RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 GRM3Q14832 879 aa15.18■□□□□ 0.02
ARHGEF40-207ENST00000556399 SLC8A2Q9UPR5 921 aa15.18■□□□□ 0.02
ARHGEF40-207ENST00000556399 NR2E3Q9Y5X4 410 aa15.18■□□□□ 0.02
ARHGEF40-207ENST00000556399 SNAP91O60641 907 aa15.18■□□□□ 0.02
ARHGEF40-207ENST00000556399 SLC2A4P14672 509 aa15.18■□□□□ 0.02
ARHGEF40-207ENST00000556399 CCT8P50990 548 aa15.18■□□□□ 0.02
ARHGEF40-207ENST00000556399 FSTL1Q12841 308 aa15.18■□□□□ 0.02
ARHGEF40-207ENST00000556399 MAPK11Q15759 364 aa15.18■□□□□ 0.02
ARHGEF40-207ENST00000556399 RGS21Q2M5E4 152 aa15.18■□□□□ 0.02
ARHGEF40-207ENST00000556399 MGAT5BQ3V5L5 792 aa15.18■□□□□ 0.02
ARHGEF40-207ENST00000556399 ZYG11AQ6WRX3 759 aa15.18■□□□□ 0.02
ARHGEF40-207ENST00000556399 CUZD1Q86UP6 607 aa15.18■□□□□ 0.02
ARHGEF40-207ENST00000556399 HOMEZQ8IX15 550 aa15.18■□□□□ 0.02
ARHGEF40-207ENST00000556399 ZNF567Q8N184 647 aa15.18■□□□□ 0.02
ARHGEF40-207ENST00000556399 ZFAND2BQ8WV99 257 aa15.18■□□□□ 0.02
ARHGEF40-207ENST00000556399 PIDD1Q9HB75 910 aa15.18■□□□□ 0.02
ARHGEF40-207ENST00000556399 TAS2R13Q9NYV9 303 aa15.18■□□□□ 0.02
ARHGEF40-207ENST00000556399 RCOR3Q9P2K3 495 aaPredicted RBP15.18■□□□□ 0.02
ARHGEF40-207ENST00000556399 FARP1Q9Y4F1 1045 aaPredicted RBP15.18■□□□□ 0.02
ARHGEF40-207ENST00000556399 GPR25O00155 361 aa15.18■□□□□ 0.02
ARHGEF40-207ENST00000556399 GPD2P43304 727 aa15.18■□□□□ 0.02
ARHGEF40-207ENST00000556399 BNIP2Q12982 314 aa15.18■□□□□ 0.02
ARHGEF40-207ENST00000556399 NR1D2Q14995 579 aa15.18■□□□□ 0.02
ARHGEF40-207ENST00000556399 SNX17Q15036 470 aa15.18■□□□□ 0.02
ARHGEF40-207ENST00000556399 ZNF554Q86TJ5 538 aa15.18■□□□□ 0.02
ARHGEF40-207ENST00000556399 ZNF276Q8N554 614 aa15.18■□□□□ 0.02
ARHGEF40-207ENST00000556399 GTF3C2Q8WUA4 911 aaPredicted RBP15.18■□□□□ 0.02
ARHGEF40-207ENST00000556399 FAM120BQ96EK7 910 aaKnown RBP15.18■□□□□ 0.02
ARHGEF40-207ENST00000556399 ARHGEF4Q9NR80 690 aa15.18■□□□□ 0.02
ARHGEF40-207ENST00000556399 RNF181Q9P0P0 153 aa15.18■□□□□ 0.02
ARHGEF40-207ENST00000556399 HMGXB4Q9UGU5 601 aa15.18■□□□□ 0.02
ARHGEF40-207ENST00000556399 FAM32AQ9Y421 112 aaKnown RBP15.18■□□□□ 0.02
ARHGEF40-207ENST00000556399 AKAP11Q9UKA4 1901 aa15.18■□□□□ 0.02
ARHGEF40-207ENST00000556399 FAM159BA6NKW6 160 aa15.18■□□□□ 0.02
ARHGEF40-207ENST00000556399 CLDN5O00501 218 aa15.18■□□□□ 0.02
ARHGEF40-207ENST00000556399 AMIGO3Q86WK7 504 aa15.18■□□□□ 0.02
ARHGEF40-207ENST00000556399 C8orf59Q8N0T1 100 aaPredicted RBP15.18■□□□□ 0.02
ARHGEF40-207ENST00000556399 EID3Q8N140 333 aa15.18■□□□□ 0.02
ARHGEF40-207ENST00000556399 CRYGNQ8WXF5 182 aa15.18■□□□□ 0.02
ARHGEF40-207ENST00000556399 UGT2B28Q9BY64 529 aa15.18■□□□□ 0.02
ARHGEF40-207ENST00000556399 ATAD3AQ9NVI7 634 aa15.18■□□□□ 0.02
ARHGEF40-207ENST00000556399 ATRNL1Q5VV63 1379 aa15.17■□□□□ 0.02
ARHGEF40-207ENST00000556399 PHRF1Q9P1Y6 1649 aaKnown RBP15.17■□□□□ 0.02
ARHGEF40-207ENST00000556399 PIGRP01833 764 aa15.17■□□□□ 0.02
ARHGEF40-207ENST00000556399 SEMA5AQ13591 1074 aa15.17■□□□□ 0.02
ARHGEF40-207ENST00000556399 CGB2Q6NT52 195 aa15.17■□□□□ 0.02
ARHGEF40-207ENST00000556399 LRTOMTQ8WZ04 291 aa15.17■□□□□ 0.02
ARHGEF40-207ENST00000556399 RORBQ92753 470 aa15.17■□□□□ 0.02
ARHGEF40-207ENST00000556399 NXNL1Q96CM4 212 aa15.17■□□□□ 0.02
ARHGEF40-207ENST00000556399 ACOX2Q99424 681 aa15.17■□□□□ 0.02
ARHGEF40-207ENST00000556399 DTLQ9NZJ0 730 aa15.17■□□□□ 0.02
ARHGEF40-207ENST00000556399 SLC13A4Q9UKG4 626 aa15.17■□□□□ 0.02
ARHGEF40-207ENST00000556399 KATNA1O75449 491 aa15.17■□□□□ 0.02
ARHGEF40-207ENST00000556399 HGFP14210 728 aa15.17■□□□□ 0.02
ARHGEF40-207ENST00000556399 PTPN9P43378 593 aa15.17■□□□□ 0.02
ARHGEF40-207ENST00000556399 DLG2Q15700 870 aa15.17■□□□□ 0.02
ARHGEF40-207ENST00000556399 AARS2Q5JTZ9 985 aaKnown RBP15.17■□□□□ 0.02
ARHGEF40-207ENST00000556399 DNAJC14Q6Y2X3 702 aaPredicted RBP15.17■□□□□ 0.02
ARHGEF40-207ENST00000556399 PDSS2Q86YH6 399 aa15.17■□□□□ 0.02
ARHGEF40-207ENST00000556399 OR56A4Q8NGH8 313 aa15.17■□□□□ 0.02
ARHGEF40-207ENST00000556399 NDRG1Q92597 394 aaKnown RBP15.17■□□□□ 0.02
ARHGEF40-207ENST00000556399 TRAF6Q9Y4K3 522 aa15.17■□□□□ 0.02
ARHGEF40-207ENST00000556399 AP2A1O95782 977 aa15.17■□□□□ 0.02
ARHGEF40-207ENST00000556399 HOXC6P09630 235 aa15.17■□□□□ 0.02
ARHGEF40-207ENST00000556399 ATXN1P54253 815 aaKnown RBP15.17■□□□□ 0.02
ARHGEF40-207ENST00000556399 SFT2D3Q587I9 215 aa15.17■□□□□ 0.02
ARHGEF40-207ENST00000556399 ZNF618Q5T7W0 954 aa15.17■□□□□ 0.02
ARHGEF40-207ENST00000556399 BROXQ5VW32 411 aa15.17■□□□□ 0.02
ARHGEF40-207ENST00000556399 FRMD7Q6ZUT3 714 aa15.17■□□□□ 0.02
ARHGEF40-207ENST00000556399 SLC26A9Q7LBE3 791 aa15.17■□□□□ 0.02
ARHGEF40-207ENST00000556399 SFRP1Q8N474 314 aa15.17■□□□□ 0.02
ARHGEF40-207ENST00000556399 METTL6Q8TCB7 284 aa15.17■□□□□ 0.02
ARHGEF40-207ENST00000556399 AGAP2Q99490 1192 aa15.17■□□□□ 0.02
ARHGEF40-207ENST00000556399 EPS8L2Q9H6S3 715 aa15.17■□□□□ 0.02
ARHGEF40-207ENST00000556399 HMG20AQ9NP66 347 aa15.17■□□□□ 0.02
ARHGEF40-207ENST00000556399 BTN3A1O00481 513 aa15.17■□□□□ 0.02
ARHGEF40-207ENST00000556399 EDIL3O43854 480 aa15.17■□□□□ 0.02
ARHGEF40-207ENST00000556399 TNK2Q07912 1038 aa15.17■□□□□ 0.02
ARHGEF40-207ENST00000556399 POLD3Q15054 466 aaPredicted RBP15.17■□□□□ 0.02
ARHGEF40-207ENST00000556399 LRRC52Q8N7C0 313 aa15.17■□□□□ 0.02
ARHGEF40-207ENST00000556399 PRR11Q96HE9 360 aaPredicted RBP15.17■□□□□ 0.02
ARHGEF40-207ENST00000556399 HGH1Q9BTY7 390 aa15.17■□□□□ 0.02
ARHGEF40-207ENST00000556399 RMND5AQ9H871 391 aa15.17■□□□□ 0.02
ARHGEF40-207ENST00000556399 PNPLA8Q9NP80 782 aa15.17■□□□□ 0.02
ARHGEF40-207ENST00000556399 BTRCQ9Y297 605 aa15.17■□□□□ 0.02
ARHGEF40-207ENST00000556399 PTPRJQ12913 1337 aa15.16■□□□□ 0.02
ARHGEF40-207ENST00000556399 CBFA2T3O75081 653 aa15.16■□□□□ 0.02
ARHGEF40-207ENST00000556399 WDR47O94967 919 aa15.16■□□□□ 0.02
ARHGEF40-207ENST00000556399 TOP3BO95985 862 aaKnown RBP15.16■□□□□ 0.02
ARHGEF40-207ENST00000556399 CDH13P55290 713 aa15.16■□□□□ 0.02
ARHGEF40-207ENST00000556399 SENP8Q96LD8 212 aa15.16■□□□□ 0.02
ARHGEF40-207ENST00000556399 ZNF512Q96ME7 567 aaPredicted RBP15.16■□□□□ 0.02
ARHGEF40-207ENST00000556399 H3BNX3 289 aa15.16■□□□□ 0.02
ARHGEF40-207ENST00000556399 COL6A2P12110 1019 aa15.16■□□□□ 0.02
ARHGEF40-207ENST00000556399 CCNA2P20248 432 aa15.16■□□□□ 0.02
ARHGEF40-207ENST00000556399 GRM5P41594 1212 aa15.16■□□□□ 0.02
ARHGEF40-207ENST00000556399 RECQLP46063 649 aaPredicted RBP15.16■□□□□ 0.02
ARHGEF40-207ENST00000556399 OR1G1P47890 313 aa15.16■□□□□ 0.02
ARHGEF40-207ENST00000556399 TEX44Q53QW1 395 aa15.16■□□□□ 0.02
ARHGEF40-207ENST00000556399 DPY30Q9C005 99 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms