RNA–Protein interactions for RNA: ENST00000554803.5

SRP54-205, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-205ENST00000554803 CREB5Q02930 508 aa11.34□□□□□ -0.59
SRP54-205ENST00000554803 SLC34A1Q06495 639 aa11.34□□□□□ -0.59
SRP54-205ENST00000554803 FASTKD3Q14CZ7 662 aaKnown RBP11.34□□□□□ -0.59
SRP54-205ENST00000554803 MUM1Q2TAK8 710 aa11.34□□□□□ -0.59
SRP54-205ENST00000554803 BBS9Q3SYG4 887 aa11.34□□□□□ -0.59
SRP54-205ENST00000554803 PTPN20Q4JDL3 420 aa11.34□□□□□ -0.59
SRP54-205ENST00000554803 CD300LGQ6UXG3 332 aa11.34□□□□□ -0.59
SRP54-205ENST00000554803 SH2D5Q6ZV89 423 aa11.34□□□□□ -0.59
SRP54-205ENST00000554803 NET1Q7Z628 596 aaPredicted RBP11.34□□□□□ -0.59
SRP54-205ENST00000554803 MTDHQ86UE4 582 aaKnown RBP11.34□□□□□ -0.59
SRP54-205ENST00000554803 RALGPS2Q86X27 583 aaPredicted RBP11.34□□□□□ -0.59
SRP54-205ENST00000554803 XYLT1Q86Y38 959 aa11.34□□□□□ -0.59
SRP54-205ENST00000554803 RFX6Q8HWS3 928 aa11.34□□□□□ -0.59
SRP54-205ENST00000554803 ARHGAP18Q8N392 663 aa11.34□□□□□ -0.59
SRP54-205ENST00000554803 WDTC1Q8N5D0 677 aa11.34□□□□□ -0.59
SRP54-205ENST00000554803 LRRC52Q8N7C0 313 aa11.34□□□□□ -0.59
SRP54-205ENST00000554803 DEFB124Q8NES8 71 aa11.34□□□□□ -0.59
SRP54-205ENST00000554803 CCDC110Q8TBZ0 833 aa11.34□□□□□ -0.59
SRP54-205ENST00000554803 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.34□□□□□ -0.59
SRP54-205ENST00000554803 STON2Q8WXE9 905 aa11.34□□□□□ -0.59
SRP54-205ENST00000554803 OXNAD1Q96HP4 312 aaPredicted RBP11.34□□□□□ -0.59
SRP54-205ENST00000554803 ZSWIM3Q96MP5 696 aa11.34□□□□□ -0.59
SRP54-205ENST00000554803 PWWP2AQ96N64 755 aa11.34□□□□□ -0.59
SRP54-205ENST00000554803 NR1H4Q96RI1 486 aaPredicted RBP11.34□□□□□ -0.59
SRP54-205ENST00000554803 FERMT1Q9BQL6 677 aa11.34□□□□□ -0.59
SRP54-205ENST00000554803 ZNF670Q9BS34 389 aa11.34□□□□□ -0.59
SRP54-205ENST00000554803 FAM192AQ9GZU8 254 aa11.34□□□□□ -0.59
SRP54-205ENST00000554803 NPHS2Q9NP85 383 aa11.34□□□□□ -0.59
SRP54-205ENST00000554803 SLCO1B3Q9NPD5 702 aa11.34□□□□□ -0.59
SRP54-205ENST00000554803 SPATS2LQ9NUQ6 558 aaKnown RBP11.34□□□□□ -0.59
SRP54-205ENST00000554803 SLC38A7Q9NVC3 462 aa11.34□□□□□ -0.59
SRP54-205ENST00000554803 GGT7Q9UJ14 662 aa11.34□□□□□ -0.59
SRP54-205ENST00000554803 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.34□□□□□ -0.59
SRP54-205ENST00000554803 CDY1Q9Y6F8 540 aa11.34□□□□□ -0.59
SRP54-205ENST00000554803 CEP192Q8TEP8 1941 aa11.34□□□□□ -0.59
SRP54-205ENST00000554803 PTPRBP23467 1997 aa11.34□□□□□ -0.59
SRP54-205ENST00000554803 DENND4CQ5VZ89 1909 aa11.33□□□□□ -0.6
SRP54-205ENST00000554803 A0A1W2PPM1 405 aa11.33□□□□□ -0.6
SRP54-205ENST00000554803 TCRBV9S1A1TA0A576 114 aa11.33□□□□□ -0.6
SRP54-205ENST00000554803 HEPACAM2A8MVW5 462 aa11.33□□□□□ -0.6
SRP54-205ENST00000554803 MDM4O15151 490 aa11.33□□□□□ -0.6
SRP54-205ENST00000554803 AHCYL1O43865 530 aa11.33□□□□□ -0.6
SRP54-205ENST00000554803 PRPSAP2O60256 369 aa11.33□□□□□ -0.6
SRP54-205ENST00000554803 FKBP6O75344 327 aa11.33□□□□□ -0.6
SRP54-205ENST00000554803 RHOBTB1O94844 696 aa11.33□□□□□ -0.6
SRP54-205ENST00000554803 DLDP09622 509 aaKnown RBP11.33□□□□□ -0.6
SRP54-205ENST00000554803 ZSCAN5DPP0CG00 497 aa11.33□□□□□ -0.6
SRP54-205ENST00000554803 GPD1P21695 349 aa11.33□□□□□ -0.6
SRP54-205ENST00000554803 FGFR3P22607 806 aa11.33□□□□□ -0.6
SRP54-205ENST00000554803 EPHB2P29323 1055 aa11.33□□□□□ -0.6
SRP54-205ENST00000554803 CTHP32929 405 aa11.33□□□□□ -0.6
SRP54-205ENST00000554803 PPARDQ03181 441 aa11.33□□□□□ -0.6
SRP54-205ENST00000554803 INCA1Q0VD86 236 aa11.33□□□□□ -0.6
SRP54-205ENST00000554803 WASHC5Q12768 1159 aa11.33□□□□□ -0.6
SRP54-205ENST00000554803 PON2Q15165 354 aa11.33□□□□□ -0.6
SRP54-205ENST00000554803 UPP1Q16831 310 aa11.33□□□□□ -0.6
SRP54-205ENST00000554803 ATP13A4Q4VNC1 1196 aa11.33□□□□□ -0.6
SRP54-205ENST00000554803 FNBP1LQ5T0N5 605 aa11.33□□□□□ -0.6
SRP54-205ENST00000554803 PKN3Q6P5Z2 889 aa11.33□□□□□ -0.6
SRP54-205ENST00000554803 AAGABQ6PD74 315 aa11.33□□□□□ -0.6
SRP54-205ENST00000554803 DARS2Q6PI48 645 aaKnown RBP11.33□□□□□ -0.6
SRP54-205ENST00000554803 PDZD4Q76G19 769 aaPredicted RBP11.33□□□□□ -0.6
SRP54-205ENST00000554803 CRLF3Q8IUI8 442 aa11.33□□□□□ -0.6
SRP54-205ENST00000554803 PSTKQ8IV42 348 aaKnown RBP11.33□□□□□ -0.6
SRP54-205ENST00000554803 GLIS1Q8NBF1 620 aa11.33□□□□□ -0.6
SRP54-205ENST00000554803 ZSCAN18Q8TBC5 510 aaPredicted RBP11.33□□□□□ -0.6
SRP54-205ENST00000554803 SPATA18Q8TC71 538 aa11.33□□□□□ -0.6
SRP54-205ENST00000554803 ATP2A3Q93084 1043 aa11.33□□□□□ -0.6
SRP54-205ENST00000554803 E2F7Q96AV8 911 aa11.33□□□□□ -0.6
SRP54-205ENST00000554803 SPDL1Q96EA4 605 aa11.33□□□□□ -0.6
SRP54-205ENST00000554803 ZNF560Q96MR9 790 aa11.33□□□□□ -0.6
SRP54-205ENST00000554803 TRAPPC9Q96Q05 1148 aa11.33□□□□□ -0.6
SRP54-205ENST00000554803 DENND2DQ9H6A0 471 aaPredicted RBP11.33□□□□□ -0.6
SRP54-205ENST00000554803 IL1RAPL1Q9NZN1 696 aa11.33□□□□□ -0.6
SRP54-205ENST00000554803 SIRPGQ9P1W8 387 aa11.33□□□□□ -0.6
SRP54-205ENST00000554803 RCOR3Q9P2K3 495 aaPredicted RBP11.33□□□□□ -0.6
SRP54-205ENST00000554803 HEY2Q9UBP5 337 aa11.33□□□□□ -0.6
SRP54-205ENST00000554803 GRID1Q9ULK0 1009 aa11.33□□□□□ -0.6
SRP54-205ENST00000554803 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.33□□□□□ -0.6
SRP54-205ENST00000554803 BACE2Q9Y5Z0 518 aa11.33□□□□□ -0.6
SRP54-205ENST00000554803 CYSRT1A8MQ03 144 aa11.32□□□□□ -0.6
SRP54-205ENST00000554803 HACD1B0YJ81 288 aa11.32□□□□□ -0.6
SRP54-205ENST00000554803 APOL1O14791 398 aa11.32□□□□□ -0.6
SRP54-205ENST00000554803 MOSPD3O75425 235 aa11.32□□□□□ -0.6
SRP54-205ENST00000554803 B3GAT3O94766 335 aa11.32□□□□□ -0.6
SRP54-205ENST00000554803 APOEP02649 317 aa11.32□□□□□ -0.6
SRP54-205ENST00000554803 FESP07332 822 aa11.32□□□□□ -0.6
SRP54-205ENST00000554803 CCDC130P13994 396 aa11.32□□□□□ -0.6
SRP54-205ENST00000554803 CD19P15391 556 aa11.32□□□□□ -0.6
SRP54-205ENST00000554803 MIPP30301 263 aa11.32□□□□□ -0.6
SRP54-205ENST00000554803 SSTR1P30872 391 aa11.32□□□□□ -0.6
SRP54-205ENST00000554803 CRHR1P34998 444 aa11.32□□□□□ -0.6
SRP54-205ENST00000554803 BRCC3P46736 316 aa11.32□□□□□ -0.6
SRP54-205ENST00000554803 PTDSS1P48651 473 aaKnown RBP11.32□□□□□ -0.6
SRP54-205ENST00000554803 TAF6P49848 677 aa11.32□□□□□ -0.6
SRP54-205ENST00000554803 HK2P52789 917 aa11.32□□□□□ -0.6
SRP54-205ENST00000554803 LILRA4P59901 499 aa11.32□□□□□ -0.6
SRP54-205ENST00000554803 BASP1P80723 227 aaKnown RBP11.32□□□□□ -0.6
SRP54-205ENST00000554803 FCHO2Q0JRZ9 810 aa11.32□□□□□ -0.6
SRP54-205ENST00000554803 AP1B1Q10567 949 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms