RNA–Protein interactions for RNA: ENST00000555382.5

PRKCH-215, Transcript of protein kinase C eta, human

TSL 3

Gene PRKCH, Length 691 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKCH-215	ENST00000555382	CASQ1	P31415	396 aa		9.81	□□□□□ -0.84
PRKCH-215	ENST00000555382	KIR2DL1	P43626	348 aa	Predicted RBP	9.81	□□□□□ -0.84
PRKCH-215	ENST00000555382	SERINC3	Q13530	473 aa		9.81	□□□□□ -0.84
PRKCH-215	ENST00000555382	ENPP2	Q13822	863 aa		9.81	□□□□□ -0.84
PRKCH-215	ENST00000555382	RFTN1	Q14699	578 aa	Predicted RBP	9.81	□□□□□ -0.84
PRKCH-215	ENST00000555382	POLD3	Q15054	466 aa	Predicted RBP	9.81	□□□□□ -0.84
PRKCH-215	ENST00000555382	PDK1	Q15118	436 aa		9.81	□□□□□ -0.84
PRKCH-215	ENST00000555382	PLEKHG6	Q3KR16	790 aa		9.81	□□□□□ -0.84
PRKCH-215	ENST00000555382	INO80D	Q53TQ3	878 aa	Predicted RBP	9.81	□□□□□ -0.84
PRKCH-215	ENST00000555382	GRAMD4	Q6IC98	578 aa		9.81	□□□□□ -0.84
PRKCH-215	ENST00000555382	ARMCX6	Q7L4S7	300 aa		9.81	□□□□□ -0.84
PRKCH-215	ENST00000555382	ADIPOR2	Q86V24	386 aa		9.81	□□□□□ -0.84
PRKCH-215	ENST00000555382	SLC13A5	Q86YT5	568 aa	Predicted RBP	9.81	□□□□□ -0.84
PRKCH-215	ENST00000555382	ARHGAP12	Q8IWW6	846 aa		9.81	□□□□□ -0.84
PRKCH-215	ENST00000555382	C17orf53	Q8N3J3	647 aa	Predicted RBP	9.81	□□□□□ -0.84
PRKCH-215	ENST00000555382	TERB1	Q8NA31	727 aa		9.81	□□□□□ -0.84
PRKCH-215	ENST00000555382	IL17RC	Q8NAC3	791 aa		9.81	□□□□□ -0.84
PRKCH-215	ENST00000555382	OR2I1P	Q8NGU4	316 aa		9.81	□□□□□ -0.84
PRKCH-215	ENST00000555382	TRAF3IP1	Q8TDR0	691 aa	Predicted RBP	9.81	□□□□□ -0.84
PRKCH-215	ENST00000555382	P3H4	Q92791	437 aa		9.81	□□□□□ -0.84
PRKCH-215	ENST00000555382	ARHGEF2	Q92974	986 aa	Known RBP	9.81	□□□□□ -0.84
PRKCH-215	ENST00000555382	HDAC11	Q96DB2	347 aa		9.81	□□□□□ -0.84
PRKCH-215	ENST00000555382	ZNF599	Q96NL3	588 aa		9.81	□□□□□ -0.84
PRKCH-215	ENST00000555382	CAMK1G	Q96NX5	476 aa		9.81	□□□□□ -0.84
PRKCH-215	ENST00000555382	C2orf49	Q9BVC5	232 aa	Predicted RBP	9.81	□□□□□ -0.84
PRKCH-215	ENST00000555382	DNAJC17	Q9NVM6	304 aa	Known RBP	9.81	□□□□□ -0.84
PRKCH-215	ENST00000555382	AMACR	Q9UHK6	382 aa		9.81	□□□□□ -0.84
PRKCH-215	ENST00000555382	DNAI1	Q9UI46	699 aa		9.81	□□□□□ -0.84
PRKCH-215	ENST00000555382	GGA2	Q9UJY4	613 aa		9.81	□□□□□ -0.84
PRKCH-215	ENST00000555382	RAX	Q9Y2V3	346 aa		9.81	□□□□□ -0.84
PRKCH-215	ENST00000555382	CKAP5	Q14008	2032 aa		9.8	□□□□□ -0.84
PRKCH-215	ENST00000555382	RASA4B	C9J798	803 aa		9.8	□□□□□ -0.84
PRKCH-215	ENST00000555382	PGRMC1	O00264	195 aa	Known RBP	9.8	□□□□□ -0.84
PRKCH-215	ENST00000555382	SCAMP3	O14828	347 aa	Known RBP	9.8	□□□□□ -0.84
PRKCH-215	ENST00000555382	FANCG	O15287	622 aa		9.8	□□□□□ -0.84
PRKCH-215	ENST00000555382	RASA4	O43374	803 aa		9.8	□□□□□ -0.84
PRKCH-215	ENST00000555382	KDELR3	O43731	214 aa		9.8	□□□□□ -0.84
PRKCH-215	ENST00000555382	ZMPSTE24	O75844	475 aa		9.8	□□□□□ -0.84
PRKCH-215	ENST00000555382	KAT7	O95251	611 aa		9.8	□□□□□ -0.84
PRKCH-215	ENST00000555382	APOD	P05090	189 aa		9.8	□□□□□ -0.84
PRKCH-215	ENST00000555382	ATP5B	P06576	529 aa	Known RBP	9.8	□□□□□ -0.84
PRKCH-215	ENST00000555382	RHOC	P08134	193 aa		9.8	□□□□□ -0.84
PRKCH-215	ENST00000555382	SRPRA	P08240	638 aa	Known RBP	9.8	□□□□□ -0.84
PRKCH-215	ENST00000555382	SERPINF2	P08697	491 aa		9.8	□□□□□ -0.84
PRKCH-215	ENST00000555382	TNNT1	P13805	278 aa		9.8	□□□□□ -0.84
PRKCH-215	ENST00000555382	CCNC	P24863	283 aa		9.8	□□□□□ -0.84
PRKCH-215	ENST00000555382	GJC1	P36383	396 aa		9.8	□□□□□ -0.84
PRKCH-215	ENST00000555382	GGCX	P38435	758 aa		9.8	□□□□□ -0.84
PRKCH-215	ENST00000555382	GARS	P41250	739 aa	Known RBP	9.8	□□□□□ -0.84
PRKCH-215	ENST00000555382	CLCN6	P51797	869 aa		9.8	□□□□□ -0.84
PRKCH-215	ENST00000555382	MRPS21	P82921	87 aa	Known RBP	9.8	□□□□□ -0.84
PRKCH-215	ENST00000555382	IL10RB	Q08334	325 aa		9.8	□□□□□ -0.84
PRKCH-215	ENST00000555382	CCNG2	Q16589	344 aa		9.8	□□□□□ -0.84
PRKCH-215	ENST00000555382	CYP1B1	Q16678	543 aa		9.8	□□□□□ -0.84
PRKCH-215	ENST00000555382	C2orf27A	Q580R0	203 aa		9.8	□□□□□ -0.84
PRKCH-215	ENST00000555382	FSCB	Q5H9T9	825 aa		9.8	□□□□□ -0.84
PRKCH-215	ENST00000555382	LYSMD4	Q5XG99	296 aa		9.8	□□□□□ -0.84
PRKCH-215	ENST00000555382	TIGD7	Q6NT04	549 aa	Predicted RBP	9.8	□□□□□ -0.84
PRKCH-215	ENST00000555382	RETSAT	Q6NUM9	610 aa		9.8	□□□□□ -0.84
PRKCH-215	ENST00000555382	SYT10	Q6XYQ8	523 aa		9.8	□□□□□ -0.84
PRKCH-215	ENST00000555382	ZNF572	Q7Z3I7	529 aa	Predicted RBP	9.8	□□□□□ -0.84
PRKCH-215	ENST00000555382	TFAP2D	Q7Z6R9	452 aa		9.8	□□□□□ -0.84
PRKCH-215	ENST00000555382	GLRX5	Q86SX6	157 aa		9.8	□□□□□ -0.84
PRKCH-215	ENST00000555382	C12orf40	Q86WS4	652 aa		9.8	□□□□□ -0.84
PRKCH-215	ENST00000555382	RFX6	Q8HWS3	928 aa		9.8	□□□□□ -0.84
PRKCH-215	ENST00000555382	CCDC50	Q8IVM0	306 aa		9.8	□□□□□ -0.84
PRKCH-215	ENST00000555382	PLPP6	Q8IY26	295 aa		9.8	□□□□□ -0.84
PRKCH-215	ENST00000555382	CARNMT1	Q8N4J0	409 aa		9.8	□□□□□ -0.84
PRKCH-215	ENST00000555382	MINDY1	Q8N5J2	469 aa		9.8	□□□□□ -0.84
PRKCH-215	ENST00000555382	CCDC33	Q8N5R6	958 aa		9.8	□□□□□ -0.84
PRKCH-215	ENST00000555382	NPW	Q8N729	165 aa		9.8	□□□□□ -0.84
PRKCH-215	ENST00000555382	KIF18A	Q8NI77	898 aa		9.8	□□□□□ -0.84
PRKCH-215	ENST00000555382	MDM1	Q8TC05	714 aa		9.8	□□□□□ -0.84
PRKCH-215	ENST00000555382	WFDC5	Q8TCV5	224 aa		9.8	□□□□□ -0.84
PRKCH-215	ENST00000555382	ISG20	Q96AZ6	181 aa	Known RBP	9.8	□□□□□ -0.84
PRKCH-215	ENST00000555382	C16orf45	Q96MC5	204 aa	Predicted RBP	9.8	□□□□□ -0.84
PRKCH-215	ENST00000555382	NDFIP2	Q9NV92	336 aa		9.8	□□□□□ -0.84
PRKCH-215	ENST00000555382	ETNK2	Q9NVF9	386 aa		9.8	□□□□□ -0.84
PRKCH-215	ENST00000555382	KLHL11	Q9NVR0	708 aa		9.8	□□□□□ -0.84
PRKCH-215	ENST00000555382	PLK2	Q9NYY3	685 aa		9.8	□□□□□ -0.84
PRKCH-215	ENST00000555382	DTL	Q9NZJ0	730 aa		9.8	□□□□□ -0.84
PRKCH-215	ENST00000555382	INTS6	Q9UL03	887 aa	Known RBP	9.8	□□□□□ -0.84
PRKCH-215	ENST00000555382	HCN2	Q9UL51	889 aa		9.8	□□□□□ -0.84
PRKCH-215	ENST00000555382	HPCAL4	Q9UM19	191 aa		9.8	□□□□□ -0.84
PRKCH-215	ENST00000555382	SLC6A14	Q9UN76	642 aa		9.8	□□□□□ -0.84
PRKCH-215	ENST00000555382	HS3ST2	Q9Y278	367 aa		9.8	□□□□□ -0.84
PRKCH-215	ENST00000555382	MUC22	E2RYF6	1773 aa	Predicted RBP	9.8	□□□□□ -0.84
PRKCH-215	ENST00000555382		A0A087WV48	116 aa		9.79	□□□□□ -0.84
PRKCH-215	ENST00000555382	PPP1R12A	O14974	1030 aa	Predicted RBP	9.79	□□□□□ -0.84
PRKCH-215	ENST00000555382	CEP104	O60308	925 aa		9.79	□□□□□ -0.84
PRKCH-215	ENST00000555382	PRAMEF11	O60813	436 aa		9.79	□□□□□ -0.84
PRKCH-215	ENST00000555382	DLD	P09622	509 aa	Known RBP	9.79	□□□□□ -0.84
PRKCH-215	ENST00000555382	FTH1P19	P0C7X4	201 aa		9.79	□□□□□ -0.84
PRKCH-215	ENST00000555382	KRT10	P13645	584 aa		9.79	□□□□□ -0.84
PRKCH-215	ENST00000555382	STIP1	P31948	543 aa	Known RBP	9.79	□□□□□ -0.84
PRKCH-215	ENST00000555382	DPP6	P42658	865 aa		9.79	□□□□□ -0.84
PRKCH-215	ENST00000555382	SEC13	P55735	322 aa		9.79	□□□□□ -0.84
PRKCH-215	ENST00000555382	PPID	Q08752	370 aa	Known RBP	9.79	□□□□□ -0.84
PRKCH-215	ENST00000555382	SLC10A2	Q12908	348 aa	Predicted RBP	9.79	□□□□□ -0.84
PRKCH-215	ENST00000555382	ZNF211	Q13398	564 aa	Predicted RBP	9.79	□□□□□ -0.84

Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms