RNA–Protein interactions for RNA: ENST00000555557.5

SRP54-208, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-208ENST00000555557 BRD9Q9H8M2 597 aa10.35□□□□□ -0.75
SRP54-208ENST00000555557 KCNK12Q9HB15 430 aa10.35□□□□□ -0.75
SRP54-208ENST00000555557 NOD2Q9HC29 1040 aa10.35□□□□□ -0.75
SRP54-208ENST00000555557 PRDM6Q9NQX0 595 aa10.35□□□□□ -0.75
SRP54-208ENST00000555557 AAR2Q9Y312 384 aaKnown RBP10.35□□□□□ -0.75
SRP54-208ENST00000555557 PRRT4C9JH25 899 aa10.35□□□□□ -0.75
SRP54-208ENST00000555557 NDC80O14777 642 aa10.35□□□□□ -0.75
SRP54-208ENST00000555557 PPFIA2O75334 1257 aa10.35□□□□□ -0.75
SRP54-208ENST00000555557 ZNF821O75541 412 aaPredicted RBP10.35□□□□□ -0.75
SRP54-208ENST00000555557 ANXA9O76027 345 aa10.35□□□□□ -0.75
SRP54-208ENST00000555557 ASGR2P07307 311 aa10.35□□□□□ -0.75
SRP54-208ENST00000555557 SRCP12931 536 aa10.35□□□□□ -0.75
SRP54-208ENST00000555557 TPH1P17752 444 aa10.35□□□□□ -0.75
SRP54-208ENST00000555557 POLR2EP19388 210 aaKnown RBP10.35□□□□□ -0.75
SRP54-208ENST00000555557 HSPA9P38646 679 aaKnown RBP10.35□□□□□ -0.75
SRP54-208ENST00000555557 OPRD1P41143 372 aa10.35□□□□□ -0.75
SRP54-208ENST00000555557 ARL4CP56559 192 aa10.35□□□□□ -0.75
SRP54-208ENST00000555557 SESN2P58004 480 aaPredicted RBP10.35□□□□□ -0.75
SRP54-208ENST00000555557 RHOAP61586 193 aa10.35□□□□□ -0.75
SRP54-208ENST00000555557 SKOR1P84550 965 aa10.35□□□□□ -0.75
SRP54-208ENST00000555557 ECT2LQ008S8 904 aa10.35□□□□□ -0.75
SRP54-208ENST00000555557 UAP1Q16222 522 aaPredicted RBP10.35□□□□□ -0.75
SRP54-208ENST00000555557 KYNUQ16719 465 aa10.35□□□□□ -0.75
SRP54-208ENST00000555557 ACCSLQ4AC99 568 aa10.35□□□□□ -0.75
SRP54-208ENST00000555557 DGKKQ5KSL6 1271 aa10.35□□□□□ -0.75
SRP54-208ENST00000555557 DENND2CQ68D51 928 aa10.35□□□□□ -0.75
SRP54-208ENST00000555557 IGDCC3Q8IVU1 814 aa10.35□□□□□ -0.75
SRP54-208ENST00000555557 ZBED8Q8IZ13 594 aa10.35□□□□□ -0.75
SRP54-208ENST00000555557 PDIK1LQ8N165 341 aa10.35□□□□□ -0.75
SRP54-208ENST00000555557 MPP5Q8N3R9 675 aa10.35□□□□□ -0.75
SRP54-208ENST00000555557 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.35□□□□□ -0.75
SRP54-208ENST00000555557 ZNF557Q8N988 423 aaPredicted RBP10.35□□□□□ -0.75
SRP54-208ENST00000555557 MCUQ8NE86 351 aa10.35□□□□□ -0.75
SRP54-208ENST00000555557 UHMK1Q8TAS1 419 aaKnown RBP10.35□□□□□ -0.75
SRP54-208ENST00000555557 UBLCP1Q8WVY7 318 aaPredicted RBP10.35□□□□□ -0.75
SRP54-208ENST00000555557 MRGPRX2Q96LB1 330 aa10.35□□□□□ -0.75
SRP54-208ENST00000555557 FICDQ9BVA6 458 aa10.35□□□□□ -0.75
SRP54-208ENST00000555557 PHF7Q9BWX1 381 aaPredicted RBP10.35□□□□□ -0.75
SRP54-208ENST00000555557 CDC42EP4Q9H3Q1 356 aaKnown RBP10.35□□□□□ -0.75
SRP54-208ENST00000555557 EIF2B3Q9NR50 452 aaKnown RBP10.35□□□□□ -0.75
SRP54-208ENST00000555557 DEC1Q9P2X7 70 aa10.35□□□□□ -0.75
SRP54-208ENST00000555557 LHX3Q9UBR4 397 aa10.35□□□□□ -0.75
SRP54-208ENST00000555557 DENND4AQ7Z401 1863 aa10.35□□□□□ -0.75
SRP54-208ENST00000555557 A0A0C4DFX4 3053 aa10.35□□□□□ -0.75
SRP54-208ENST00000555557 SMAPO00193 183 aa10.34□□□□□ -0.75
SRP54-208ENST00000555557 INSIG1O15503 277 aa10.34□□□□□ -0.75
SRP54-208ENST00000555557 BNIP3LO60238 219 aa10.34□□□□□ -0.75
SRP54-208ENST00000555557 SASH3O75995 380 aa10.34□□□□□ -0.75
SRP54-208ENST00000555557 SUN1O94901 812 aa10.34□□□□□ -0.75
SRP54-208ENST00000555557 CR2P20023 1033 aa10.34□□□□□ -0.75
SRP54-208ENST00000555557 GKP32189 559 aa10.34□□□□□ -0.75
SRP54-208ENST00000555557 HSD17B3P37058 310 aa10.34□□□□□ -0.75
SRP54-208ENST00000555557 MAGEA4P43358 317 aa10.34□□□□□ -0.75
SRP54-208ENST00000555557 CHRNA4P43681 627 aa10.34□□□□□ -0.75
SRP54-208ENST00000555557 GEMP55040 296 aa10.34□□□□□ -0.75
SRP54-208ENST00000555557 WNT3AP56704 352 aa10.34□□□□□ -0.75
SRP54-208ENST00000555557 CRADDP78560 199 aa10.34□□□□□ -0.75
SRP54-208ENST00000555557 CASP8Q14790 479 aa10.34□□□□□ -0.75
SRP54-208ENST00000555557 SLMAPQ14BN4 828 aa10.34□□□□□ -0.75
SRP54-208ENST00000555557 SMAD2Q15796 467 aaKnown RBP10.34□□□□□ -0.75
SRP54-208ENST00000555557 ITPRIPL2Q3MIP1 535 aa10.34□□□□□ -0.75
SRP54-208ENST00000555557 PTCRAQ6ISU1 281 aaPredicted RBP10.34□□□□□ -0.75
SRP54-208ENST00000555557 LRRC8BQ6P9F7 803 aa10.34□□□□□ -0.75
SRP54-208ENST00000555557 KDELC1Q6UW63 502 aa10.34□□□□□ -0.75
SRP54-208ENST00000555557 PPP1R21Q6ZMI0 780 aa10.34□□□□□ -0.75
SRP54-208ENST00000555557 CAPN12Q6ZSI9 719 aa10.34□□□□□ -0.75
SRP54-208ENST00000555557 CENPUQ71F23 418 aa10.34□□□□□ -0.75
SRP54-208ENST00000555557 DNAAF3Q8N9W5 541 aa10.34□□□□□ -0.75
SRP54-208ENST00000555557 TTC17Q96AE7 1141 aa10.34□□□□□ -0.75
SRP54-208ENST00000555557 TRIM56Q9BRZ2 755 aaKnown RBP10.34□□□□□ -0.75
SRP54-208ENST00000555557 FUT8Q9BYC5 575 aa10.34□□□□□ -0.75
SRP54-208ENST00000555557 LRRC40Q9H9A6 602 aa10.34□□□□□ -0.75
SRP54-208ENST00000555557 FBRSL1Q9HCM7 1045 aaKnown RBP10.34□□□□□ -0.75
SRP54-208ENST00000555557 SCUBE2Q9NQ36 999 aa10.34□□□□□ -0.75
SRP54-208ENST00000555557 SLC25A13Q9UJS0 675 aa10.34□□□□□ -0.75
SRP54-208ENST00000555557 ERVW-1Q9UQF0 538 aa10.34□□□□□ -0.75
SRP54-208ENST00000555557 SLC27A6Q9Y2P4 619 aa10.34□□□□□ -0.75
SRP54-208ENST00000555557 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.34□□□□□ -0.75
SRP54-208ENST00000555557 GOLGA6CA6NDK9 693 aa10.33□□□□□ -0.76
SRP54-208ENST00000555557 GOLGA6BA6NDN3 693 aa10.33□□□□□ -0.76
SRP54-208ENST00000555557 TBC1D3BA6NDS4 549 aa10.33□□□□□ -0.76
SRP54-208ENST00000555557 ALOX15BO15296 676 aa10.33□□□□□ -0.76
SRP54-208ENST00000555557 ACSL3O95573 720 aa10.33□□□□□ -0.76
SRP54-208ENST00000555557 GOLGA6DP0CG33 693 aa10.33□□□□□ -0.76
SRP54-208ENST00000555557 BMP1P13497 986 aa10.33□□□□□ -0.76
SRP54-208ENST00000555557 IL9P15248 144 aa10.33□□□□□ -0.76
SRP54-208ENST00000555557 MGAT1P26572 445 aa10.33□□□□□ -0.76
SRP54-208ENST00000555557 ADRA1AP35348 466 aa10.33□□□□□ -0.76
SRP54-208ENST00000555557 ELK3P41970 407 aa10.33□□□□□ -0.76
SRP54-208ENST00000555557 SARNPP82979 210 aaKnown RBP10.33□□□□□ -0.76
SRP54-208ENST00000555557 CDK16Q00536 496 aa10.33□□□□□ -0.76
SRP54-208ENST00000555557 SLC20A2Q08357 652 aa10.33□□□□□ -0.76
SRP54-208ENST00000555557 MPP3Q13368 585 aa10.33□□□□□ -0.76
SRP54-208ENST00000555557 DMC1Q14565 340 aa10.33□□□□□ -0.76
SRP54-208ENST00000555557 DLG2Q15700 870 aa10.33□□□□□ -0.76
SRP54-208ENST00000555557 ALG1LQ6GMV1 187 aa10.33□□□□□ -0.76
SRP54-208ENST00000555557 GRAMD4Q6IC98 578 aa10.33□□□□□ -0.76
SRP54-208ENST00000555557 KLHDC8BQ8IXV7 354 aa10.33□□□□□ -0.76
SRP54-208ENST00000555557 PHTF2Q8N3S3 785 aa10.33□□□□□ -0.76
SRP54-208ENST00000555557 SLC44A3Q8N4M1 653 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms