RNA–Protein interactions for RNA: ENST00000555252.5

MTHFD1-210, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 1 (best)

Gene MTHFD1, Length 2,053 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-210ENST00000555252 SMIM28A0A1B0GU29 152 aa10.83□□□□□ -0.68
MTHFD1-210ENST00000555252 TCRBV3S1A0A5B6 114 aa10.83□□□□□ -0.68
MTHFD1-210ENST00000555252 ADCY6O43306 1168 aa10.83□□□□□ -0.68
MTHFD1-210ENST00000555252 HUS1O60921 280 aa10.83□□□□□ -0.68
MTHFD1-210ENST00000555252 E2F6O75461 281 aa10.83□□□□□ -0.68
MTHFD1-210ENST00000555252 SERPINB7O75635 380 aa10.83□□□□□ -0.68
MTHFD1-210ENST00000555252 VAPBO95292 243 aa10.83□□□□□ -0.68
MTHFD1-210ENST00000555252 SMIM10L2AP0DMW4 78 aa10.83□□□□□ -0.68
MTHFD1-210ENST00000555252 SMIM10L2BP0DMW5 78 aa10.83□□□□□ -0.68
MTHFD1-210ENST00000555252 ENO3P13929 434 aaPredicted RBP10.83□□□□□ -0.68
MTHFD1-210ENST00000555252 EPHA3P29320 983 aa10.83□□□□□ -0.68
MTHFD1-210ENST00000555252 MAGEA10P43363 369 aaPredicted RBP10.83□□□□□ -0.68
MTHFD1-210ENST00000555252 GLUD2P49448 558 aa10.83□□□□□ -0.68
MTHFD1-210ENST00000555252 AIF1P55008 147 aa10.83□□□□□ -0.68
MTHFD1-210ENST00000555252 CSE1LP55060 971 aaKnown RBP10.83□□□□□ -0.68
MTHFD1-210ENST00000555252 SLC10A2Q12908 348 aaPredicted RBP10.83□□□□□ -0.68
MTHFD1-210ENST00000555252 MPP3Q13368 585 aa10.83□□□□□ -0.68
MTHFD1-210ENST00000555252 PTK2BQ14289 1009 aa10.83□□□□□ -0.68
MTHFD1-210ENST00000555252 C16orf72Q14CZ0 275 aa10.83□□□□□ -0.68
MTHFD1-210ENST00000555252 PDK1Q15118 436 aa10.83□□□□□ -0.68
MTHFD1-210ENST00000555252 CCDC92Q53HC0 331 aaPredicted RBP10.83□□□□□ -0.68
MTHFD1-210ENST00000555252 LIPMQ5VYY2 423 aa10.83□□□□□ -0.68
MTHFD1-210ENST00000555252 PPP4R4Q6NUP7 873 aa10.83□□□□□ -0.68
MTHFD1-210ENST00000555252 ELMSAN1Q6PJG2 1045 aa10.83□□□□□ -0.68
MTHFD1-210ENST00000555252 PLEKHH3Q7Z736 793 aa10.83□□□□□ -0.68
MTHFD1-210ENST00000555252 FIBCD1Q8N539 461 aa10.83□□□□□ -0.68
MTHFD1-210ENST00000555252 DDHD1Q8NEL9 900 aa10.83□□□□□ -0.68
MTHFD1-210ENST00000555252 KCTD13Q8WZ19 329 aa10.83□□□□□ -0.68
MTHFD1-210ENST00000555252 PBXIP1Q96AQ6 731 aa10.83□□□□□ -0.68
MTHFD1-210ENST00000555252 CERS2Q96G23 380 aa10.83□□□□□ -0.68
MTHFD1-210ENST00000555252 UNC93B1Q9H1C4 597 aa10.83□□□□□ -0.68
MTHFD1-210ENST00000555252 CAAP1Q9H8G2 361 aa10.83□□□□□ -0.68
MTHFD1-210ENST00000555252 COQ10BQ9H8M1 238 aa10.83□□□□□ -0.68
MTHFD1-210ENST00000555252 STAP1Q9ULZ2 295 aa10.83□□□□□ -0.68
MTHFD1-210ENST00000555252 B3GNT3Q9Y2A9 372 aa10.83□□□□□ -0.68
MTHFD1-210ENST00000555252 FADS3Q9Y5Q0 445 aa10.83□□□□□ -0.68
MTHFD1-210ENST00000555252 RAD54BQ9Y620 910 aa10.83□□□□□ -0.68
MTHFD1-210ENST00000555252 CCL15-CCL14A0A0B4J2E2 113 aa10.83□□□□□ -0.68
MTHFD1-210ENST00000555252 TIMM44O43615 452 aa10.83□□□□□ -0.68
MTHFD1-210ENST00000555252 CABYRO75952 493 aa10.83□□□□□ -0.68
MTHFD1-210ENST00000555252 F2P00734 622 aa10.83□□□□□ -0.68
MTHFD1-210ENST00000555252 ALDH2P05091 517 aa10.83□□□□□ -0.68
MTHFD1-210ENST00000555252 PDGFRBP09619 1106 aa10.83□□□□□ -0.68
MTHFD1-210ENST00000555252 TFE3P19532 575 aaPredicted RBP10.83□□□□□ -0.68
MTHFD1-210ENST00000555252 NOS2P35228 1153 aa10.83□□□□□ -0.68
MTHFD1-210ENST00000555252 SULT1E1P49888 294 aa10.83□□□□□ -0.68
MTHFD1-210ENST00000555252 NDST2P52849 883 aa10.83□□□□□ -0.68
MTHFD1-210ENST00000555252 NSUN2Q08J23 767 aaKnown RBP eCLIP10.83□□□□□ -0.68
MTHFD1-210ENST00000555252 STX5Q13190 355 aa10.83□□□□□ -0.68
MTHFD1-210ENST00000555252 CCL15Q16663 113 aa10.83□□□□□ -0.68
MTHFD1-210ENST00000555252 C9orf131Q5VYM1 1079 aa10.83□□□□□ -0.68
MTHFD1-210ENST00000555252 CASC4Q6P4E1 433 aa10.83□□□□□ -0.68
MTHFD1-210ENST00000555252 PAOXQ6QHF9 649 aa10.83□□□□□ -0.68
MTHFD1-210ENST00000555252 PDZD4Q76G19 769 aaPredicted RBP10.83□□□□□ -0.68
MTHFD1-210ENST00000555252 CCDC185Q8N715 623 aa10.83□□□□□ -0.68
MTHFD1-210ENST00000555252 GOLM1Q8NBJ4 401 aa10.83□□□□□ -0.68
MTHFD1-210ENST00000555252 SLC2A14Q8TDB8 520 aa10.83□□□□□ -0.68
MTHFD1-210ENST00000555252 CLEC4CQ8WTT0 213 aa10.83□□□□□ -0.68
MTHFD1-210ENST00000555252 ARNTL2Q8WYA1 636 aa10.83□□□□□ -0.68
MTHFD1-210ENST00000555252 OSMRQ99650 979 aa10.83□□□□□ -0.68
MTHFD1-210ENST00000555252 DUSP16Q9BY84 665 aa10.83□□□□□ -0.68
MTHFD1-210ENST00000555252 OXCT2Q9BYC2 517 aaPredicted RBP10.83□□□□□ -0.68
MTHFD1-210ENST00000555252 NXF3Q9H4D5 531 aaKnown RBP10.83□□□□□ -0.68
MTHFD1-210ENST00000555252 MAN1C1Q9NR34 630 aa10.83□□□□□ -0.68
MTHFD1-210ENST00000555252 ZNF232Q9UNY5 417 aa10.83□□□□□ -0.68
MTHFD1-210ENST00000555252 GINS2Q9Y248 185 aa10.83□□□□□ -0.68
MTHFD1-210ENST00000555252 ZNF711Q9Y462 761 aa10.83□□□□□ -0.68
MTHFD1-210ENST00000555252 MYOCOSA0A1B0GUC4 107 aa10.82□□□□□ -0.68
MTHFD1-210ENST00000555252 TRPC5OSA6NMA1 111 aa10.82□□□□□ -0.68
MTHFD1-210ENST00000555252 C9IYK1 514 aa10.82□□□□□ -0.68
MTHFD1-210ENST00000555252 HTRA2O43464 458 aaPredicted RBP10.82□□□□□ -0.68
MTHFD1-210ENST00000555252 BMP2P12643 396 aa10.82□□□□□ -0.68
MTHFD1-210ENST00000555252 DCKP27707 260 aa10.82□□□□□ -0.68
MTHFD1-210ENST00000555252 KCNC4Q03721 635 aa10.82□□□□□ -0.68
MTHFD1-210ENST00000555252 GLRA4Q5JXX5 417 aa10.82□□□□□ -0.68
MTHFD1-210ENST00000555252 INTS11Q5TA45 600 aaKnown RBP10.82□□□□□ -0.68
MTHFD1-210ENST00000555252 IL23RQ5VWK5 629 aa10.82□□□□□ -0.68
MTHFD1-210ENST00000555252 NIPAL1Q6NVV3 410 aa10.82□□□□□ -0.68
MTHFD1-210ENST00000555252 ZYG11AQ6WRX3 759 aa10.82□□□□□ -0.68
MTHFD1-210ENST00000555252 HACD2Q6Y1H2 254 aa10.82□□□□□ -0.68
MTHFD1-210ENST00000555252 DEFB106AQ8N104 65 aa10.82□□□□□ -0.68
MTHFD1-210ENST00000555252 DCLK2Q8N568 766 aa10.82□□□□□ -0.68
MTHFD1-210ENST00000555252 ZNF513Q8N8E2 541 aaPredicted RBP10.82□□□□□ -0.68
MTHFD1-210ENST00000555252 COLGALT1Q8NBJ5 622 aa10.82□□□□□ -0.68
MTHFD1-210ENST00000555252 TFAP2CQ92754 450 aa10.82□□□□□ -0.68
MTHFD1-210ENST00000555252 TMIGD2Q96BF3 282 aa10.82□□□□□ -0.68
MTHFD1-210ENST00000555252 C12orf43Q96C57 262 aaKnown RBP10.82□□□□□ -0.68
MTHFD1-210ENST00000555252 MAELQ96JY0 434 aaKnown RBP10.82□□□□□ -0.68
MTHFD1-210ENST00000555252 SLC9A7Q96T83 725 aa10.82□□□□□ -0.68
MTHFD1-210ENST00000555252 SLX1AQ9BQ83 275 aa10.82□□□□□ -0.68
MTHFD1-210ENST00000555252 TUBA1CQ9BQE3 449 aa10.82□□□□□ -0.68
MTHFD1-210ENST00000555252 GATA5Q9BWX5 397 aaPredicted RBP10.82□□□□□ -0.68
MTHFD1-210ENST00000555252 TDRD1Q9BXT4 1180 aaKnown RBP10.82□□□□□ -0.68
MTHFD1-210ENST00000555252 YTHDF1Q9BYJ9 559 aaKnown RBP10.82□□□□□ -0.68
MTHFD1-210ENST00000555252 CXCL16Q9H2A7 254 aa10.82□□□□□ -0.68
MTHFD1-210ENST00000555252 NMRAL1Q9HBL8 299 aa10.82□□□□□ -0.68
MTHFD1-210ENST00000555252 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.82□□□□□ -0.68
MTHFD1-210ENST00000555252 MAP3K6O95382 1288 aa10.81□□□□□ -0.68
MTHFD1-210ENST00000555252 STAMBPO95630 424 aa10.81□□□□□ -0.68
MTHFD1-210ENST00000555252 GOT1P17174 413 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms