RNA–Protein interactions for RNA: ENST00000554656.5

SHMT2-215, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-215ENST00000554656 TNNT1P13805 278 aa10.8□□□□□ -0.68
SHMT2-215ENST00000554656 CHRNA3P32297 505 aa10.8□□□□□ -0.68
SHMT2-215ENST00000554656 NUDT1P36639 197 aa10.8□□□□□ -0.68
SHMT2-215ENST00000554656 SCNN1AP37088 669 aa10.8□□□□□ -0.68
SHMT2-215ENST00000554656 BPIFB4P59827 614 aa10.8□□□□□ -0.68
SHMT2-215ENST00000554656 ETF1P62495 437 aaKnown RBP10.8□□□□□ -0.68
SHMT2-215ENST00000554656 OVGP1Q12889 678 aa10.8□□□□□ -0.68
SHMT2-215ENST00000554656 TARDBPQ13148 414 aaKnown RBP eCLIP10.8□□□□□ -0.68
SHMT2-215ENST00000554656 FGL2Q14314 439 aa10.8□□□□□ -0.68
SHMT2-215ENST00000554656 ACAP1Q15027 740 aa10.8□□□□□ -0.68
SHMT2-215ENST00000554656 SETMARQ53H47 684 aaPredicted RBP10.8□□□□□ -0.68
SHMT2-215ENST00000554656 SLC45A4Q5BKX6 768 aa10.8□□□□□ -0.68
SHMT2-215ENST00000554656 TAF3Q5VWG9 929 aa10.8□□□□□ -0.68
SHMT2-215ENST00000554656 C22orf39Q6P5X5 142 aa10.8□□□□□ -0.68
SHMT2-215ENST00000554656 NOP9Q86U38 636 aaKnown RBP10.8□□□□□ -0.68
SHMT2-215ENST00000554656 SLC25A45Q8N413 288 aa10.8□□□□□ -0.68
SHMT2-215ENST00000554656 OXR1Q8N573 874 aa10.8□□□□□ -0.68
SHMT2-215ENST00000554656 ATP11CQ8NB49 1132 aa10.8□□□□□ -0.68
SHMT2-215ENST00000554656 ACRBPQ8NEB7 543 aa10.8□□□□□ -0.68
SHMT2-215ENST00000554656 OR13H1Q8NG92 308 aa10.8□□□□□ -0.68
SHMT2-215ENST00000554656 GRIN3AQ8TCU5 1115 aa10.8□□□□□ -0.68
SHMT2-215ENST00000554656 DESI2Q9BSY9 194 aa10.8□□□□□ -0.68
SHMT2-215ENST00000554656 TNKS2Q9H2K2 1166 aa10.8□□□□□ -0.68
SHMT2-215ENST00000554656 WDCPQ9H6R7 721 aa10.8□□□□□ -0.68
SHMT2-215ENST00000554656 SYNCQ9H7C4 482 aa10.8□□□□□ -0.68
SHMT2-215ENST00000554656 UCKL1Q9NWZ5 548 aa10.8□□□□□ -0.68
SHMT2-215ENST00000554656 RRN3Q9NYV6 651 aa10.8□□□□□ -0.68
SHMT2-215ENST00000554656 REXO2Q9Y3B8 237 aaKnown RBP10.8□□□□□ -0.68
SHMT2-215ENST00000554656 ACTL7AQ9Y615 435 aa10.8□□□□□ -0.68
SHMT2-215ENST00000554656 WASF2Q9Y6W5 498 aa10.8□□□□□ -0.68
SHMT2-215ENST00000554656 LRRK1Q38SD2 2015 aa10.79□□□□□ -0.68
SHMT2-215ENST00000554656 KPNA3O00505 521 aaPredicted RBP10.79□□□□□ -0.68
SHMT2-215ENST00000554656 SIGLEC6O43699 453 aa10.79□□□□□ -0.68
SHMT2-215ENST00000554656 CD160O95971 181 aa10.79□□□□□ -0.68
SHMT2-215ENST00000554656 PLEKP08567 350 aaPredicted RBP10.79□□□□□ -0.68
SHMT2-215ENST00000554656 JUPP14923 745 aa10.79□□□□□ -0.68
SHMT2-215ENST00000554656 CYP11B1P15538 503 aa10.79□□□□□ -0.68
SHMT2-215ENST00000554656 CKMT2P17540 419 aa10.79□□□□□ -0.68
SHMT2-215ENST00000554656 ITPKBP27987 946 aa10.79□□□□□ -0.68
SHMT2-215ENST00000554656 CLDN2P57739 230 aa10.79□□□□□ -0.68
SHMT2-215ENST00000554656 NOMO3P69849 1222 aa10.79□□□□□ -0.68
SHMT2-215ENST00000554656 INSM1Q01101 510 aaPredicted RBP10.79□□□□□ -0.68
SHMT2-215ENST00000554656 DEUP1Q05D60 604 aa10.79□□□□□ -0.68
SHMT2-215ENST00000554656 MTA1Q13330 715 aa10.79□□□□□ -0.68
SHMT2-215ENST00000554656 STAT4Q14765 748 aa10.79□□□□□ -0.68
SHMT2-215ENST00000554656 SLC25A52Q3SY17 297 aa10.79□□□□□ -0.68
SHMT2-215ENST00000554656 TMEM259Q4ZIN3 620 aa10.79□□□□□ -0.68
SHMT2-215ENST00000554656 DNTTIP2Q5QJE6 756 aaKnown RBP10.79□□□□□ -0.68
SHMT2-215ENST00000554656 FAM102AQ5T9C2 384 aaPredicted RBP10.79□□□□□ -0.68
SHMT2-215ENST00000554656 SEL1L3Q68CR1 1132 aa10.79□□□□□ -0.68
SHMT2-215ENST00000554656 GCNT7Q6ZNI0 430 aa10.79□□□□□ -0.68
SHMT2-215ENST00000554656 DPY19L3Q6ZPD9 716 aa10.79□□□□□ -0.68
SHMT2-215ENST00000554656 KIAA1328Q86T90 577 aa10.79□□□□□ -0.68
SHMT2-215ENST00000554656 SETD3Q86TU7 594 aaPredicted RBP10.79□□□□□ -0.68
SHMT2-215ENST00000554656 HORMAD1Q86X24 394 aa10.79□□□□□ -0.68
SHMT2-215ENST00000554656 ZNF677Q86XU0 584 aa10.79□□□□□ -0.68
SHMT2-215ENST00000554656 ZDHHC17Q8IUH5 632 aa10.79□□□□□ -0.68
SHMT2-215ENST00000554656 SLC22A18ASQ8N1D0 253 aa10.79□□□□□ -0.68
SHMT2-215ENST00000554656 TMEM35BQ8NCS4 154 aa10.79□□□□□ -0.68
SHMT2-215ENST00000554656 TMIEQ8NEW7 156 aa10.79□□□□□ -0.68
SHMT2-215ENST00000554656 RFFLQ8WZ73 363 aa10.79□□□□□ -0.68
SHMT2-215ENST00000554656 VOPP1Q96AW1 172 aa10.79□□□□□ -0.68
SHMT2-215ENST00000554656 NXPE2Q96DL1 559 aa10.79□□□□□ -0.68
SHMT2-215ENST00000554656 C16orf45Q96MC5 204 aaPredicted RBP10.79□□□□□ -0.68
SHMT2-215ENST00000554656 CFAP57Q96MR6 1250 aa10.79□□□□□ -0.68
SHMT2-215ENST00000554656 DCBLD2Q96PD2 775 aa10.79□□□□□ -0.68
SHMT2-215ENST00000554656 SYT11Q9BT88 431 aa10.79□□□□□ -0.68
SHMT2-215ENST00000554656 C2orf49Q9BVC5 232 aaPredicted RBP10.79□□□□□ -0.68
SHMT2-215ENST00000554656 TMEM59LQ9UK28 342 aa10.79□□□□□ -0.68
SHMT2-215ENST00000554656 INTUQ9ULD6 942 aa10.79□□□□□ -0.68
SHMT2-215ENST00000554656 STAP1Q9ULZ2 295 aa10.79□□□□□ -0.68
SHMT2-215ENST00000554656 NENFQ9UMX5 172 aa10.79□□□□□ -0.68
SHMT2-215ENST00000554656 NEU3Q9UQ49 428 aa10.79□□□□□ -0.68
SHMT2-215ENST00000554656 PAXBP1Q9Y5B6 917 aa10.79□□□□□ -0.68
SHMT2-215ENST00000554656 MGAQ8IWI9 3026 aa10.78□□□□□ -0.68
SHMT2-215ENST00000554656 RP1P56715 2156 aa10.78□□□□□ -0.68
SHMT2-215ENST00000554656 LY6G6EA0A0G2JKS1 128 aa10.78□□□□□ -0.68
SHMT2-215ENST00000554656 BTNL10A8MVZ5 291 aa10.78□□□□□ -0.68
SHMT2-215ENST00000554656 GOLGA8SH3BPF8 625 aa10.78□□□□□ -0.68
SHMT2-215ENST00000554656 RAD51BO15315 384 aa10.78□□□□□ -0.68
SHMT2-215ENST00000554656 KIF5CO60282 957 aa10.78□□□□□ -0.68
SHMT2-215ENST00000554656 LEFTY1O75610 366 aa10.78□□□□□ -0.68
SHMT2-215ENST00000554656 ENDOD1O94919 500 aa10.78□□□□□ -0.68
SHMT2-215ENST00000554656 MMEP08473 750 aa10.78□□□□□ -0.68
SHMT2-215ENST00000554656 THEGLP0DJG4 465 aa10.78□□□□□ -0.68
SHMT2-215ENST00000554656 DGKAP23743 735 aa10.78□□□□□ -0.68
SHMT2-215ENST00000554656 ACP1P24666 158 aa10.78□□□□□ -0.68
SHMT2-215ENST00000554656 HNF1BP35680 557 aa10.78□□□□□ -0.68
SHMT2-215ENST00000554656 ARHGAP25P42331 645 aa10.78□□□□□ -0.68
SHMT2-215ENST00000554656 MAGEA1P43355 309 aa10.78□□□□□ -0.68
SHMT2-215ENST00000554656 SERPINH1P50454 418 aaKnown RBP10.78□□□□□ -0.68
SHMT2-215ENST00000554656 ARF5P84085 180 aa10.78□□□□□ -0.68
SHMT2-215ENST00000554656 SEMG2Q02383 582 aa10.78□□□□□ -0.68
SHMT2-215ENST00000554656 KIF5AQ12840 1032 aa10.78□□□□□ -0.68
SHMT2-215ENST00000554656 RTP5Q14D33 572 aa10.78□□□□□ -0.68
SHMT2-215ENST00000554656 ARSIQ5FYB1 569 aa10.78□□□□□ -0.68
SHMT2-215ENST00000554656 NAA35Q5VZE5 725 aa10.78□□□□□ -0.68
SHMT2-215ENST00000554656 PPP1R2P3Q6NXS1 205 aa10.78□□□□□ -0.68
SHMT2-215ENST00000554656 KDM7AQ6ZMT4 941 aa10.78□□□□□ -0.68
SHMT2-215ENST00000554656 ERN2Q76MJ5 926 aaKnown RBP10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms