 aa22.97■■□□□ 1.27
ACTN1-220ENST00000556433 MYLK3Q32MK0 819 aa22.97■■□□□ 1.27
ACTN1-220ENST00000556433 ZNF805Q5CZA5 627 aa22.97■■□□□ 1.27
ACTN1-220ENST00000556433 ZNF542PQ5EBM4 170 aa22.97■■□□□ 1.27
ACTN1-220ENST00000556433 DNAJC24Q6P3W2 148 aa22.97■■□□□ 1.27
ACTN1-220ENST00000556433 PTAR1Q7Z6K3 402 aaPredicted RBP22.97■■□□□ 1.27
ACTN1-220ENST00000556433 ZNF354CQ86Y25 554 aa22.97■■□□□ 1.27
ACTN1-220ENST00000556433 SLC22A18ASQ8N1D0 253 aa22.97■■□□□ 1.27
ACTN1-220ENST00000556433 PYROXD2Q8N2H3 581 aa22.97■■□□□ 1.27
ACTN1-220ENST00000556433 CAAP1Q9H8G2 361 aa22.97■■□□□ 1.27
ACTN1-220ENST00000556433 ANKRD62A6NC57 917 aa22.96■■□□□ 1.27
ACTN1-220ENST00000556433 POM121BA6NF01 834 aa22.96■■□□□ 1.27
ACTN1-220ENST00000556433 IGLON5A6NGN9 336 aa22.96■■□□□ 1.27
ACTN1-220ENST00000556433 NEMP1O14524 444 aa22.96■■□□□ 1.27
ACTN1-220ENST00000556433 RAD51BO15315 384 aa22.96■■□□□ 1.27
ACTN1-220ENST00000556433 TSPAN6O43657 245 aa22.96■■□□□ 1.27
ACTN1-220ENST00000556433 HOXB3P14651 431 aaPredicted RBP22.96■■□□□ 1.27
ACTN1-220ENST00000556433 EPHB2P29323 1055 aa22.96■■□□□ 1.27
ACTN1-220ENST00000556433 ZNF143P52747 638 aaPredicted RBP22.96■■□□□ 1.27
ACTN1-220ENST00000556433 C1QBPQ07021 282 aaKnown RBP22.96■■□□□ 1.27
ACTN1-220ENST00000556433 EFHC2Q5JST6 749 aa22.96■■□□□ 1.27
ACTN1-220ENST00000556433 MON1BQ7L1V2 547 aa22.96■■□□□ 1.27
ACTN1-220ENST00000556433 OR4C6Q8NH72 309 aa22.96■■□□□ 1.27
ACTN1-220ENST00000556433 RAB7BQ96AH8 199 aa22.96■■□□□ 1.27
ACTN1-220ENST00000556433 NXPE2Q96DL1 559 aa22.96■■□□□ 1.27
ACTN1-220ENST00000556433 IFT43Q96FT9 208 aa22.96■■□□□ 1.27
ACTN1-220ENST00000556433 C1QTNF2Q9BXJ5 285 aa22.96■■□□□ 1.27
ACTN1-220ENST00000556433 DNAJC28Q9NX36 388 aa22.96■■□□□ 1.27
ACTN1-220ENST00000556433 ADAMTS20P59510 1910 aa22.96■■□□□ 1.27
ACTN1-220ENST00000556433 ZSCAN5CA6NGD5 496 aaPredicted RBP22.95■■□□□ 1.26
ACTN1-220ENST00000556433 GOLGA6L22H0YM25 854 aa22.95■■□□□ 1.26
ACTN1-220ENST00000556433 CCP110O43303 1012 aa22.95■■□□□ 1.26
ACTN1-220ENST00000556433 UGT2B4P06133 528 aa22.95■■□□□ 1.26
ACTN1-220ENST00000556433 ABL2P42684 1182 aa22.95■■□□□ 1.26
ACTN1-220ENST00000556433 E2F1Q01094 437 aa22.95■■□□□ 1.26
ACTN1-220ENST00000556433 NCAPHQ15003 741 aa22.95■■□□□ 1.26
ACTN1-220ENST00000556433 ATXN7L2Q5T6C5 722 aaPredicted RBP22.95■■□□□ 1.26
ACTN1-220ENST00000556433 KYAT3Q6YP21 454 aaKnown RBP22.95■■□□□ 1.26
ACTN1-220ENST00000556433 PDZD3Q86UT5 571 aa22.95■■□□□ 1.26
ACTN1-220ENST00000556433 ZSCAN30Q86W11 494 aa22.95■■□□□ 1.26
ACTN1-220ENST00000556433 RTL3Q8N8U3 475 aaKnown RBP22.95■■□□□ 1.26
ACTN1-220ENST00000556433 KLHL32Q96NJ5 620 aa22.95■■□□□ 1.26
ACTN1-220ENST00000556433 NOL6Q9H6R4 1146 aaKnown RBP22.95■■□□□ 1.26
ACTN1-220ENST00000556433 SCUBE2Q9NQ36 999 aa22.95■■□□□ 1.26
ACTN1-220ENST00000556433 IPO11Q9UI26 975 aaKnown RBP22.95■■□□□ 1.26
ACTN1-220ENST00000556433 AK5Q9Y6K8 562 aa22.95■■□□□ 1.26
ACTN1-220ENST00000556433 TCRBV5S1A1TA0A578 114 aa22.94■■□□□ 1.26
ACTN1-220ENST00000556433 FPGTO14772 594 aa22.94■■□□□ 1.26
ACTN1-220ENST00000556433 CCDC172P0C7W6 258 aa22.94■■□□□ 1.26
ACTN1-220ENST00000556433 GIMD1P0DJR0 217 aa22.94■■□□□ 1.26
ACTN1-220ENST00000556433 RPL7AP62424 266 aaKnown RBP22.94■■□□□ 1.26
ACTN1-220ENST00000556433 ACAD10Q6JQN1 1059 aa22.94■■□□□ 1.26
ACTN1-220ENST00000556433 APTXQ7Z2E3 356 aaKnown RBP22.94■■□□□ 1.26
ACTN1-220ENST00000556433 TMC6Q7Z403 805 aa22.94■■□□□ 1.26
ACTN1-220ENST00000556433 MCEEQ96PE7 176 aa22.94■■□□□ 1.26
ACTN1-220ENST00000556433 LENG8Q96PV6 779 aaPredicted RBP22.94■■□□□ 1.26
ACTN1-220ENST00000556433 CNPY3Q9BT09 278 aa22.94■■□□□ 1.26
ACTN1-220ENST00000556433 OSBPL1AQ9BXW6 950 aa22.94■■□□□ 1.26
ACTN1-220ENST00000556433 HSD3B7Q9H2F3 369 aa22.94■■□□□ 1.26
ACTN1-220ENST00000556433 FZD10Q9ULW2 581 aa22.94■■□□□ 1.26
ACTN1-220ENST00000556433 ITM2BQ9Y287 266 aa22.94■■□□□ 1.26
ACTN1-220ENST00000556433 TDRD6O60522 2096 aaKnown RBP22.93■■□□□ 1.26
ACTN1-220ENST00000556433 NEMP2A6NFY4 417 aa22.93■■□□□ 1.26
ACTN1-220ENST00000556433 CREB3O43889 395 aa22.93■■□□□ 1.26
ACTN1-220ENST00000556433 TMCC1O94876 653 aa22.93■■□□□ 1.26
ACTN1-220ENST00000556433 ALPPL2P10696 532 aa22.93■■□□□ 1.26
ACTN1-220ENST00000556433 FERP16591 822 aa22.93■■□□□ 1.26
ACTN1-220ENST00000556433 RABIFP47224 123 aa22.93■■□□□ 1.26
ACTN1-220ENST00000556433 INSM1Q01101 510 aaPredicted RBP22.93■■□□□ 1.26
ACTN1-220ENST00000556433 RAD51Q06609 339 aa22.93■■□□□ 1.26
ACTN1-220ENST00000556433 FZD2Q14332 565 aa22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms