RNA–Protein interactions for RNA: ENST00000555616.5

ACTN1-215, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 919 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-215ENST00000555616 KLHL11Q9NVR0 708 aa9.82□□□□□ -0.84
ACTN1-215ENST00000555616 DNAAF2Q9NVR5 837 aaKnown RBP9.82□□□□□ -0.84
ACTN1-215ENST00000555616 TMEM248Q9NWD8 314 aa9.82□□□□□ -0.84
ACTN1-215ENST00000555616 FBXL12Q9NXK8 326 aa9.82□□□□□ -0.84
ACTN1-215ENST00000555616 RCOR3Q9P2K3 495 aaPredicted RBP9.82□□□□□ -0.84
ACTN1-215ENST00000555616 OR12D3Q9UGF7 316 aa9.82□□□□□ -0.84
ACTN1-215ENST00000555616 CDC23Q9UJX2 597 aa9.82□□□□□ -0.84
ACTN1-215ENST00000555616 NCKAP1Q9Y2A7 1128 aa9.82□□□□□ -0.84
ACTN1-215ENST00000555616 A0A1W2PP55 124 aa9.81□□□□□ -0.84
ACTN1-215ENST00000555616 UPK3BL1B0FP48 263 aa9.81□□□□□ -0.84
ACTN1-215ENST00000555616 UPK3BL2E5RIL1 263 aa9.81□□□□□ -0.84
ACTN1-215ENST00000555616 FAM72CH0Y354 149 aa9.81□□□□□ -0.84
ACTN1-215ENST00000555616 MCF2LO15068 1137 aa9.81□□□□□ -0.84
ACTN1-215ENST00000555616 BCAT2O15382 392 aaPredicted RBP9.81□□□□□ -0.84
ACTN1-215ENST00000555616 SLC7A4O43246 635 aa9.81□□□□□ -0.84
ACTN1-215ENST00000555616 GJB3O75712 270 aa9.81□□□□□ -0.84
ACTN1-215ENST00000555616 ZMPSTE24O75844 475 aa9.81□□□□□ -0.84
ACTN1-215ENST00000555616 LRIG2O94898 1065 aa9.81□□□□□ -0.84
ACTN1-215ENST00000555616 TJP3O95049 919 aa9.81□□□□□ -0.84
ACTN1-215ENST00000555616 KCNK5O95279 499 aa9.81□□□□□ -0.84
ACTN1-215ENST00000555616 MT-CO1P00395 513 aa9.81□□□□□ -0.84
ACTN1-215ENST00000555616 IL1BP01584 269 aa9.81□□□□□ -0.84
ACTN1-215ENST00000555616 IGHV4-34P06331 123 aa9.81□□□□□ -0.84
ACTN1-215ENST00000555616 SYPP08247 313 aa9.81□□□□□ -0.84
ACTN1-215ENST00000555616 ADRB1P08588 477 aa9.81□□□□□ -0.84
ACTN1-215ENST00000555616 PYGMP11217 842 aa9.81□□□□□ -0.84
ACTN1-215ENST00000555616 GOT1P17174 413 aa9.81□□□□□ -0.84
ACTN1-215ENST00000555616 CSRP1P21291 193 aaKnown RBP9.81□□□□□ -0.84
ACTN1-215ENST00000555616 KDELR1P24390 212 aa9.81□□□□□ -0.84
ACTN1-215ENST00000555616 CD27P26842 260 aa9.81□□□□□ -0.84
ACTN1-215ENST00000555616 L1CAMP32004 1257 aa9.81□□□□□ -0.84
ACTN1-215ENST00000555616 ETFBP38117 255 aa9.81□□□□□ -0.84
ACTN1-215ENST00000555616 SERPINH1P50454 418 aaKnown RBP9.81□□□□□ -0.84
ACTN1-215ENST00000555616 ATXN3P54252 364 aaPredicted RBP9.81□□□□□ -0.84
ACTN1-215ENST00000555616 ADPRHP54922 357 aa9.81□□□□□ -0.84
ACTN1-215ENST00000555616 CKAP4Q07065 602 aaKnown RBP9.81□□□□□ -0.84
ACTN1-215ENST00000555616 GRIK2Q13002 908 aa9.81□□□□□ -0.84
ACTN1-215ENST00000555616 SEMA3BQ13214 749 aa9.81□□□□□ -0.84
ACTN1-215ENST00000555616 ATP13A4Q4VNC1 1196 aa9.81□□□□□ -0.84
ACTN1-215ENST00000555616 FAM72AQ5TYM5 149 aa9.81□□□□□ -0.84
ACTN1-215ENST00000555616 KIAA0895LQ68EN5 471 aa9.81□□□□□ -0.84
ACTN1-215ENST00000555616 FAM72DQ6L9T8 149 aa9.81□□□□□ -0.84
ACTN1-215ENST00000555616 RETSATQ6NUM9 610 aa9.81□□□□□ -0.84
ACTN1-215ENST00000555616 C22orf39Q6P5X5 142 aa9.81□□□□□ -0.84
ACTN1-215ENST00000555616 SPOCD1Q6ZMY3 1216 aa9.81□□□□□ -0.84
ACTN1-215ENST00000555616 FAM72BQ86X60 149 aa9.81□□□□□ -0.84
ACTN1-215ENST00000555616 MINDY1Q8N5J2 469 aa9.81□□□□□ -0.84
ACTN1-215ENST00000555616 MNS1Q8NEH6 495 aa9.81□□□□□ -0.84
ACTN1-215ENST00000555616 OR7D4Q8NG98 312 aa9.81□□□□□ -0.84
ACTN1-215ENST00000555616 OR2T34Q8NGX1 318 aa9.81□□□□□ -0.84
ACTN1-215ENST00000555616 FAM71BQ8TC56 605 aa9.81□□□□□ -0.84
ACTN1-215ENST00000555616 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.81□□□□□ -0.84
ACTN1-215ENST00000555616 GANCQ8TET4 914 aa9.81□□□□□ -0.84
ACTN1-215ENST00000555616 COG1Q8WTW3 980 aa9.81□□□□□ -0.84
ACTN1-215ENST00000555616 MAIP1Q8WWC4 291 aa9.81□□□□□ -0.84
ACTN1-215ENST00000555616 RAPGEF5Q92565 580 aa9.81□□□□□ -0.84
ACTN1-215ENST00000555616 RNF25Q96BH1 459 aaPredicted RBP9.81□□□□□ -0.84
ACTN1-215ENST00000555616 TBC1D31Q96DN5 1066 aa9.81□□□□□ -0.84
ACTN1-215ENST00000555616 CAPZA3Q96KX2 299 aa9.81□□□□□ -0.84
ACTN1-215ENST00000555616 ORAI3Q9BRQ5 295 aa9.81□□□□□ -0.84
ACTN1-215ENST00000555616 ZNF670Q9BS34 389 aa9.81□□□□□ -0.84
ACTN1-215ENST00000555616 GTPBP2Q9BX10 602 aaKnown RBP9.81□□□□□ -0.84
ACTN1-215ENST00000555616 MAK16Q9BXY0 300 aaKnown RBP9.81□□□□□ -0.84
ACTN1-215ENST00000555616 OSBPL8Q9BZF1 889 aa9.81□□□□□ -0.84
ACTN1-215ENST00000555616 CEP44Q9C0F1 390 aa9.81□□□□□ -0.84
ACTN1-215ENST00000555616 MIR1-1HGQ9H1L0 117 aa9.81□□□□□ -0.84
ACTN1-215ENST00000555616 NEUROG2Q9H2A3 272 aa9.81□□□□□ -0.84
ACTN1-215ENST00000555616 PCDH18Q9HCL0 1135 aa9.81□□□□□ -0.84
ACTN1-215ENST00000555616 GPATCH2LQ9NWQ4 482 aa9.81□□□□□ -0.84
ACTN1-215ENST00000555616 EIF2B4Q9UI10 523 aaKnown RBP9.81□□□□□ -0.84
ACTN1-215ENST00000555616 PPM1HQ9ULR3 514 aa9.81□□□□□ -0.84
ACTN1-215ENST00000555616 TTC7AQ9ULT0 858 aaPredicted RBP9.81□□□□□ -0.84
ACTN1-215ENST00000555616 TPX2Q9ULW0 747 aaKnown RBP9.81□□□□□ -0.84
ACTN1-215ENST00000555616 EFR3BQ9Y2G0 817 aa9.81□□□□□ -0.84
ACTN1-215ENST00000555616 MRFAP1Q9Y605 127 aa9.81□□□□□ -0.84
ACTN1-215ENST00000555616 SLCO1B1Q9Y6L6 691 aa9.81□□□□□ -0.84
ACTN1-215ENST00000555616 CNOT1A5YKK6 2376 aaKnown RBP9.81□□□□□ -0.84
ACTN1-215ENST00000555616 CACNA1EQ15878 2313 aa9.81□□□□□ -0.84
ACTN1-215ENST00000555616 GOLGA6L10A0A0M3HER8 536 aa9.8□□□□□ -0.84
ACTN1-215ENST00000555616 LRRC72A6NJI9 287 aa9.8□□□□□ -0.84
ACTN1-215ENST00000555616 C1QTNF3-AMACRE9PGA6 284 aa9.8□□□□□ -0.84
ACTN1-215ENST00000555616 K7ERQ8 282 aa9.8□□□□□ -0.84
ACTN1-215ENST00000555616 CBX4O00257 560 aa9.8□□□□□ -0.84
ACTN1-215ENST00000555616 EEF2KO00418 725 aaKnown RBP9.8□□□□□ -0.84
ACTN1-215ENST00000555616 ZNF185O15231 689 aa9.8□□□□□ -0.84
ACTN1-215ENST00000555616 DAPK3O43293 454 aa9.8□□□□□ -0.84
ACTN1-215ENST00000555616 SMAD6O43541 496 aaKnown RBP9.8□□□□□ -0.84
ACTN1-215ENST00000555616 LATO43561 262 aa9.8□□□□□ -0.84
ACTN1-215ENST00000555616 CREB3O43889 395 aa9.8□□□□□ -0.84
ACTN1-215ENST00000555616 FSBPO95073 299 aa9.8□□□□□ -0.84
ACTN1-215ENST00000555616 FGGP02679 453 aa9.8□□□□□ -0.84
ACTN1-215ENST00000555616 GLDCP23378 1020 aa9.8□□□□□ -0.84
ACTN1-215ENST00000555616 CDKN2BP42772 138 aa9.8□□□□□ -0.84
ACTN1-215ENST00000555616 GRIA4P48058 902 aa9.8□□□□□ -0.84
ACTN1-215ENST00000555616 HCAR3P49019 387 aa9.8□□□□□ -0.84
ACTN1-215ENST00000555616 NOVA1P51513 510 aaKnown RBP9.8□□□□□ -0.84
ACTN1-215ENST00000555616 CCR5P51681 352 aa9.8□□□□□ -0.84
ACTN1-215ENST00000555616 ARSEP51690 589 aa9.8□□□□□ -0.84
ACTN1-215ENST00000555616 AFF3P51826 1226 aaKnown RBP9.8□□□□□ -0.84
ACTN1-215ENST00000555616 METAP1P53582 386 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms