RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 ZNF783Q6ZMS7 281 aa10.93□□□□□ -0.66
TDP1-211ENST00000555178 ZNF534Q76KX8 674 aa10.93□□□□□ -0.66
TDP1-211ENST00000555178 LRRC49Q8IUZ0 686 aa10.93□□□□□ -0.66
TDP1-211ENST00000555178 PPIL6Q8IXY8 311 aa10.93□□□□□ -0.66
TDP1-211ENST00000555178 AGGF1Q8N302 714 aaeCLIP10.93□□□□□ -0.66
TDP1-211ENST00000555178 TEX26Q8N6G2 289 aa10.93□□□□□ -0.66
TDP1-211ENST00000555178 RBM15Q96T37 977 aaKnown RBP eCLIP10.93□□□□□ -0.66
TDP1-211ENST00000555178 APOL2Q9BQE5 337 aa10.93□□□□□ -0.66
TDP1-211ENST00000555178 FERMT1Q9BQL6 677 aa10.93□□□□□ -0.66
TDP1-211ENST00000555178 RETREG1Q9H6L5 497 aa10.93□□□□□ -0.66
TDP1-211ENST00000555178 GLOD4Q9HC38 313 aa10.93□□□□□ -0.66
TDP1-211ENST00000555178 DUSP12Q9UNI6 340 aa10.93□□□□□ -0.66
TDP1-211ENST00000555178 FAM50BQ9Y247 325 aa10.93□□□□□ -0.66
TDP1-211ENST00000555178 TECTAO75443 2155 aa10.93□□□□□ -0.66
TDP1-211ENST00000555178 NUMA1Q14980 2115 aa10.92□□□□□ -0.66
TDP1-211ENST00000555178 MTSS1O43312 755 aa10.92□□□□□ -0.66
TDP1-211ENST00000555178 BNIP3LO60238 219 aa10.92□□□□□ -0.66
TDP1-211ENST00000555178 RENBPP51606 427 aa10.92□□□□□ -0.66
TDP1-211ENST00000555178 ECT2LQ008S8 904 aa10.92□□□□□ -0.66
TDP1-211ENST00000555178 MORF4L2Q15014 288 aa10.92□□□□□ -0.66
TDP1-211ENST00000555178 BRD3Q15059 726 aa10.92□□□□□ -0.66
TDP1-211ENST00000555178 FNBP1LQ5T0N5 605 aa10.92□□□□□ -0.66
TDP1-211ENST00000555178 TPRG1Q6ZUI0 275 aa10.92□□□□□ -0.66
TDP1-211ENST00000555178 MICALCLQ6ZW33 695 aa10.92□□□□□ -0.66
TDP1-211ENST00000555178 KDELC2Q7Z4H8 507 aa10.92□□□□□ -0.66
TDP1-211ENST00000555178 CCDC117Q8IWD4 279 aaPredicted RBP10.92□□□□□ -0.66
TDP1-211ENST00000555178 AHI1Q8N157 1196 aa10.92□□□□□ -0.66
TDP1-211ENST00000555178 SH2D3CQ8N5H7 860 aa10.92□□□□□ -0.66
TDP1-211ENST00000555178 ARRDC2Q8TBH0 407 aa10.92□□□□□ -0.66
TDP1-211ENST00000555178 ATXN2LQ8WWM7 1075 aaKnown RBP10.92□□□□□ -0.66
TDP1-211ENST00000555178 P2RY13Q9BPV8 354 aa10.92□□□□□ -0.66
TDP1-211ENST00000555178 WDR83Q9BRX9 315 aaKnown RBP10.92□□□□□ -0.66
TDP1-211ENST00000555178 TRPV5Q9NQA5 729 aa10.92□□□□□ -0.66
TDP1-211ENST00000555178 SLC2A4RGQ9NR83 387 aa10.92□□□□□ -0.66
TDP1-211ENST00000555178 ZNF446Q9NWS9 450 aa10.92□□□□□ -0.66
TDP1-211ENST00000555178 C2orf42Q9NWW7 574 aa10.92□□□□□ -0.66
TDP1-211ENST00000555178 PRKAG3Q9UGI9 489 aa10.92□□□□□ -0.66
TDP1-211ENST00000555178 TRHDEQ9UKU6 1024 aa10.92□□□□□ -0.66
TDP1-211ENST00000555178 HPCAL4Q9UM19 191 aa10.92□□□□□ -0.66
TDP1-211ENST00000555178 ATP8A1Q9Y2Q0 1164 aa10.92□□□□□ -0.66
TDP1-211ENST00000555178 NEBLO76041 1014 aa10.92□□□□□ -0.66
TDP1-211ENST00000555178 POLR2EP19388 210 aaKnown RBP10.92□□□□□ -0.66
TDP1-211ENST00000555178 PRKCHP24723 683 aa10.92□□□□□ -0.66
TDP1-211ENST00000555178 IL12RB1P42701 662 aa10.92□□□□□ -0.66
TDP1-211ENST00000555178 TNNT3P45378 269 aaPredicted RBP10.92□□□□□ -0.66
TDP1-211ENST00000555178 SERPINH1P50454 418 aaKnown RBP10.92□□□□□ -0.66
TDP1-211ENST00000555178 METAP1P53582 386 aa10.92□□□□□ -0.66
TDP1-211ENST00000555178 ZNF234Q14588 700 aa10.92□□□□□ -0.66
TDP1-211ENST00000555178 ZNF235Q14590 738 aa10.92□□□□□ -0.66
TDP1-211ENST00000555178 DLG2Q15700 870 aa10.92□□□□□ -0.66
TDP1-211ENST00000555178 PARP6Q2NL67 630 aa10.92□□□□□ -0.66
TDP1-211ENST00000555178 Q6ZVU0 165 aa10.92□□□□□ -0.66
TDP1-211ENST00000555178 PRPF39Q86UA1 669 aaKnown RBP10.92□□□□□ -0.66
TDP1-211ENST00000555178 ZNF687Q8N1G0 1237 aa10.92□□□□□ -0.66
TDP1-211ENST00000555178 ATP11CQ8NB49 1132 aa10.92□□□□□ -0.66
TDP1-211ENST00000555178 CHST14Q8NCH0 376 aa10.92□□□□□ -0.66
TDP1-211ENST00000555178 FRS2Q8WU20 508 aa10.92□□□□□ -0.66
TDP1-211ENST00000555178 VAT1Q99536 393 aa10.92□□□□□ -0.66
TDP1-211ENST00000555178 CACNA2D2Q9NY47 1150 aa10.92□□□□□ -0.66
TDP1-211ENST00000555178 NDRG2Q9UN36 371 aaKnown RBP10.92□□□□□ -0.66
TDP1-211ENST00000555178 SORCS3Q9UPU3 1222 aa10.92□□□□□ -0.66
TDP1-211ENST00000555178 SHOC2Q9UQ13 582 aa10.92□□□□□ -0.66
TDP1-211ENST00000555178 A0A0U1RQS6 177 aa10.91□□□□□ -0.66
TDP1-211ENST00000555178 E7EVH7 732 aa10.91□□□□□ -0.66
TDP1-211ENST00000555178 MCM3P25205 808 aa10.91□□□□□ -0.66
TDP1-211ENST00000555178 TIE1P35590 1138 aa10.91□□□□□ -0.66
TDP1-211ENST00000555178 CD86P42081 329 aa10.91□□□□□ -0.66
TDP1-211ENST00000555178 KIR2DL1P43626 348 aaPredicted RBP10.91□□□□□ -0.66
TDP1-211ENST00000555178 SLC12A1Q13621 1099 aa10.91□□□□□ -0.66
TDP1-211ENST00000555178 PCSK7Q16549 785 aa10.91□□□□□ -0.66
TDP1-211ENST00000555178 LRRK1Q38SD2 2015 aa10.91□□□□□ -0.66
TDP1-211ENST00000555178 C2orf27AQ580R0 203 aa10.91□□□□□ -0.66
TDP1-211ENST00000555178 TMEM196Q5HYL7 178 aa10.91□□□□□ -0.66
TDP1-211ENST00000555178 TMC3Q7Z5M5 1100 aa10.91□□□□□ -0.66
TDP1-211ENST00000555178 CAND1Q86VP6 1230 aaKnown RBP10.91□□□□□ -0.66
TDP1-211ENST00000555178 ZCCHC9Q8N567 271 aaKnown RBP10.91□□□□□ -0.66
TDP1-211ENST00000555178 NSMCE1Q8WV22 266 aa10.91□□□□□ -0.66
TDP1-211ENST00000555178 DNASE1L2Q92874 299 aa10.91□□□□□ -0.66
TDP1-211ENST00000555178 FATE1Q969F0 183 aa10.91□□□□□ -0.66
TDP1-211ENST00000555178 SERPINB12Q96P63 405 aa10.91□□□□□ -0.66
TDP1-211ENST00000555178 SEMA3CQ99985 751 aa10.91□□□□□ -0.66
TDP1-211ENST00000555178 TRIM56Q9BRZ2 755 aaKnown RBP10.91□□□□□ -0.66
TDP1-211ENST00000555178 C2orf49Q9BVC5 232 aaPredicted RBP10.91□□□□□ -0.66
TDP1-211ENST00000555178 CINPQ9BW66 212 aaPredicted RBP10.91□□□□□ -0.66
TDP1-211ENST00000555178 FOXQ1Q9C009 403 aa10.91□□□□□ -0.66
TDP1-211ENST00000555178 NOD2Q9HC29 1040 aa10.91□□□□□ -0.66
TDP1-211ENST00000555178 HS3ST2Q9Y278 367 aa10.91□□□□□ -0.66
TDP1-211ENST00000555178 PMPCBO75439 489 aa10.9□□□□□ -0.66
TDP1-211ENST00000555178 PDGFBP01127 241 aaPredicted RBP10.9□□□□□ -0.66
TDP1-211ENST00000555178 DLDP09622 509 aaKnown RBP10.9□□□□□ -0.66
TDP1-211ENST00000555178 HNRNPLP14866 589 aaKnown RBP eCLIP10.9□□□□□ -0.66
TDP1-211ENST00000555178 CR2P20023 1033 aa10.9□□□□□ -0.66
TDP1-211ENST00000555178 FDFT1P37268 417 aa10.9□□□□□ -0.66
TDP1-211ENST00000555178 GRIA2P42262 883 aa10.9□□□□□ -0.66
TDP1-211ENST00000555178 MAGEA6P43360 314 aa10.9□□□□□ -0.66
TDP1-211ENST00000555178 LMAN1P49257 510 aa10.9□□□□□ -0.66
TDP1-211ENST00000555178 CRADDP78560 199 aa10.9□□□□□ -0.66
TDP1-211ENST00000555178 DHX9Q08211 1270 aaKnown RBP10.9□□□□□ -0.66
TDP1-211ENST00000555178 FZD5Q13467 585 aa10.9□□□□□ -0.66
TDP1-211ENST00000555178 ACCSLQ4AC99 568 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms