RNA–Protein interactions for RNA: ENST00000556353.1

PRPF39-209, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 687 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-209ENST00000556353 TRAF2Q12933 501 aa5.42□□□□□ -1.54
PRPF39-209ENST00000556353 GXYLT1Q4G148 440 aa5.42□□□□□ -1.54
PRPF39-209ENST00000556353 DGAT2L7PQ6IED9 249 aa5.42□□□□□ -1.54
PRPF39-209ENST00000556353 ATG16L2Q8NAA4 619 aa5.42□□□□□ -1.54
PRPF39-209ENST00000556353 SCAMP5Q8TAC9 235 aa5.42□□□□□ -1.54
PRPF39-209ENST00000556353 CEP76Q8TAP6 659 aa5.42□□□□□ -1.54
PRPF39-209ENST00000556353 SLC35F5Q8WV83 523 aa5.42□□□□□ -1.54
PRPF39-209ENST00000556353 FRG2BQ96QU4 278 aa5.42□□□□□ -1.54
PRPF39-209ENST00000556353 IFT27Q9BW83 186 aa5.42□□□□□ -1.54
PRPF39-209ENST00000556353 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.42□□□□□ -1.54
PRPF39-209ENST00000556353 PABPC3Q9H361 631 aaKnown RBP5.42□□□□□ -1.54
PRPF39-209ENST00000556353 PLEKHB1Q9UF11 243 aaPredicted RBP5.42□□□□□ -1.54
PRPF39-209ENST00000556353 CDH22Q9UJ99 828 aa5.42□□□□□ -1.54
PRPF39-209ENST00000556353 PCDHGB1Q9Y5G3 927 aa5.42□□□□□ -1.54
PRPF39-209ENST00000556353 DOCK7Q96N67 2140 aa5.42□□□□□ -1.54
PRPF39-209ENST00000556353 ADGRB3O60242 1522 aa5.42□□□□□ -1.54
PRPF39-209ENST00000556353 NWD1Q149M9 1564 aa5.42□□□□□ -1.54
PRPF39-209ENST00000556353 KIF15Q9NS87 1388 aa5.42□□□□□ -1.54
PRPF39-209ENST00000556353 NPHP4O75161 1426 aaPredicted RBP5.41□□□□□ -1.54
PRPF39-209ENST00000556353 ADGRL2O95490 1459 aa5.41□□□□□ -1.54
PRPF39-209ENST00000556353 SETSIPP0DME0 302 aa5.41□□□□□ -1.54
PRPF39-209ENST00000556353 FCGR2AP12318 317 aa5.41□□□□□ -1.54
PRPF39-209ENST00000556353 MT3P25713 68 aa5.41□□□□□ -1.54
PRPF39-209ENST00000556353 SERPINF1P36955 418 aa5.41□□□□□ -1.54
PRPF39-209ENST00000556353 KRTAP10-7P60409 375 aaPredicted RBP5.41□□□□□ -1.54
PRPF39-209ENST00000556353 RPL36AP83881 106 aaKnown RBP5.41□□□□□ -1.54
PRPF39-209ENST00000556353 GALNT1Q10472 559 aaPredicted RBP5.41□□□□□ -1.54
PRPF39-209ENST00000556353 HYAL1Q12794 435 aa5.41□□□□□ -1.54
PRPF39-209ENST00000556353 PKP1Q13835 747 aa5.41□□□□□ -1.54
PRPF39-209ENST00000556353 PUM3Q15397 648 aaKnown RBP5.41□□□□□ -1.54
PRPF39-209ENST00000556353 MAP9Q49MG5 647 aa5.41□□□□□ -1.54
PRPF39-209ENST00000556353 TDRD12Q587J7 1177 aaKnown RBP5.41□□□□□ -1.54
PRPF39-209ENST00000556353 C8orf82Q6P1X6 216 aaPredicted RBP5.41□□□□□ -1.54
PRPF39-209ENST00000556353 PALB2Q86YC2 1186 aa5.41□□□□□ -1.54
PRPF39-209ENST00000556353 SCN4BQ8IWT1 228 aa5.41□□□□□ -1.54
PRPF39-209ENST00000556353 C2CD4CQ8TF44 421 aa5.41□□□□□ -1.54
PRPF39-209ENST00000556353 FAR1Q8WVX9 515 aa5.41□□□□□ -1.54
PRPF39-209ENST00000556353 CADM1Q9BY67 442 aaKnown RBP5.41□□□□□ -1.54
PRPF39-209ENST00000556353 WDR12Q9GZL7 423 aaKnown RBP5.41□□□□□ -1.54
PRPF39-209ENST00000556353 RMI1Q9H9A7 625 aa5.41□□□□□ -1.54
PRPF39-209ENST00000556353 TMLHEQ9NVH6 421 aa5.41□□□□□ -1.54
PRPF39-209ENST00000556353 IL36RNQ9UBH0 155 aa5.41□□□□□ -1.54
PRPF39-209ENST00000556353 RCE1Q9Y256 329 aa5.41□□□□□ -1.54
PRPF39-209ENST00000556353 TMEM131LA2VDJ0 1609 aa5.41□□□□□ -1.54
PRPF39-209ENST00000556353 DISP3Q9P2K9 1392 aa5.41□□□□□ -1.54
PRPF39-209ENST00000556353 ARHGAP31Q2M1Z3 1444 aa5.4□□□□□ -1.54
PRPF39-209ENST00000556353 SCAF11Q99590 1463 aaKnown RBP5.4□□□□□ -1.54
PRPF39-209ENST00000556353 C17orf102A2RUQ5 167 aa5.4□□□□□ -1.54
PRPF39-209ENST00000556353 IFITM10A6NMD0 228 aa5.4□□□□□ -1.54
PRPF39-209ENST00000556353 SYN3O14994 580 aa5.4□□□□□ -1.54
PRPF39-209ENST00000556353 ASAP2O43150 1006 aa5.4□□□□□ -1.54
PRPF39-209ENST00000556353 CLCNKBP51801 687 aa5.4□□□□□ -1.54
PRPF39-209ENST00000556353 PNLIPRP1P54315 467 aa5.4□□□□□ -1.54
PRPF39-209ENST00000556353 CDH12P55289 794 aa5.4□□□□□ -1.54
PRPF39-209ENST00000556353 ICA1Q05084 483 aa5.4□□□□□ -1.54
PRPF39-209ENST00000556353 DCTN1Q14203 1278 aa5.4□□□□□ -1.54
PRPF39-209ENST00000556353 ZDHHC23Q8IYP9 409 aa5.4□□□□□ -1.54
PRPF39-209ENST00000556353 PTGR2Q8N8N7 351 aaPredicted RBP5.4□□□□□ -1.54
PRPF39-209ENST00000556353 OR14A16Q8NHC5 309 aa5.4□□□□□ -1.54
PRPF39-209ENST00000556353 LMO3Q8TAP4 145 aa5.4□□□□□ -1.54
PRPF39-209ENST00000556353 HDAC7Q8WUI4 952 aa5.4□□□□□ -1.54
PRPF39-209ENST00000556353 CLPBQ9H078 707 aa5.4□□□□□ -1.54
PRPF39-209ENST00000556353 ABHD16BQ9H3Z7 469 aa5.4□□□□□ -1.54
PRPF39-209ENST00000556353 TXLNGQ9NUQ3 528 aa5.4□□□□□ -1.54
PRPF39-209ENST00000556353 LRFN1Q9P244 771 aa5.4□□□□□ -1.54
PRPF39-209ENST00000556353 IQGAP3Q86VI3 1631 aa5.4□□□□□ -1.55
PRPF39-209ENST00000556353 NRXN3Q9Y4C0 1643 aa5.4□□□□□ -1.55
PRPF39-209ENST00000556353 RNMTO43148 476 aaKnown RBP5.39□□□□□ -1.55
PRPF39-209ENST00000556353 LDB2O43679 373 aa5.39□□□□□ -1.55
PRPF39-209ENST00000556353 KRT86O43790 486 aa5.39□□□□□ -1.55
PRPF39-209ENST00000556353 FCGR1AP12314 374 aa5.39□□□□□ -1.55
PRPF39-209ENST00000556353 CYP4B1P13584 511 aa5.39□□□□□ -1.55
PRPF39-209ENST00000556353 ENO3P13929 434 aaPredicted RBP5.39□□□□□ -1.55
PRPF39-209ENST00000556353 GNLYP22749 145 aa5.39□□□□□ -1.55
PRPF39-209ENST00000556353 KRT81Q14533 505 aa5.39□□□□□ -1.55
PRPF39-209ENST00000556353 HNF4GQ14541 408 aa5.39□□□□□ -1.55
PRPF39-209ENST00000556353 SYTL3Q4VX76 610 aa5.39□□□□□ -1.55
PRPF39-209ENST00000556353 TMEM268Q5VZI3 342 aa5.39□□□□□ -1.55
PRPF39-209ENST00000556353 TOGARAM2Q6ZUX3 1019 aa5.39□□□□□ -1.55
PRPF39-209ENST00000556353 GALNT7Q86SF2 657 aa5.39□□□□□ -1.55
PRPF39-209ENST00000556353 NR2C2APQ86WQ0 139 aa5.39□□□□□ -1.55
PRPF39-209ENST00000556353 GFM1Q96RP9 751 aaKnown RBP5.39□□□□□ -1.55
PRPF39-209ENST00000556353 RMDN3Q96TC7 470 aa5.39□□□□□ -1.55
PRPF39-209ENST00000556353 DACT1Q9NYF0 836 aa5.39□□□□□ -1.55
PRPF39-209ENST00000556353 SEL1LQ9UBV2 794 aa5.39□□□□□ -1.55
PRPF39-209ENST00000556353 KLQ9UEF7 1012 aa5.39□□□□□ -1.55
PRPF39-209ENST00000556353 OSGIN2Q9Y236 505 aa5.39□□□□□ -1.55
PRPF39-209ENST00000556353 SRPRBQ9Y5M8 271 aaKnown RBP5.39□□□□□ -1.55
PRPF39-209ENST00000556353 RAI2Q9Y5P3 530 aa5.39□□□□□ -1.55
PRPF39-209ENST00000556353 ROBO1Q9Y6N7 1651 aa5.39□□□□□ -1.55
PRPF39-209ENST00000556353 SETD1AO15047 1707 aaKnown RBP5.39□□□□□ -1.55
PRPF39-209ENST00000556353 SPHKAPQ2M3C7 1700 aa5.39□□□□□ -1.55
PRPF39-209ENST00000556353 MST1RQ04912 1400 aa5.39□□□□□ -1.55
PRPF39-209ENST00000556353 BTBD18B2RXH4 712 aa5.38□□□□□ -1.55
PRPF39-209ENST00000556353 ACKR2O00590 384 aa5.38□□□□□ -1.55
PRPF39-209ENST00000556353 HSPB6O14558 160 aa5.38□□□□□ -1.55
PRPF39-209ENST00000556353 DDAH2O95865 285 aa5.38□□□□□ -1.55
PRPF39-209ENST00000556353 CYP21A2P08686 494 aa5.38□□□□□ -1.55
PRPF39-209ENST00000556353 LYL1P12980 280 aa5.38□□□□□ -1.55
PRPF39-209ENST00000556353 CHN1P15882 459 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms