RNA–Protein interactions for RNA: ENST00000555565.5

TDP1-212, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 524 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-212ENST00000555565 MSANTD4Q8NCY6 345 aa11.04□□□□□ -0.64
TDP1-212ENST00000555565 OR7D4Q8NG98 312 aa11.04□□□□□ -0.64
TDP1-212ENST00000555565 GPT2Q8TD30 523 aa11.04□□□□□ -0.64
TDP1-212ENST00000555565 DEPDC7Q96QD5 511 aa11.04□□□□□ -0.64
TDP1-212ENST00000555565 RAB6CQ9H0N0 254 aa11.04□□□□□ -0.64
TDP1-212ENST00000555565 NLRC4Q9NPP4 1024 aa11.04□□□□□ -0.64
TDP1-212ENST00000555565 METTL5Q9NRN9 209 aaKnown RBP11.04□□□□□ -0.64
TDP1-212ENST00000555565 THSD1Q9NS62 852 aa11.04□□□□□ -0.64
TDP1-212ENST00000555565 STARD5Q9NSY2 213 aa11.04□□□□□ -0.64
TDP1-212ENST00000555565 FANCLQ9NW38 375 aa11.04□□□□□ -0.64
TDP1-212ENST00000555565 SATB2Q9UPW6 733 aa11.04□□□□□ -0.64
TDP1-212ENST00000555565 CA5BQ9Y2D0 317 aa11.04□□□□□ -0.64
TDP1-212ENST00000555565 SIK3Q9Y2K2 1263 aa11.04□□□□□ -0.64
TDP1-212ENST00000555565 TDRD6O60522 2096 aaKnown RBP11.04□□□□□ -0.64
TDP1-212ENST00000555565 DOPEY2Q9Y3R5 2298 aa11.04□□□□□ -0.64
TDP1-212ENST00000555565 ILVBLA1L0T0 632 aa11.03□□□□□ -0.64
TDP1-212ENST00000555565 KPNA3O00505 521 aaPredicted RBP11.03□□□□□ -0.64
TDP1-212ENST00000555565 SUV39H1O43463 412 aa11.03□□□□□ -0.64
TDP1-212ENST00000555565 ZNF821O75541 412 aaPredicted RBP11.03□□□□□ -0.64
TDP1-212ENST00000555565 ZMPSTE24O75844 475 aa11.03□□□□□ -0.64
TDP1-212ENST00000555565 GP1BAP07359 652 aa11.03□□□□□ -0.64
TDP1-212ENST00000555565 CHRNA3P32297 505 aa11.03□□□□□ -0.64
TDP1-212ENST00000555565 SOX5P35711 763 aa11.03□□□□□ -0.64
TDP1-212ENST00000555565 NUDT1P36639 197 aa11.03□□□□□ -0.64
TDP1-212ENST00000555565 CLCN6P51797 869 aa11.03□□□□□ -0.64
TDP1-212ENST00000555565 DAB2P98082 770 aa11.03□□□□□ -0.64
TDP1-212ENST00000555565 ATP11AP98196 1134 aa11.03□□□□□ -0.64
TDP1-212ENST00000555565 NFKB2Q00653 900 aa11.03□□□□□ -0.64
TDP1-212ENST00000555565 CLN3Q13286 438 aa11.03□□□□□ -0.64
TDP1-212ENST00000555565 CCDC14Q49A88 953 aa11.03□□□□□ -0.64
TDP1-212ENST00000555565 C22orf39Q6P5X5 142 aa11.03□□□□□ -0.64
TDP1-212ENST00000555565 TMC6Q7Z403 805 aa11.03□□□□□ -0.64
TDP1-212ENST00000555565 PHLDB2Q86SQ0 1253 aa11.03□□□□□ -0.64
TDP1-212ENST00000555565 PRPF39Q86UA1 669 aaKnown RBP11.03□□□□□ -0.64
TDP1-212ENST00000555565 TMEM145Q8NBT3 493 aa11.03□□□□□ -0.64
TDP1-212ENST00000555565 CHST14Q8NCH0 376 aa11.03□□□□□ -0.64
TDP1-212ENST00000555565 TMIEQ8NEW7 156 aa11.03□□□□□ -0.64
TDP1-212ENST00000555565 JOSD2Q8TAC2 188 aa11.03□□□□□ -0.64
TDP1-212ENST00000555565 SLC30A5Q8TAD4 765 aa11.03□□□□□ -0.64
TDP1-212ENST00000555565 RXFP2Q8WXD0 754 aa11.03□□□□□ -0.64
TDP1-212ENST00000555565 ARRDC3Q96B67 414 aa11.03□□□□□ -0.64
TDP1-212ENST00000555565 APOLD1Q96LR9 279 aa11.03□□□□□ -0.64
TDP1-212ENST00000555565 CCDC114Q96M63 670 aa11.03□□□□□ -0.64
TDP1-212ENST00000555565 ZYG11BQ9C0D3 744 aa11.03□□□□□ -0.64
TDP1-212ENST00000555565 OSBPL2Q9H1P3 480 aa11.03□□□□□ -0.64
TDP1-212ENST00000555565 TNKS2Q9H2K2 1166 aa11.03□□□□□ -0.64
TDP1-212ENST00000555565 PREBQ9HCU5 417 aa11.03□□□□□ -0.64
TDP1-212ENST00000555565 KLHL11Q9NVR0 708 aa11.03□□□□□ -0.64
TDP1-212ENST00000555565 DMTF1Q9Y222 760 aa11.03□□□□□ -0.64
TDP1-212ENST00000555565 FARP1Q9Y4F1 1045 aaPredicted RBP11.03□□□□□ -0.64
TDP1-212ENST00000555565 USP9XQ93008 2570 aaPredicted RBP11.02□□□□□ -0.65
TDP1-212ENST00000555565 CASC3O15234 703 aaKnown RBP11.02□□□□□ -0.65
TDP1-212ENST00000555565 GJB6O95452 261 aa11.02□□□□□ -0.65
TDP1-212ENST00000555565 NTRK1P04629 796 aa11.02□□□□□ -0.65
TDP1-212ENST00000555565 TGM2P21980 687 aa11.02□□□□□ -0.65
TDP1-212ENST00000555565 ADRA1BP35368 520 aa11.02□□□□□ -0.65
TDP1-212ENST00000555565 COPB1P53618 953 aaKnown RBP11.02□□□□□ -0.65
TDP1-212ENST00000555565 GNA12Q03113 381 aa11.02□□□□□ -0.65
TDP1-212ENST00000555565 PTP4A2Q12974 167 aa11.02□□□□□ -0.65
TDP1-212ENST00000555565 SYCP1Q15431 976 aa11.02□□□□□ -0.65
TDP1-212ENST00000555565 C15orf59Q2T9L4 293 aaPredicted RBP11.02□□□□□ -0.65
TDP1-212ENST00000555565 ARSIQ5FYB1 569 aa11.02□□□□□ -0.65
TDP1-212ENST00000555565 FKBP15Q5T1M5 1219 aa11.02□□□□□ -0.65
TDP1-212ENST00000555565 MANEALQ5VSG8 457 aa11.02□□□□□ -0.65
TDP1-212ENST00000555565 ZNF783Q6ZMS7 281 aa11.02□□□□□ -0.65
TDP1-212ENST00000555565 CCDC81Q6ZN84 652 aa11.02□□□□□ -0.65
TDP1-212ENST00000555565 DPY19L3Q6ZPD9 716 aa11.02□□□□□ -0.65
TDP1-212ENST00000555565 DRC7Q8IY82 874 aa11.02□□□□□ -0.65
TDP1-212ENST00000555565 GRIN3AQ8TCU5 1115 aa11.02□□□□□ -0.65
TDP1-212ENST00000555565 PCDHB18PQ96TA0 734 aa11.02□□□□□ -0.65
TDP1-212ENST00000555565 C11orf70Q9BRQ4 267 aa11.02□□□□□ -0.65
TDP1-212ENST00000555565 SPON2Q9BUD6 331 aa11.02□□□□□ -0.65
TDP1-212ENST00000555565 FAM117AQ9C073 453 aa11.02□□□□□ -0.65
TDP1-212ENST00000555565 NDFIP2Q9NV92 336 aa11.02□□□□□ -0.65
TDP1-212ENST00000555565 ANKMY1Q9P2S6 941 aa11.02□□□□□ -0.65
TDP1-212ENST00000555565 PPARGC1AQ9UBK2 798 aaKnown RBP11.02□□□□□ -0.65
TDP1-212ENST00000555565 PCDHGA8Q9Y5G5 932 aa11.02□□□□□ -0.65
TDP1-212ENST00000555565 ENTPD2Q9Y5L3 495 aa11.02□□□□□ -0.65
TDP1-212ENST00000555565 AHCTF1Q8WYP5 2266 aa11.02□□□□□ -0.65
TDP1-212ENST00000555565 TLN1Q9Y490 2541 aaKnown RBP11.01□□□□□ -0.65
TDP1-212ENST00000555565 A0A1W2PQU0 124 aa11.01□□□□□ -0.65
TDP1-212ENST00000555565 C2CD4BA6NLJ0 364 aa11.01□□□□□ -0.65
TDP1-212ENST00000555565 FAM72CH0Y354 149 aa11.01□□□□□ -0.65
TDP1-212ENST00000555565 PRAMEF26H0Y7S4 382 aa11.01□□□□□ -0.65
TDP1-212ENST00000555565 SLC31A1O15431 190 aa11.01□□□□□ -0.65
TDP1-212ENST00000555565 FFAR2O15552 330 aa11.01□□□□□ -0.65
TDP1-212ENST00000555565 NOBOXO60393 691 aa11.01□□□□□ -0.65
TDP1-212ENST00000555565 MAGEC1O60732 1142 aa11.01□□□□□ -0.65
TDP1-212ENST00000555565 RNGTTO60942 597 aaKnown RBP11.01□□□□□ -0.65
TDP1-212ENST00000555565 PIAS2O75928 621 aa11.01□□□□□ -0.65
TDP1-212ENST00000555565 CD160O95971 181 aa11.01□□□□□ -0.65
TDP1-212ENST00000555565 PRNPP04156 253 aa11.01□□□□□ -0.65
TDP1-212ENST00000555565 TPM2P07951 284 aa11.01□□□□□ -0.65
TDP1-212ENST00000555565 UNGP13051 313 aaPredicted RBP11.01□□□□□ -0.65
TDP1-212ENST00000555565 PRLRP16471 622 aa11.01□□□□□ -0.65
TDP1-212ENST00000555565 SDC4P31431 198 aa11.01□□□□□ -0.65
TDP1-212ENST00000555565 RFC1P35251 1148 aaPredicted RBP11.01□□□□□ -0.65
TDP1-212ENST00000555565 ANP32AP39687 249 aaKnown RBP11.01□□□□□ -0.65
TDP1-212ENST00000555565 STAT1P42224 750 aa11.01□□□□□ -0.65
TDP1-212ENST00000555565 PTPN9P43378 593 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms