RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 SKIV2LQ15477 1246 aaKnown RBP14.1□□□□□ -0.15
VTI1B-204ENST00000554659 AKIRIN2Q53H80 203 aa14.1□□□□□ -0.15
VTI1B-204ENST00000554659 IKBIPQ70UQ0 350 aa14.1□□□□□ -0.15
VTI1B-204ENST00000554659 KRT74Q7RTS7 529 aa14.1□□□□□ -0.15
VTI1B-204ENST00000554659 C16orf62Q7Z3J2 963 aa14.1□□□□□ -0.15
VTI1B-204ENST00000554659 SYT12Q8IV01 421 aa14.1□□□□□ -0.15
VTI1B-204ENST00000554659 LGI2Q8N0V4 545 aa14.1□□□□□ -0.15
VTI1B-204ENST00000554659 TEKT5Q96M29 485 aa14.1□□□□□ -0.15
VTI1B-204ENST00000554659 PGM3O95394 542 aa14.1□□□□□ -0.15
VTI1B-204ENST00000554659 PTPN1P18031 435 aaKnown RBP14.1□□□□□ -0.15
VTI1B-204ENST00000554659 TRIM32Q13049 653 aa14.1□□□□□ -0.15
VTI1B-204ENST00000554659 ZNF621Q6ZSS3 439 aa14.1□□□□□ -0.15
VTI1B-204ENST00000554659 ALYREFQ86V81 257 aaKnown RBP14.1□□□□□ -0.15
VTI1B-204ENST00000554659 SFRP1Q8N474 314 aa14.1□□□□□ -0.15
VTI1B-204ENST00000554659 MARK4Q96L34 752 aa14.1□□□□□ -0.15
VTI1B-204ENST00000554659 TBCDQ9BTW9 1192 aa14.1□□□□□ -0.15
VTI1B-204ENST00000554659 MAPRE3Q9UPY8 281 aa14.1□□□□□ -0.15
VTI1B-204ENST00000554659 LOC100506127A0A0U1RQW1 187 aa14.1□□□□□ -0.15
VTI1B-204ENST00000554659 TSPAN19P0C672 248 aa14.1□□□□□ -0.15
VTI1B-204ENST00000554659 NPR3P17342 541 aa14.1□□□□□ -0.15
VTI1B-204ENST00000554659 NFKB1P19838 968 aa14.1□□□□□ -0.15
VTI1B-204ENST00000554659 UBA1P22314 1058 aaKnown RBP14.1□□□□□ -0.15
VTI1B-204ENST00000554659 ALDH9A1P49189 494 aa14.1□□□□□ -0.15
VTI1B-204ENST00000554659 CCNIQ14094 377 aa14.1□□□□□ -0.15
VTI1B-204ENST00000554659 BOP1Q14137 746 aaKnown RBP14.1□□□□□ -0.15
VTI1B-204ENST00000554659 FGD3Q5JSP0 725 aa14.1□□□□□ -0.15
VTI1B-204ENST00000554659 NANOGNBQ7Z5D8 188 aa14.1□□□□□ -0.15
VTI1B-204ENST00000554659 LRRC49Q8IUZ0 686 aa14.1□□□□□ -0.15
VTI1B-204ENST00000554659 OR7A2PQ8NGA2 310 aa14.1□□□□□ -0.15
VTI1B-204ENST00000554659 POP5Q969H6 163 aaKnown RBP14.1□□□□□ -0.15
VTI1B-204ENST00000554659 MRIQ9BWK5 157 aa14.1□□□□□ -0.15
VTI1B-204ENST00000554659 EHD3Q9NZN3 535 aa14.1□□□□□ -0.15
VTI1B-204ENST00000554659 C3orf18Q9UK00 162 aa14.1□□□□□ -0.15
VTI1B-204ENST00000554659 SPTLC1O15269 473 aa14.1□□□□□ -0.15
VTI1B-204ENST00000554659 IGSF6O95976 241 aa14.1□□□□□ -0.15
VTI1B-204ENST00000554659 GRK4P32298 578 aa14.1□□□□□ -0.15
VTI1B-204ENST00000554659 IFNGR2P38484 337 aa14.1□□□□□ -0.15
VTI1B-204ENST00000554659 RPL7AP62424 266 aaKnown RBP14.1□□□□□ -0.15
VTI1B-204ENST00000554659 SFSWAPQ12872 951 aaKnown RBP14.1□□□□□ -0.15
VTI1B-204ENST00000554659 MFSD10Q14728 455 aa14.1□□□□□ -0.15
VTI1B-204ENST00000554659 PHKG1Q16816 387 aa14.1□□□□□ -0.15
VTI1B-204ENST00000554659 STXBP5Q5T5C0 1151 aa14.1□□□□□ -0.15
VTI1B-204ENST00000554659 FBXO30Q8TB52 745 aa14.1□□□□□ -0.15
VTI1B-204ENST00000554659 MFSD14AQ96MC6 490 aa14.1□□□□□ -0.15
VTI1B-204ENST00000554659 RECQL4O94761 1208 aa14.09□□□□□ -0.15
VTI1B-204ENST00000554659 FGRP09769 529 aa14.09□□□□□ -0.15
VTI1B-204ENST00000554659 FOLH1Q04609 750 aa14.09□□□□□ -0.15
VTI1B-204ENST00000554659 ACSM2AQ08AH3 577 aa14.09□□□□□ -0.15
VTI1B-204ENST00000554659 ATAD3BQ5T9A4 648 aa14.09□□□□□ -0.15
VTI1B-204ENST00000554659 ACSM2BQ68CK6 577 aa14.09□□□□□ -0.15
VTI1B-204ENST00000554659 SLC4A5Q9BY07 1137 aa14.09□□□□□ -0.15
VTI1B-204ENST00000554659 RSL24D1Q9UHA3 163 aaKnown RBP14.09□□□□□ -0.15
VTI1B-204ENST00000554659 A0A1W2PPM1 405 aa14.09□□□□□ -0.15
VTI1B-204ENST00000554659 RNASEH1O60930 286 aaKnown RBP14.09□□□□□ -0.15
VTI1B-204ENST00000554659 NFICP08651 508 aa14.09□□□□□ -0.15
VTI1B-204ENST00000554659 FUT2Q10981 343 aa14.09□□□□□ -0.15
VTI1B-204ENST00000554659 CRY1Q16526 586 aa14.09□□□□□ -0.15
VTI1B-204ENST00000554659 HGSNATQ68CP4 663 aa14.09□□□□□ -0.15
VTI1B-204ENST00000554659 ZFPM1Q8IX07 1006 aa14.09□□□□□ -0.15
VTI1B-204ENST00000554659 TCF12Q99081 682 aa14.09□□□□□ -0.15
VTI1B-204ENST00000554659 CDH19Q9H159 772 aa14.09□□□□□ -0.15
VTI1B-204ENST00000554659 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.09□□□□□ -0.15
VTI1B-204ENST00000554659 CNTN2Q02246 1040 aa14.09□□□□□ -0.15
VTI1B-204ENST00000554659 PHACTR4Q8IZ21 702 aa14.09□□□□□ -0.15
VTI1B-204ENST00000554659 PROX1Q92786 737 aa14.09□□□□□ -0.15
VTI1B-204ENST00000554659 C18orf25Q96B23 403 aaPredicted RBP14.09□□□□□ -0.15
VTI1B-204ENST00000554659 MTG1Q9BT17 334 aaPredicted RBP14.09□□□□□ -0.15
VTI1B-204ENST00000554659 FBXO6Q9NRD1 293 aaPredicted RBP14.09□□□□□ -0.15
VTI1B-204ENST00000554659 SNX15Q9NRS6 342 aa14.09□□□□□ -0.15
VTI1B-204ENST00000554659 CLIC5Q9NZA1 410 aa14.09□□□□□ -0.15
VTI1B-204ENST00000554659 TRAFD1O14545 582 aaPredicted RBP14.09□□□□□ -0.15
VTI1B-204ENST00000554659 MAFO75444 373 aaPredicted RBP14.09□□□□□ -0.15
VTI1B-204ENST00000554659 TYMPP19971 482 aa14.09□□□□□ -0.15
VTI1B-204ENST00000554659 ARMC12Q5T9G4 340 aa14.09□□□□□ -0.15
VTI1B-204ENST00000554659 MTSS1LQ765P7 747 aa14.09□□□□□ -0.15
VTI1B-204ENST00000554659 RCN3Q96D15 328 aa14.09□□□□□ -0.15
VTI1B-204ENST00000554659 RTKNQ9BST9 563 aa14.09□□□□□ -0.15
VTI1B-204ENST00000554659 CCDC28BQ9BUN5 200 aa14.09□□□□□ -0.15
VTI1B-204ENST00000554659 RPS6KA6Q9UK32 745 aa14.09□□□□□ -0.15
VTI1B-204ENST00000554659 FAM50BQ9Y247 325 aa14.09□□□□□ -0.15
VTI1B-204ENST00000554659 TMEM131LA2VDJ0 1609 aa14.09□□□□□ -0.15
VTI1B-204ENST00000554659 ZBTB14O43829 449 aa14.08□□□□□ -0.15
VTI1B-204ENST00000554659 COX7A2P14406 83 aa14.08□□□□□ -0.15
VTI1B-204ENST00000554659 TFEBP19484 476 aa14.08□□□□□ -0.15
VTI1B-204ENST00000554659 PTPN3P26045 913 aa14.08□□□□□ -0.15
VTI1B-204ENST00000554659 BCL2L1Q07817 233 aa14.08□□□□□ -0.15
VTI1B-204ENST00000554659 INTS11Q5TA45 600 aaKnown RBP14.08□□□□□ -0.15
VTI1B-204ENST00000554659 CDC73Q6P1J9 531 aa14.08□□□□□ -0.15
VTI1B-204ENST00000554659 PACS1Q6VY07 963 aa14.08□□□□□ -0.15
VTI1B-204ENST00000554659 RBM44Q6ZP01 1051 aaKnown RBP14.08□□□□□ -0.15
VTI1B-204ENST00000554659 ANKRD52Q8NB46 1076 aa14.08□□□□□ -0.15
VTI1B-204ENST00000554659 KCTD4Q8WVF5 259 aa14.08□□□□□ -0.15
VTI1B-204ENST00000554659 SENP8Q96LD8 212 aa14.08□□□□□ -0.15
VTI1B-204ENST00000554659 PURBQ96QR8 312 aaKnown RBP14.08□□□□□ -0.15
VTI1B-204ENST00000554659 ACO2Q99798 780 aaKnown RBP14.08□□□□□ -0.15
VTI1B-204ENST00000554659 ABHD16BQ9H3Z7 469 aa14.08□□□□□ -0.15
VTI1B-204ENST00000554659 ERVK-5Q9HDB9 667 aa14.08□□□□□ -0.15
VTI1B-204ENST00000554659 MAN1C1Q9NR34 630 aa14.08□□□□□ -0.15
VTI1B-204ENST00000554659 EFR3BQ9Y2G0 817 aa14.08□□□□□ -0.15
VTI1B-204ENST00000554659 AP4B1Q9Y6B7 739 aa14.08□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms