RNA–Protein interactions for RNA: ENST00000556375.5

SLIRP-206, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-206ENST00000556375 TBC1D3EA0A087X179 549 aa11.71□□□□□ -0.53
SLIRP-206ENST00000556375 TBC1D3KA0A087X1G2 549 aa11.71□□□□□ -0.53
SLIRP-206ENST00000556375 TBC1D3FA6NER0 549 aaPredicted RBP11.71□□□□□ -0.53
SLIRP-206ENST00000556375 TBC1D3LB9A6J9 549 aa11.71□□□□□ -0.53
SLIRP-206ENST00000556375 RNF103O00237 685 aa11.71□□□□□ -0.53
SLIRP-206ENST00000556375 KRIT1O00522 736 aa11.71□□□□□ -0.53
SLIRP-206ENST00000556375 OPHN1O60890 802 aa11.71□□□□□ -0.53
SLIRP-206ENST00000556375 MTA2O94776 668 aa11.71□□□□□ -0.53
SLIRP-206ENST00000556375 CER1O95813 267 aa11.71□□□□□ -0.53
SLIRP-206ENST00000556375 TBC1D3HP0C7X1 549 aa11.71□□□□□ -0.53
SLIRP-206ENST00000556375 SSR1P43307 286 aaKnown RBP11.71□□□□□ -0.53
SLIRP-206ENST00000556375 PAPOLAP51003 745 aaKnown RBP11.71□□□□□ -0.53
SLIRP-206ENST00000556375 CDH6P55285 790 aa11.71□□□□□ -0.53
SLIRP-206ENST00000556375 RACK1P63244 317 aaKnown RBP11.71□□□□□ -0.53
SLIRP-206ENST00000556375 BNC1Q01954 994 aa11.71□□□□□ -0.53
SLIRP-206ENST00000556375 KRT81Q14533 505 aa11.71□□□□□ -0.53
SLIRP-206ENST00000556375 UAP1L1Q3KQV9 507 aa11.71□□□□□ -0.53
SLIRP-206ENST00000556375 ATXN7L2Q5T6C5 722 aaPredicted RBP11.71□□□□□ -0.53
SLIRP-206ENST00000556375 TBC1D3GQ6DHY5 549 aa11.71□□□□□ -0.53
SLIRP-206ENST00000556375 TBC1D3CQ6IPX1 549 aa11.71□□□□□ -0.53
SLIRP-206ENST00000556375 NEK5Q6P3R8 708 aa11.71□□□□□ -0.53
SLIRP-206ENST00000556375 IL27RAQ6UWB1 636 aa11.71□□□□□ -0.53
SLIRP-206ENST00000556375 TMCO3Q6UWJ1 677 aa11.71□□□□□ -0.53
SLIRP-206ENST00000556375 PARS2Q7L3T8 475 aaKnown RBP11.71□□□□□ -0.53
SLIRP-206ENST00000556375 TBC1D3Q8IZP1 549 aaPredicted RBP11.71□□□□□ -0.53
SLIRP-206ENST00000556375 RYBPQ8N488 228 aaPredicted RBP11.71□□□□□ -0.53
SLIRP-206ENST00000556375 OR6K2Q8NGY2 324 aa11.71□□□□□ -0.53
SLIRP-206ENST00000556375 FAM71BQ8TC56 605 aa11.71□□□□□ -0.53
SLIRP-206ENST00000556375 SLC6A18Q96N87 628 aa11.71□□□□□ -0.53
SLIRP-206ENST00000556375 OSBPL1AQ9BXW6 950 aa11.71□□□□□ -0.53
SLIRP-206ENST00000556375 EBF2Q9HAK2 575 aa11.71□□□□□ -0.53
SLIRP-206ENST00000556375 LHX3Q9UBR4 397 aa11.71□□□□□ -0.53
SLIRP-206ENST00000556375 DMTF1Q9Y222 760 aa11.71□□□□□ -0.53
SLIRP-206ENST00000556375 A0A1B0GVT2 93 aa11.7□□□□□ -0.54
SLIRP-206ENST00000556375 UPK3BL1B0FP48 263 aa11.7□□□□□ -0.54
SLIRP-206ENST00000556375 UPK3BL2E5RIL1 263 aa11.7□□□□□ -0.54
SLIRP-206ENST00000556375 J3KR12 359 aa11.7□□□□□ -0.54
SLIRP-206ENST00000556375 DFFAO00273 331 aa11.7□□□□□ -0.54
SLIRP-206ENST00000556375 GJB3O75712 270 aa11.7□□□□□ -0.54
SLIRP-206ENST00000556375 POP4O95707 220 aaKnown RBP11.7□□□□□ -0.54
SLIRP-206ENST00000556375 KRT7P08729 469 aa11.7□□□□□ -0.54
SLIRP-206ENST00000556375 ADRB3P13945 408 aa11.7□□□□□ -0.54
SLIRP-206ENST00000556375 AMPD1P23109 780 aa11.7□□□□□ -0.54
SLIRP-206ENST00000556375 GKP32189 559 aa11.7□□□□□ -0.54
SLIRP-206ENST00000556375 SERPINB6P35237 376 aa11.7□□□□□ -0.54
SLIRP-206ENST00000556375 GJC1P36383 396 aa11.7□□□□□ -0.54
SLIRP-206ENST00000556375 CSNK1EP49674 416 aaKnown RBP11.7□□□□□ -0.54
SLIRP-206ENST00000556375 ARSEP51690 589 aa11.7□□□□□ -0.54
SLIRP-206ENST00000556375 RAD51Q06609 339 aa11.7□□□□□ -0.54
SLIRP-206ENST00000556375 IL10RBQ08334 325 aa11.7□□□□□ -0.54
SLIRP-206ENST00000556375 MYLK3Q32MK0 819 aa11.7□□□□□ -0.54
SLIRP-206ENST00000556375 SETMARQ53H47 684 aaPredicted RBP11.7□□□□□ -0.54
SLIRP-206ENST00000556375 ZNF805Q5CZA5 627 aa11.7□□□□□ -0.54
SLIRP-206ENST00000556375 PPM1JQ5JR12 505 aa11.7□□□□□ -0.54
SLIRP-206ENST00000556375 NAPEPLDQ6IQ20 393 aa11.7□□□□□ -0.54
SLIRP-206ENST00000556375 ADAT2Q7Z6V5 191 aaKnown RBP11.7□□□□□ -0.54
SLIRP-206ENST00000556375 PRPF39Q86UA1 669 aaKnown RBP11.7□□□□□ -0.54
SLIRP-206ENST00000556375 CPNE8Q86YQ8 564 aa11.7□□□□□ -0.54
SLIRP-206ENST00000556375 OR2I1PQ8NGU4 316 aa11.7□□□□□ -0.54
SLIRP-206ENST00000556375 SLC35G2Q8TBE7 412 aa11.7□□□□□ -0.54
SLIRP-206ENST00000556375 VOPP1Q96AW1 172 aa11.7□□□□□ -0.54
SLIRP-206ENST00000556375 ZNF670Q9BS34 389 aa11.7□□□□□ -0.54
SLIRP-206ENST00000556375 SP110Q9HB58 689 aa11.7□□□□□ -0.54
SLIRP-206ENST00000556375 ETNK2Q9NVF9 386 aa11.7□□□□□ -0.54
SLIRP-206ENST00000556375 IPO11Q9UI26 975 aaKnown RBP11.7□□□□□ -0.54
SLIRP-206ENST00000556375 MFHAS1Q9Y4C4 1052 aa11.7□□□□□ -0.54
SLIRP-206ENST00000556375 CABIN1Q9Y6J0 2220 aa11.7□□□□□ -0.54
SLIRP-206ENST00000556375 A0A1W2PQU0 124 aa11.69□□□□□ -0.54
SLIRP-206ENST00000556375 VILLO15195 856 aa11.69□□□□□ -0.54
SLIRP-206ENST00000556375 AP1G1O43747 822 aa11.69□□□□□ -0.54
SLIRP-206ENST00000556375 RNGTTO60942 597 aaKnown RBP11.69□□□□□ -0.54
SLIRP-206ENST00000556375 LCA5LO95447 670 aa11.69□□□□□ -0.54
SLIRP-206ENST00000556375 UGT2B4P06133 528 aa11.69□□□□□ -0.54
SLIRP-206ENST00000556375 ZNF883P0CG24 379 aa11.69□□□□□ -0.54
SLIRP-206ENST00000556375 CSRP1P21291 193 aaKnown RBP11.69□□□□□ -0.54
SLIRP-206ENST00000556375 FECHP22830 423 aa11.69□□□□□ -0.54
SLIRP-206ENST00000556375 CD38P28907 300 aa11.69□□□□□ -0.54
SLIRP-206ENST00000556375 MAT2AP31153 395 aaKnown RBP11.69□□□□□ -0.54
SLIRP-206ENST00000556375 ARHGAP25P42331 645 aa11.69□□□□□ -0.54
SLIRP-206ENST00000556375 TAS2R40P59535 323 aa11.69□□□□□ -0.54
SLIRP-206ENST00000556375 SLC14A1Q13336 389 aa11.69□□□□□ -0.54
SLIRP-206ENST00000556375 DPYSL3Q14195 570 aa11.69□□□□□ -0.54
SLIRP-206ENST00000556375 MESDQ14696 234 aa11.69□□□□□ -0.54
SLIRP-206ENST00000556375 RFTN1Q14699 578 aaPredicted RBP11.69□□□□□ -0.54
SLIRP-206ENST00000556375 PDK2Q15119 407 aa11.69□□□□□ -0.54
SLIRP-206ENST00000556375 TCEAL1Q15170 157 aa11.69□□□□□ -0.54
SLIRP-206ENST00000556375 CYTH1Q15438 398 aa11.69□□□□□ -0.54
SLIRP-206ENST00000556375 KIF19Q2TAC6 998 aa11.69□□□□□ -0.54
SLIRP-206ENST00000556375 TMCO4Q5TGY1 634 aa11.69□□□□□ -0.54
SLIRP-206ENST00000556375 FBXL19Q6PCT2 694 aa11.69□□□□□ -0.54
SLIRP-206ENST00000556375 LAYNQ6UX15 382 aa11.69□□□□□ -0.54
SLIRP-206ENST00000556375 ARHGAP36Q6ZRI8 547 aa11.69□□□□□ -0.54
SLIRP-206ENST00000556375 ZSCAN30Q86W11 494 aa11.69□□□□□ -0.54
SLIRP-206ENST00000556375 HORMAD1Q86X24 394 aa11.69□□□□□ -0.54
SLIRP-206ENST00000556375 CCDC170Q8IYT3 715 aa11.69□□□□□ -0.54
SLIRP-206ENST00000556375 ATPAF2Q8N5M1 289 aa11.69□□□□□ -0.54
SLIRP-206ENST00000556375 NETO2Q8NC67 525 aa11.69□□□□□ -0.54
SLIRP-206ENST00000556375 RAB7BQ96AH8 199 aa11.69□□□□□ -0.54
SLIRP-206ENST00000556375 SKA1Q96BD8 255 aa11.69□□□□□ -0.54
SLIRP-206ENST00000556375 SERAC1Q96JX3 654 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms