RNA–Protein interactions for RNA: ENST00000555648.1

SNX6-205, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-205ENST00000555648 CLDN2P57739 230 aa15.68■□□□□ 0.1
SNX6-205ENST00000555648 YBEYP58557 167 aaPredicted RBP15.68■□□□□ 0.1
SNX6-205ENST00000555648 RHOAP61586 193 aa15.68■□□□□ 0.1
SNX6-205ENST00000555648 ILKQ13418 452 aa15.68■□□□□ 0.1
SNX6-205ENST00000555648 ASIC2Q16515 512 aa15.68■□□□□ 0.1
SNX6-205ENST00000555648 MYLK3Q32MK0 819 aa15.68■□□□□ 0.1
SNX6-205ENST00000555648 Q6ZSR6 202 aa15.68■□□□□ 0.1
SNX6-205ENST00000555648 PARS2Q7L3T8 475 aaKnown RBP15.68■□□□□ 0.1
SNX6-205ENST00000555648 TTC7BQ86TV6 843 aa15.68■□□□□ 0.1
SNX6-205ENST00000555648 PYROXD2Q8N2H3 581 aa15.68■□□□□ 0.1
SNX6-205ENST00000555648 OR13H1Q8NG92 308 aa15.68■□□□□ 0.1
SNX6-205ENST00000555648 NCAPGQ9BPX3 1015 aa15.68■□□□□ 0.1
SNX6-205ENST00000555648 MAGEB5Q9BZ81 275 aa15.68■□□□□ 0.1
SNX6-205ENST00000555648 PARVAQ9NVD7 372 aa15.68■□□□□ 0.1
SNX6-205ENST00000555648 EVA1BQ9NVM1 165 aa15.68■□□□□ 0.1
SNX6-205ENST00000555648 ZFR2Q9UPR6 939 aaKnown RBP15.68■□□□□ 0.1
SNX6-205ENST00000555648 HS3ST3A1Q9Y663 406 aa15.68■□□□□ 0.1
SNX6-205ENST00000555648 KNL1Q8NG31 2342 aa15.68■□□□□ 0.1
SNX6-205ENST00000555648 LAMA1P25391 3075 aa15.68■□□□□ 0.1
SNX6-205ENST00000555648 NEMP2A6NFY4 417 aa15.67■□□□□ 0.1
SNX6-205ENST00000555648 H3BM21 787 aa15.67■□□□□ 0.1
SNX6-205ENST00000555648 RNF103O00237 685 aa15.67■□□□□ 0.1
SNX6-205ENST00000555648 FGF10O15520 208 aaPredicted RBP15.67■□□□□ 0.1
SNX6-205ENST00000555648 DAPK3O43293 454 aa15.67■□□□□ 0.1
SNX6-205ENST00000555648 TMCC1O94876 653 aa15.67■□□□□ 0.1
SNX6-205ENST00000555648 PSMA2P25787 234 aa15.67■□□□□ 0.1
SNX6-205ENST00000555648 GKP32189 559 aa15.67■□□□□ 0.1
SNX6-205ENST00000555648 RABIFP47224 123 aa15.67■□□□□ 0.1
SNX6-205ENST00000555648 ACADVLP49748 655 aa15.67■□□□□ 0.1
SNX6-205ENST00000555648 TPI1P60174 286 aa15.67■□□□□ 0.1
SNX6-205ENST00000555648 RPL7AP62424 266 aaKnown RBP15.67■□□□□ 0.1
SNX6-205ENST00000555648 CYP4F3Q08477 520 aa15.67■□□□□ 0.1
SNX6-205ENST00000555648 PARP15Q460N3 678 aa15.67■□□□□ 0.1
SNX6-205ENST00000555648 TMEM259Q4ZIN3 620 aa15.67■□□□□ 0.1
SNX6-205ENST00000555648 ARTNQ5T4W7 220 aa15.67■□□□□ 0.1
SNX6-205ENST00000555648 CFAP58Q5T655 872 aa15.67■□□□□ 0.1
SNX6-205ENST00000555648 ATXN7L2Q5T6C5 722 aaPredicted RBP15.67■□□□□ 0.1
SNX6-205ENST00000555648 SFMBT2Q5VUG0 894 aa15.67■□□□□ 0.1
SNX6-205ENST00000555648 GDPD4Q6W3E5 623 aa15.67■□□□□ 0.1
SNX6-205ENST00000555648 APTXQ7Z2E3 356 aaKnown RBP15.67■□□□□ 0.1
SNX6-205ENST00000555648 TMC6Q7Z403 805 aa15.67■□□□□ 0.1
SNX6-205ENST00000555648 MARCH9Q86YJ5 346 aa15.67■□□□□ 0.1
SNX6-205ENST00000555648 VCPIP1Q96JH7 1222 aa15.67■□□□□ 0.1
SNX6-205ENST00000555648 KLHL32Q96NJ5 620 aa15.67■□□□□ 0.1
SNX6-205ENST00000555648 BPIFA3Q9BQP9 254 aa15.67■□□□□ 0.1
SNX6-205ENST00000555648 C1QTNF7Q9BXJ2 289 aa15.67■□□□□ 0.1
SNX6-205ENST00000555648 DNAJC28Q9NX36 388 aa15.67■□□□□ 0.1
SNX6-205ENST00000555648 FZD10Q9ULW2 581 aa15.67■□□□□ 0.1
SNX6-205ENST00000555648 LHX6Q9UPM6 363 aa15.67■□□□□ 0.1
SNX6-205ENST00000555648 CABIN1Q9Y6J0 2220 aa15.66■□□□□ 0.1
SNX6-205ENST00000555648 IGLON5A6NGN9 336 aa15.66■□□□□ 0.1
SNX6-205ENST00000555648 RASA4BC9J798 803 aa15.66■□□□□ 0.1
SNX6-205ENST00000555648 TAF4O00268 1085 aa15.66■□□□□ 0.1
SNX6-205ENST00000555648 FFAR2O15552 330 aa15.66■□□□□ 0.1
SNX6-205ENST00000555648 TEX33O43247 280 aa15.66■□□□□ 0.1
SNX6-205ENST00000555648 RASA4O43374 803 aa15.66■□□□□ 0.1
SNX6-205ENST00000555648 RNF8O76064 485 aa15.66■□□□□ 0.1
SNX6-205ENST00000555648 CD160O95971 181 aa15.66■□□□□ 0.1
SNX6-205ENST00000555648 SERPINC1P01008 464 aa15.66■□□□□ 0.1
SNX6-205ENST00000555648 DGKAP23743 735 aa15.66■□□□□ 0.1
SNX6-205ENST00000555648 HTR7P34969 479 aa15.66■□□□□ 0.1
SNX6-205ENST00000555648 ZNF165P49910 485 aa15.66■□□□□ 0.1
SNX6-205ENST00000555648 HNRNPKP61978 463 aaKnown RBP eCLIP15.66■□□□□ 0.14e-8■□□□□ 11.2
SNX6-205ENST00000555648 TPM4P67936 248 aa15.66■□□□□ 0.1
SNX6-205ENST00000555648 ZNF211Q13398 564 aaPredicted RBP15.66■□□□□ 0.1
SNX6-205ENST00000555648 INO80DQ53TQ3 878 aaPredicted RBP15.66■□□□□ 0.1
SNX6-205ENST00000555648 HES3Q5TGS1 186 aa15.66■□□□□ 0.1
SNX6-205ENST00000555648 CAVIN1Q6NZI2 390 aaKnown RBP15.66■□□□□ 0.1
SNX6-205ENST00000555648 KYAT3Q6YP21 454 aaKnown RBP15.66■□□□□ 0.1
SNX6-205ENST00000555648 GCNT7Q6ZNI0 430 aa15.66■□□□□ 0.1
SNX6-205ENST00000555648 IRF2BP2Q7Z5L9 587 aa15.66■□□□□ 0.1
SNX6-205ENST00000555648 ABI3BPQ7Z7G0 1075 aa15.66■□□□□ 0.1
SNX6-205ENST00000555648 PAF1Q8N7H5 531 aa15.66■□□□□ 0.1
SNX6-205ENST00000555648 CXorf40AQ8TE69 158 aa15.66■□□□□ 0.1
SNX6-205ENST00000555648 IFT43Q96FT9 208 aa15.66■□□□□ 0.1
SNX6-205ENST00000555648 HSD3B7Q9H2F3 369 aa15.66■□□□□ 0.1
SNX6-205ENST00000555648 RTN4Q9NQC3 1192 aaKnown RBP15.66■□□□□ 0.1
SNX6-205ENST00000555648 TMEM63CQ9P1W3 806 aa15.66■□□□□ 0.1
SNX6-205ENST00000555648 TCRBV5S1A1TA0A578 114 aa15.65■□□□□ 0.1
SNX6-205ENST00000555648 LRRC53A6NM62 1247 aa15.65■□□□□ 0.1
SNX6-205ENST00000555648 SIGLEC6O43699 453 aa15.65■□□□□ 0.1
SNX6-205ENST00000555648 PIAS2O75928 621 aa15.65■□□□□ 0.1
SNX6-205ENST00000555648 E2F1Q01094 437 aa15.65■□□□□ 0.1
SNX6-205ENST00000555648 MAMLD1Q13495 774 aa15.65■□□□□ 0.1
SNX6-205ENST00000555648 TSC1Q92574 1164 aa15.65■□□□□ 0.1
SNX6-205ENST00000555648 NXPE2Q96DL1 559 aa15.65■□□□□ 0.1
SNX6-205ENST00000555648 HMCESQ96FZ2 354 aa15.65■□□□□ 0.1
SNX6-205ENST00000555648 DUSP23Q9BVJ7 150 aa15.65■□□□□ 0.1
SNX6-205ENST00000555648 TTYH3Q9C0H2 523 aa15.65■□□□□ 0.1
SNX6-205ENST00000555648 DHX35Q9H5Z1 703 aaKnown RBP15.65■□□□□ 0.1
SNX6-205ENST00000555648 UBA2Q9UBT2 640 aaPredicted RBP15.65■□□□□ 0.1
SNX6-205ENST00000555648 RALYQ9UKM9 306 aaKnown RBP15.65■□□□□ 0.1
SNX6-205ENST00000555648 AP4E1Q9UPM8 1137 aa15.65■□□□□ 0.1
SNX6-205ENST00000555648 NEU3Q9UQ49 428 aa15.65■□□□□ 0.1
SNX6-205ENST00000555648 RAXQ9Y2V3 346 aa15.65■□□□□ 0.1
SNX6-205ENST00000555648 AK5Q9Y6K8 562 aa15.65■□□□□ 0.1
SNX6-205ENST00000555648 USP24Q9UPU5 2620 aa15.64■□□□□ 0.1
SNX6-205ENST00000555648 WASH4PA8MWX3 477 aa15.64■□□□□ 0.09
SNX6-205ENST00000555648 EIF3CLB5ME19 914 aaKnown RBP15.64■□□□□ 0.09
SNX6-205ENST00000555648 EEF2KO00418 725 aaKnown RBP15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms