RNA–Protein interactions for RNA: ENST00000555550.1

SCFD1-216, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-216ENST00000555550 THPOP40225 353 aa4.04□□□□□ -1.76
SCFD1-216ENST00000555550 MVDP53602 400 aa4.04□□□□□ -1.76
SCFD1-216ENST00000555550 PKP1Q13835 747 aa4.04□□□□□ -1.76
SCFD1-216ENST00000555550 IL13RA2Q14627 380 aa4.04□□□□□ -1.76
SCFD1-216ENST00000555550 ZNF718Q3SXZ3 478 aa4.04□□□□□ -1.76
SCFD1-216ENST00000555550 TDRD12Q587J7 1177 aaKnown RBP4.04□□□□□ -1.76
SCFD1-216ENST00000555550 ZNF484Q5JVG2 852 aa4.04□□□□□ -1.76
SCFD1-216ENST00000555550 CREB3L2Q70SY1 520 aa4.04□□□□□ -1.76
SCFD1-216ENST00000555550 GHDCQ8N2G8 530 aa4.04□□□□□ -1.76
SCFD1-216ENST00000555550 MYCT1Q8N699 235 aa4.04□□□□□ -1.76
SCFD1-216ENST00000555550 ANKRD44Q8N8A2 993 aa4.04□□□□□ -1.76
SCFD1-216ENST00000555550 ENAHQ8N8S7 591 aaPredicted RBP4.04□□□□□ -1.76
SCFD1-216ENST00000555550 LINS1Q8NG48 757 aa4.04□□□□□ -1.76
SCFD1-216ENST00000555550 AFG1LQ8WV93 481 aa4.04□□□□□ -1.76
SCFD1-216ENST00000555550 INPP4AQ96PE3 977 aaPredicted RBP4.04□□□□□ -1.76
SCFD1-216ENST00000555550 FAM167BQ9BTA0 163 aa4.04□□□□□ -1.76
SCFD1-216ENST00000555550 HERC2P3Q9BVR0 1158 aa4.04□□□□□ -1.76
SCFD1-216ENST00000555550 KIF17Q9P2E2 1029 aa4.04□□□□□ -1.76
SCFD1-216ENST00000555550 KCNG2Q9UJ96 466 aa4.04□□□□□ -1.76
SCFD1-216ENST00000555550 A0A096LPK6 155 aa4.03□□□□□ -1.76
SCFD1-216ENST00000555550 A0A0B4J293 547 aa4.03□□□□□ -1.76
SCFD1-216ENST00000555550 DENND3A2RUS2 1198 aa4.03□□□□□ -1.76
SCFD1-216ENST00000555550 KDM4EB2RXH2 506 aaPredicted RBP4.03□□□□□ -1.76
SCFD1-216ENST00000555550 UMODP07911 640 aa4.03□□□□□ -1.76
SCFD1-216ENST00000555550 FCGR1AP12314 374 aa4.03□□□□□ -1.76
SCFD1-216ENST00000555550 CKMT1AP12532 417 aa4.03□□□□□ -1.76
SCFD1-216ENST00000555550 TNNT1P13805 278 aa4.03□□□□□ -1.76
SCFD1-216ENST00000555550 GNLYP22749 145 aa4.03□□□□□ -1.76
SCFD1-216ENST00000555550 AMTP48728 403 aa4.03□□□□□ -1.76
SCFD1-216ENST00000555550 FAM83BQ5T0W9 1011 aa4.03□□□□□ -1.76
SCFD1-216ENST00000555550 ANKRD45Q5TZF3 282 aa4.03□□□□□ -1.76
SCFD1-216ENST00000555550 C9orf57Q5W0N0 161 aa4.03□□□□□ -1.76
SCFD1-216ENST00000555550 C8orf82Q6P1X6 216 aaPredicted RBP4.03□□□□□ -1.76
SCFD1-216ENST00000555550 TRIM74Q86UV6 250 aa4.03□□□□□ -1.76
SCFD1-216ENST00000555550 TRIM73Q86UV7 250 aa4.03□□□□□ -1.76
SCFD1-216ENST00000555550 TMC8Q8IU68 726 aa4.03□□□□□ -1.76
SCFD1-216ENST00000555550 TBC1D22AQ8WUA7 517 aa4.03□□□□□ -1.76
SCFD1-216ENST00000555550 TRAPPC12Q8WVT3 735 aa4.03□□□□□ -1.76
SCFD1-216ENST00000555550 TMED6Q8WW62 240 aa4.03□□□□□ -1.76
SCFD1-216ENST00000555550 TMEM18Q96B42 140 aa4.03□□□□□ -1.76
SCFD1-216ENST00000555550 CTDSP1Q9GZU7 261 aa4.03□□□□□ -1.76
SCFD1-216ENST00000555550 GRHL1Q9NZI5 618 aa4.03□□□□□ -1.76
SCFD1-216ENST00000555550 KCNJ13O60928 360 aa4.02□□□□□ -1.77
SCFD1-216ENST00000555550 SERPINI2O75830 405 aa4.02□□□□□ -1.77
SCFD1-216ENST00000555550 RXRAP19793 462 aa4.02□□□□□ -1.77
SCFD1-216ENST00000555550 C21orf33P30042 268 aaPredicted RBP4.02□□□□□ -1.77
SCFD1-216ENST00000555550 GJC1P36383 396 aa4.02□□□□□ -1.77
SCFD1-216ENST00000555550 PTPN9P43378 593 aa4.02□□□□□ -1.77
SCFD1-216ENST00000555550 GPR12P47775 334 aa4.02□□□□□ -1.77
SCFD1-216ENST00000555550 POSTNQ15063 836 aa4.02□□□□□ -1.77
SCFD1-216ENST00000555550 NCAPH2Q6IBW4 605 aa4.02□□□□□ -1.77
SCFD1-216ENST00000555550 TMEM57Q8N5G2 664 aa4.02□□□□□ -1.77
SCFD1-216ENST00000555550 RASSF8Q8NHQ8 419 aa4.02□□□□□ -1.77
SCFD1-216ENST00000555550 TMEM163Q8TC26 289 aa4.02□□□□□ -1.77
SCFD1-216ENST00000555550 THAP4Q8WY91 577 aa4.02□□□□□ -1.77
SCFD1-216ENST00000555550 TXNDC15Q96J42 360 aa4.02□□□□□ -1.77
SCFD1-216ENST00000555550 CXorf56Q9H5V9 222 aa4.02□□□□□ -1.77
SCFD1-216ENST00000555550 RETREG1Q9H6L5 497 aa4.02□□□□□ -1.77
SCFD1-216ENST00000555550 FBXO40Q9UH90 709 aa4.02□□□□□ -1.77
SCFD1-216ENST00000555550 SUFUQ9UMX1 484 aa4.02□□□□□ -1.77
SCFD1-216ENST00000555550 DERAQ9Y315 318 aa4.02□□□□□ -1.77
SCFD1-216ENST00000555550 LINC01553A4QN01 128 aa4.01□□□□□ -1.77
SCFD1-216ENST00000555550 STX16-NPEPL1H3BU86 382 aa4.01□□□□□ -1.77
SCFD1-216ENST00000555550 STX16O14662 325 aa4.01□□□□□ -1.77
SCFD1-216ENST00000555550 SLC25A17O43808 307 aa4.01□□□□□ -1.77
SCFD1-216ENST00000555550 VEGFAP15692 232 aaPredicted RBP4.01□□□□□ -1.77
SCFD1-216ENST00000555550 ITGB8P26012 769 aa4.01□□□□□ -1.77
SCFD1-216ENST00000555550 ADD2P35612 726 aa4.01□□□□□ -1.77
SCFD1-216ENST00000555550 MTNR1AP48039 350 aa4.01□□□□□ -1.77
SCFD1-216ENST00000555550 ACTR2P61160 394 aa4.01□□□□□ -1.77
SCFD1-216ENST00000555550 DDR1Q08345 913 aa4.01□□□□□ -1.77
SCFD1-216ENST00000555550 KIF5AQ12840 1032 aa4.01□□□□□ -1.77
SCFD1-216ENST00000555550 MYBPC2Q14324 1141 aa4.01□□□□□ -1.77
SCFD1-216ENST00000555550 SLC39A14Q15043 492 aa4.01□□□□□ -1.77
SCFD1-216ENST00000555550 ADCK5Q3MIX3 580 aa4.01□□□□□ -1.77
SCFD1-216ENST00000555550 TUBB8Q3ZCM7 444 aa4.01□□□□□ -1.77
SCFD1-216ENST00000555550 TBC1D9BQ66K14 1250 aa4.01□□□□□ -1.77
SCFD1-216ENST00000555550 TYW3Q6IPR3 259 aaKnown RBP4.01□□□□□ -1.77
SCFD1-216ENST00000555550 DNAAF1Q8NEP3 725 aa4.01□□□□□ -1.77
SCFD1-216ENST00000555550 FAM216AQ8WUB2 273 aa4.01□□□□□ -1.77
SCFD1-216ENST00000555550 CCT6BQ92526 530 aa4.01□□□□□ -1.77
SCFD1-216ENST00000555550 SDCCAG3Q96C92 435 aa4.01□□□□□ -1.77
SCFD1-216ENST00000555550 RTP4Q96DX8 246 aa4.01□□□□□ -1.77
SCFD1-216ENST00000555550 NPLQ9BXD5 320 aaPredicted RBP4.01□□□□□ -1.77
SCFD1-216ENST00000555550 C1QTNF4Q9BXJ3 329 aa4.01□□□□□ -1.77
SCFD1-216ENST00000555550 NPFFR1Q9GZQ6 430 aa4.01□□□□□ -1.77
SCFD1-216ENST00000555550 TLR8Q9NR97 1041 aaKnown RBP4.01□□□□□ -1.77
SCFD1-216ENST00000555550 OCIAD1Q9NX40 245 aa4.01□□□□□ -1.77
SCFD1-216ENST00000555550 NLKQ9UBE8 527 aa4.01□□□□□ -1.77
SCFD1-216ENST00000555550 RRP7AQ9Y3A4 280 aaKnown RBP4.01□□□□□ -1.77
SCFD1-216ENST00000555550 RAI2Q9Y5P3 530 aa4.01□□□□□ -1.77
SCFD1-216ENST00000555550 PLSCR5A0PG75 271 aa4□□□□□ -1.77
SCFD1-216ENST00000555550 C17orf100A8MU93 164 aa4□□□□□ -1.77
SCFD1-216ENST00000555550 FAM157AC9JC47 383 aa4□□□□□ -1.77
SCFD1-216ENST00000555550 ANP32CO43423 234 aa4□□□□□ -1.77
SCFD1-216ENST00000555550 TK1P04183 234 aa4□□□□□ -1.77
SCFD1-216ENST00000555550 TRAPPC10P48553 1259 aa4□□□□□ -1.77
SCFD1-216ENST00000555550 DLX5P56178 289 aa4□□□□□ -1.77
SCFD1-216ENST00000555550 RHBDL3P58872 404 aa4□□□□□ -1.77
SCFD1-216ENST00000555550 SEC61A1P61619 476 aaKnown RBP4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms