RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 ALDH1A2O94788 518 aa12.86□□□□□ -0.35
SYNE2-219ENST00000555323 APBB3O95704 486 aa12.86□□□□□ -0.35
SYNE2-219ENST00000555323 IGSF6O95976 241 aa12.86□□□□□ -0.35
SYNE2-219ENST00000555323 TDGF1P13385 188 aa12.86□□□□□ -0.35
SYNE2-219ENST00000555323 GABRG2P18507 467 aa12.86□□□□□ -0.35
SYNE2-219ENST00000555323 CHRNA3P32297 505 aa12.86□□□□□ -0.35
SYNE2-219ENST00000555323 MAPK8P45983 427 aa12.86□□□□□ -0.35
SYNE2-219ENST00000555323 RGRP47804 291 aa12.86□□□□□ -0.35
SYNE2-219ENST00000555323 CCNHP51946 323 aaPredicted RBP12.86□□□□□ -0.35
SYNE2-219ENST00000555323 RPS14P62263 151 aaKnown RBP12.86□□□□□ -0.35
SYNE2-219ENST00000555323 ZNF235Q14590 738 aa12.86□□□□□ -0.35
SYNE2-219ENST00000555323 GRM3Q14832 879 aa12.86□□□□□ -0.35
SYNE2-219ENST00000555323 DARS2Q6PI48 645 aaKnown RBP12.86□□□□□ -0.35
SYNE2-219ENST00000555323 NCEH1Q6PIU2 408 aa12.86□□□□□ -0.35
SYNE2-219ENST00000555323 B4GALNT4Q76KP1 1039 aa12.86□□□□□ -0.35
SYNE2-219ENST00000555323 SRLQ86TD4 932 aa12.86□□□□□ -0.35
SYNE2-219ENST00000555323 C12orf50Q8NA57 414 aaPredicted RBP12.86□□□□□ -0.35
SYNE2-219ENST00000555323 CHST14Q8NCH0 376 aa12.86□□□□□ -0.35
SYNE2-219ENST00000555323 TSTD1Q8NFU3 115 aa12.86□□□□□ -0.35
SYNE2-219ENST00000555323 ARRDC2Q8TBH0 407 aa12.86□□□□□ -0.35
SYNE2-219ENST00000555323 HCAR2Q8TDS4 363 aa12.86□□□□□ -0.35
SYNE2-219ENST00000555323 C1orf54Q8WWF1 131 aa12.86□□□□□ -0.35
SYNE2-219ENST00000555323 ATG4AQ8WYN0 398 aa12.86□□□□□ -0.35
SYNE2-219ENST00000555323 SPOCK2Q92563 424 aa12.86□□□□□ -0.35
SYNE2-219ENST00000555323 NELL1Q92832 810 aa12.86□□□□□ -0.35
SYNE2-219ENST00000555323 RTP4Q96DX8 246 aa12.86□□□□□ -0.35
SYNE2-219ENST00000555323 TUBGCP5Q96RT8 1024 aa12.86□□□□□ -0.35
SYNE2-219ENST00000555323 FAM118BQ9BPY3 351 aa12.86□□□□□ -0.35
SYNE2-219ENST00000555323 LRFN3Q9BTN0 628 aa12.86□□□□□ -0.35
SYNE2-219ENST00000555323 TM6SF2Q9BZW4 377 aa12.86□□□□□ -0.35
SYNE2-219ENST00000555323 POLR1EQ9GZS1 481 aaKnown RBP12.86□□□□□ -0.35
SYNE2-219ENST00000555323 WASF2Q9Y6W5 498 aa12.86□□□□□ -0.35
SYNE2-219ENST00000555323 CKAP5Q14008 2032 aa12.86□□□□□ -0.35
SYNE2-219ENST00000555323 TCRBV21S2A2A0A5A6 115 aa12.85□□□□□ -0.35
SYNE2-219ENST00000555323 INSIG1O15503 277 aa12.85□□□□□ -0.35
SYNE2-219ENST00000555323 KCNN4O15554 427 aa12.85□□□□□ -0.35
SYNE2-219ENST00000555323 ZBTB24O43167 697 aaPredicted RBP12.85□□□□□ -0.35
SYNE2-219ENST00000555323 LAMTOR5O43504 91 aa12.85□□□□□ -0.35
SYNE2-219ENST00000555323 RNASEH1O60930 286 aaKnown RBP12.85□□□□□ -0.35
SYNE2-219ENST00000555323 GCATO75600 419 aa12.85□□□□□ -0.35
SYNE2-219ENST00000555323 PRNPP04156 253 aa12.85□□□□□ -0.35
SYNE2-219ENST00000555323 HLA-DQB2P05538 268 aa12.85□□□□□ -0.35
SYNE2-219ENST00000555323 CTSLP07711 333 aa12.85□□□□□ -0.35
SYNE2-219ENST00000555323 CD68P34810 354 aaPredicted RBP12.85□□□□□ -0.35
SYNE2-219ENST00000555323 PAFAH1B1P43034 410 aa12.85□□□□□ -0.35
SYNE2-219ENST00000555323 AP1S1P61966 158 aa12.85□□□□□ -0.35
SYNE2-219ENST00000555323 RAD51Q06609 339 aa12.85□□□□□ -0.35
SYNE2-219ENST00000555323 TUBB2AQ13885 445 aa12.85□□□□□ -0.35
SYNE2-219ENST00000555323 ARSIQ5FYB1 569 aa12.85□□□□□ -0.35
SYNE2-219ENST00000555323 ATXN7L2Q5T6C5 722 aaPredicted RBP12.85□□□□□ -0.35
SYNE2-219ENST00000555323 FAM46CQ5VWP2 391 aa12.85□□□□□ -0.35
SYNE2-219ENST00000555323 PID1Q7Z2X4 250 aa12.85□□□□□ -0.35
SYNE2-219ENST00000555323 DSG4Q86SJ6 1040 aa12.85□□□□□ -0.35
SYNE2-219ENST00000555323 ZNF567Q8N184 647 aa12.85□□□□□ -0.35
SYNE2-219ENST00000555323 MDGA1Q8NFP4 955 aa12.85□□□□□ -0.35
SYNE2-219ENST00000555323 ATL2Q8NHH9 583 aa12.85□□□□□ -0.35
SYNE2-219ENST00000555323 FAM131CQ96AQ9 280 aa12.85□□□□□ -0.35
SYNE2-219ENST00000555323 TADA1Q96BN2 335 aa12.85□□□□□ -0.35
SYNE2-219ENST00000555323 NSMCE3Q96MG7 304 aa12.85□□□□□ -0.35
SYNE2-219ENST00000555323 ZNF641Q96N77 438 aaPredicted RBP12.85□□□□□ -0.35
SYNE2-219ENST00000555323 TMEM121Q9BTD3 319 aa12.85□□□□□ -0.35
SYNE2-219ENST00000555323 TUBB2BQ9BVA1 445 aa12.85□□□□□ -0.35
SYNE2-219ENST00000555323 OSBPL1AQ9BXW6 950 aa12.85□□□□□ -0.35
SYNE2-219ENST00000555323 SLC25A51Q9H1U9 297 aa12.85□□□□□ -0.35
SYNE2-219ENST00000555323 C10orf88Q9H8K7 445 aa12.85□□□□□ -0.35
SYNE2-219ENST00000555323 NT5MQ9NPB1 228 aa12.85□□□□□ -0.35
SYNE2-219ENST00000555323 ITM2CQ9NQX7 267 aa12.85□□□□□ -0.35
SYNE2-219ENST00000555323 SMARCAL1Q9NZC9 954 aa12.85□□□□□ -0.35
SYNE2-219ENST00000555323 IL36AQ9UHA7 158 aa12.85□□□□□ -0.35
SYNE2-219ENST00000555323 EVLQ9UI08 416 aaPredicted RBP12.85□□□□□ -0.35
SYNE2-219ENST00000555323 SARDHQ9UL12 918 aa12.85□□□□□ -0.35
SYNE2-219ENST00000555323 ZDBF2Q9HCK1 2354 aa12.84□□□□□ -0.35
SYNE2-219ENST00000555323 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.84□□□□□ -0.35
SYNE2-219ENST00000555323 RNF103O00237 685 aa12.84□□□□□ -0.35
SYNE2-219ENST00000555323 PDE2AO00408 941 aaPredicted RBP12.84□□□□□ -0.35
SYNE2-219ENST00000555323 KRIT1O00522 736 aa12.84□□□□□ -0.35
SYNE2-219ENST00000555323 LEFTY1O75610 366 aa12.84□□□□□ -0.35
SYNE2-219ENST00000555323 IGLV3-19P01714 112 aa12.84□□□□□ -0.35
SYNE2-219ENST00000555323 NDUFV2P19404 249 aa12.84□□□□□ -0.35
SYNE2-219ENST00000555323 C5AR1P21730 350 aa12.84□□□□□ -0.35
SYNE2-219ENST00000555323 SCNN1BP51168 640 aa12.84□□□□□ -0.35
SYNE2-219ENST00000555323 MAXP61244 160 aa12.84□□□□□ -0.35
SYNE2-219ENST00000555323 NIPAL4Q0D2K0 466 aa12.84□□□□□ -0.35
SYNE2-219ENST00000555323 CST6Q15828 149 aa12.84□□□□□ -0.35
SYNE2-219ENST00000555323 SLC14A2Q15849 920 aa12.84□□□□□ -0.35
SYNE2-219ENST00000555323 P3H1Q32P28 736 aa12.84□□□□□ -0.35
SYNE2-219ENST00000555323 ZNF528Q3MIS6 628 aa12.84□□□□□ -0.35
SYNE2-219ENST00000555323 ANKRD20A2Q5SQ80 823 aa12.84□□□□□ -0.35
SYNE2-219ENST00000555323 ANKRD20A1Q5TYW2 823 aa12.84□□□□□ -0.35
SYNE2-219ENST00000555323 ANKRD20A3Q5VUR7 823 aa12.84□□□□□ -0.35
SYNE2-219ENST00000555323 ZNF776Q68DI1 518 aaPredicted RBP12.84□□□□□ -0.35
SYNE2-219ENST00000555323 ZNF572Q7Z3I7 529 aaPredicted RBP12.84□□□□□ -0.35
SYNE2-219ENST00000555323 MMAAQ8IVH4 418 aaKnown RBP12.84□□□□□ -0.35
SYNE2-219ENST00000555323 KLHDC8BQ8IXV7 354 aa12.84□□□□□ -0.35
SYNE2-219ENST00000555323 KIF18AQ8NI77 898 aa12.84□□□□□ -0.35
SYNE2-219ENST00000555323 PRCCQ92733 491 aaPredicted RBP12.84□□□□□ -0.35
SYNE2-219ENST00000555323 MAGOHBQ96A72 148 aaKnown RBP12.84□□□□□ -0.35
SYNE2-219ENST00000555323 ECHDC3Q96DC8 303 aa12.84□□□□□ -0.35
SYNE2-219ENST00000555323 SIPA1Q96FS4 1042 aa12.84□□□□□ -0.35
SYNE2-219ENST00000555323 IMP4Q96G21 291 aaKnown RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms