RNA–Protein interactions for RNA: ENST00000556256.1

SCFD1-218, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-218ENST00000556256 GALNT1Q10472 559 aaPredicted RBP3.42□□□□□ -1.86
SCFD1-218ENST00000556256 DHX8Q14562 1220 aaKnown RBP3.42□□□□□ -1.86
SCFD1-218ENST00000556256 SYTL3Q4VX76 610 aa3.42□□□□□ -1.86
SCFD1-218ENST00000556256 BSPRYQ5W0U4 402 aa3.42□□□□□ -1.86
SCFD1-218ENST00000556256 TBC1D3GQ6DHY5 549 aa3.42□□□□□ -1.86
SCFD1-218ENST00000556256 TBC1D3CQ6IPX1 549 aa3.42□□□□□ -1.86
SCFD1-218ENST00000556256 TRABD2AQ86V40 505 aa3.42□□□□□ -1.86
SCFD1-218ENST00000556256 SYTL1Q8IYJ3 562 aa3.42□□□□□ -1.86
SCFD1-218ENST00000556256 TBC1D3Q8IZP1 549 aaPredicted RBP3.42□□□□□ -1.86
SCFD1-218ENST00000556256 CIARTQ8N365 385 aaPredicted RBP3.42□□□□□ -1.86
SCFD1-218ENST00000556256 ZNF385AQ96PM9 386 aaKnown RBP3.42□□□□□ -1.86
SCFD1-218ENST00000556256 CCDC134Q9H6E4 229 aa3.42□□□□□ -1.86
SCFD1-218ENST00000556256 NECTIN3Q9NQS3 549 aa3.42□□□□□ -1.86
SCFD1-218ENST00000556256 ZFP57Q9NU63 452 aa3.42□□□□□ -1.86
SCFD1-218ENST00000556256 DDX43Q9NXZ2 648 aaKnown RBP3.42□□□□□ -1.86
SCFD1-218ENST00000556256 CA14Q9ULX7 337 aa3.42□□□□□ -1.86
SCFD1-218ENST00000556256 CNTN6Q9UQ52 1028 aa3.42□□□□□ -1.86
SCFD1-218ENST00000556256 FAM72CH0Y354 149 aa3.41□□□□□ -1.86
SCFD1-218ENST00000556256 FFAR2O15552 330 aa3.41□□□□□ -1.86
SCFD1-218ENST00000556256 KIF1CO43896 1103 aaKnown RBP3.41□□□□□ -1.86
SCFD1-218ENST00000556256 FGF17O60258 216 aa3.41□□□□□ -1.86
SCFD1-218ENST00000556256 FGF5P12034 268 aa3.41□□□□□ -1.86
SCFD1-218ENST00000556256 KCNA5P22460 613 aa3.41□□□□□ -1.86
SCFD1-218ENST00000556256 PRKCHP24723 683 aa3.41□□□□□ -1.86
SCFD1-218ENST00000556256 PDIA3P30101 505 aaKnown RBP3.41□□□□□ -1.86
SCFD1-218ENST00000556256 RFC1P35251 1148 aaPredicted RBP3.41□□□□□ -1.86
SCFD1-218ENST00000556256 TIMP3P35625 211 aa3.41□□□□□ -1.86
SCFD1-218ENST00000556256 DHX34Q14147 1143 aaKnown RBP3.41□□□□□ -1.86
SCFD1-218ENST00000556256 STARD3Q14849 445 aa3.41□□□□□ -1.86
SCFD1-218ENST00000556256 RAB30Q15771 203 aa3.41□□□□□ -1.86
SCFD1-218ENST00000556256 ACCSLQ4AC99 568 aa3.41□□□□□ -1.86
SCFD1-218ENST00000556256 LCE3EQ5T5B0 92 aa3.41□□□□□ -1.86
SCFD1-218ENST00000556256 FAM72AQ5TYM5 149 aa3.41□□□□□ -1.86
SCFD1-218ENST00000556256 FAM72DQ6L9T8 149 aa3.41□□□□□ -1.86
SCFD1-218ENST00000556256 SH2D6Q7Z4S9 175 aa3.41□□□□□ -1.86
SCFD1-218ENST00000556256 SERPINA11Q86U17 422 aa3.41□□□□□ -1.86
SCFD1-218ENST00000556256 FAM72BQ86X60 149 aa3.41□□□□□ -1.86
SCFD1-218ENST00000556256 MYLK4Q86YV6 388 aaPredicted RBP3.41□□□□□ -1.86
SCFD1-218ENST00000556256 NKAPQ8N5F7 415 aaKnown RBP3.41□□□□□ -1.86
SCFD1-218ENST00000556256 KBTBD3Q8NAB2 608 aa3.41□□□□□ -1.86
SCFD1-218ENST00000556256 RFWD2Q8NHY2 731 aa3.41□□□□□ -1.86
SCFD1-218ENST00000556256 TMEM18Q96B42 140 aa3.41□□□□□ -1.86
SCFD1-218ENST00000556256 MYH16Q9H6N6 1097 aa3.41□□□□□ -1.86
SCFD1-218ENST00000556256 SLC39A10Q9ULF5 831 aa3.41□□□□□ -1.86
SCFD1-218ENST00000556256 MST1RQ04912 1400 aa3.41□□□□□ -1.86
SCFD1-218ENST00000556256 ARID4BQ4LE39 1312 aaPredicted RBP3.41□□□□□ -1.86
SCFD1-218ENST00000556256 DDTLA6NHG4 134 aaPredicted RBP3.4□□□□□ -1.87
SCFD1-218ENST00000556256 HNRNPCL2B2RXH8 293 aa3.4□□□□□ -1.87
SCFD1-218ENST00000556256 RNMTO43148 476 aaKnown RBP3.4□□□□□ -1.87
SCFD1-218ENST00000556256 PMS2P2O95744 297 aa3.4□□□□□ -1.87
SCFD1-218ENST00000556256 CH25HO95992 272 aa3.4□□□□□ -1.87
SCFD1-218ENST00000556256 HLA-DQA2P01906 255 aa3.4□□□□□ -1.87
SCFD1-218ENST00000556256 ANXA6P08133 673 aa3.4□□□□□ -1.87
SCFD1-218ENST00000556256 NLRP5P59047 1200 aa3.4□□□□□ -1.87
SCFD1-218ENST00000556256 PMP22Q01453 160 aa3.4□□□□□ -1.87
SCFD1-218ENST00000556256 ICA1Q05084 483 aa3.4□□□□□ -1.87
SCFD1-218ENST00000556256 PUM3Q15397 648 aaKnown RBP3.4□□□□□ -1.87
SCFD1-218ENST00000556256 ZACNQ401N2 412 aa3.4□□□□□ -1.87
SCFD1-218ENST00000556256 GORABQ5T7V8 394 aa3.4□□□□□ -1.87
SCFD1-218ENST00000556256 SLC26A9Q7LBE3 791 aa3.4□□□□□ -1.87
SCFD1-218ENST00000556256 TRIM74Q86UV6 250 aa3.4□□□□□ -1.87
SCFD1-218ENST00000556256 TRIM73Q86UV7 250 aa3.4□□□□□ -1.87
SCFD1-218ENST00000556256 CACNA2D3Q8IZS8 1091 aa3.4□□□□□ -1.87
SCFD1-218ENST00000556256 RBFAQ8N0V3 343 aa3.4□□□□□ -1.87
SCFD1-218ENST00000556256 ZNF527Q8NB42 609 aa3.4□□□□□ -1.87
SCFD1-218ENST00000556256 GPT2Q8TD30 523 aa3.4□□□□□ -1.87
SCFD1-218ENST00000556256 RBM4Q9BWF3 364 aaKnown RBP3.4□□□□□ -1.87
SCFD1-218ENST00000556256 TMEM120AQ9BXJ8 343 aa3.4□□□□□ -1.87
SCFD1-218ENST00000556256 CHMP4AQ9BY43 222 aa3.4□□□□□ -1.87
SCFD1-218ENST00000556256 LHPPQ9H008 270 aa3.4□□□□□ -1.87
SCFD1-218ENST00000556256 ZNF334Q9HCZ1 680 aaPredicted RBP3.4□□□□□ -1.87
SCFD1-218ENST00000556256 LRFN1Q9P244 771 aa3.4□□□□□ -1.87
SCFD1-218ENST00000556256 CEP83Q9Y592 693 aa3.4□□□□□ -1.87
SCFD1-218ENST00000556256 C11orf97A0A1B0GVM6 126 aaPredicted RBP3.39□□□□□ -1.87
SCFD1-218ENST00000556256 LGALS16A8MUM7 142 aa3.39□□□□□ -1.87
SCFD1-218ENST00000556256 SYT5O00445 386 aa3.39□□□□□ -1.87
SCFD1-218ENST00000556256 PCDH17O14917 1159 aa3.39□□□□□ -1.87
SCFD1-218ENST00000556256 ZNF500O60304 480 aaPredicted RBP3.39□□□□□ -1.87
SCFD1-218ENST00000556256 SKAP2O75563 359 aaPredicted RBP3.39□□□□□ -1.87
SCFD1-218ENST00000556256 RPP40O75818 363 aaKnown RBP3.39□□□□□ -1.87
SCFD1-218ENST00000556256 CSTBP04080 98 aaKnown RBP3.39□□□□□ -1.87
SCFD1-218ENST00000556256 ATP1A1P05023 1023 aaKnown RBP3.39□□□□□ -1.87
SCFD1-218ENST00000556256 MMP3P08254 477 aa3.39□□□□□ -1.87
SCFD1-218ENST00000556256 VEGFAP15692 232 aaPredicted RBP3.39□□□□□ -1.87
SCFD1-218ENST00000556256 SSTR2P30874 369 aa3.39□□□□□ -1.87
SCFD1-218ENST00000556256 NR0B1P51843 470 aaKnown RBP3.39□□□□□ -1.87
SCFD1-218ENST00000556256 ADORA2A-AS1P86434 159 aa3.39□□□□□ -1.87
SCFD1-218ENST00000556256 CYP4A11Q02928 519 aa3.39□□□□□ -1.87
SCFD1-218ENST00000556256 FOXO1Q12778 655 aa3.39□□□□□ -1.87
SCFD1-218ENST00000556256 TRIM14Q14142 442 aa3.39□□□□□ -1.87
SCFD1-218ENST00000556256 PTK2BQ14289 1009 aa3.39□□□□□ -1.87
SCFD1-218ENST00000556256 SPARCL1Q14515 664 aa3.39□□□□□ -1.87
SCFD1-218ENST00000556256 PFKFB4Q16877 469 aa3.39□□□□□ -1.87
SCFD1-218ENST00000556256 TMEM30BQ3MIR4 351 aa3.39□□□□□ -1.87
SCFD1-218ENST00000556256 KRTAP13-3Q3SY46 172 aa3.39□□□□□ -1.87
SCFD1-218ENST00000556256 ZNF569Q5MCW4 686 aa3.39□□□□□ -1.87
SCFD1-218ENST00000556256 ARL6IP4Q66PJ3 421 aaKnown RBP3.39□□□□□ -1.87
SCFD1-218ENST00000556256 PGBD2Q6P3X8 592 aa3.39□□□□□ -1.87
SCFD1-218ENST00000556256 PATL1Q86TB9 770 aaKnown RBP3.39□□□□□ -1.87
SCFD1-218ENST00000556256 ENDOVQ8N8Q3 282 aaKnown RBP3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms