RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 HESX1Q9UBX0 185 aa6.59□□□□□ -1.35
SCFD1-212ENST00000554486 ASB1Q9Y576 335 aa6.59□□□□□ -1.35
SCFD1-212ENST00000554486 CEP83Q9Y592 693 aa6.59□□□□□ -1.35
SCFD1-212ENST00000554486 NOTCH4Q99466 2003 aa6.59□□□□□ -1.36
SCFD1-212ENST00000554486 A0A0U1RQJ8 604 aa6.58□□□□□ -1.36
SCFD1-212ENST00000554486 E5RJQ4 531 aa6.58□□□□□ -1.36
SCFD1-212ENST00000554486 PER2O15055 1255 aa6.58□□□□□ -1.36
SCFD1-212ENST00000554486 TRIM13O60858 407 aa6.58□□□□□ -1.36
SCFD1-212ENST00000554486 PRKD3O94806 890 aa6.58□□□□□ -1.36
SCFD1-212ENST00000554486 FTLP02792 175 aaPredicted RBP6.58□□□□□ -1.36
SCFD1-212ENST00000554486 ERBB2P04626 1255 aa6.58□□□□□ -1.36
SCFD1-212ENST00000554486 SPATA31D3P0C874 917 aa6.58□□□□□ -1.36
SCFD1-212ENST00000554486 MMP8P22894 467 aa6.58□□□□□ -1.36
SCFD1-212ENST00000554486 KLRC2P26717 231 aa6.58□□□□□ -1.36
SCFD1-212ENST00000554486 GABRB2P47870 512 aa6.58□□□□□ -1.36
SCFD1-212ENST00000554486 CLCN4P51793 760 aa6.58□□□□□ -1.36
SCFD1-212ENST00000554486 GALCP54803 685 aa6.58□□□□□ -1.36
SCFD1-212ENST00000554486 OCRLQ01968 901 aa6.58□□□□□ -1.36
SCFD1-212ENST00000554486 DUSP6Q16828 381 aa6.58□□□□□ -1.36
SCFD1-212ENST00000554486 MGAT5BQ3V5L5 792 aa6.58□□□□□ -1.36
SCFD1-212ENST00000554486 C2CD6Q53TS8 623 aa6.58□□□□□ -1.36
SCFD1-212ENST00000554486 RAB41Q5JT25 222 aa6.58□□□□□ -1.36
SCFD1-212ENST00000554486 GPR158Q5T848 1215 aa6.58□□□□□ -1.36
SCFD1-212ENST00000554486 SDHAF4Q5VUM1 108 aa6.58□□□□□ -1.36
SCFD1-212ENST00000554486 RNF219Q5W0B1 726 aaPredicted RBP6.58□□□□□ -1.36
SCFD1-212ENST00000554486 VSTM1Q6UX27 236 aa6.58□□□□□ -1.36
SCFD1-212ENST00000554486 MMS22LQ6ZRQ5 1243 aa6.58□□□□□ -1.36
SCFD1-212ENST00000554486 SPATA31D4Q6ZUB0 917 aa6.58□□□□□ -1.36
SCFD1-212ENST00000554486 TMEM110Q86TL2 294 aa6.58□□□□□ -1.36
SCFD1-212ENST00000554486 PIGZQ86VD9 579 aa6.58□□□□□ -1.36
SCFD1-212ENST00000554486 SCN4BQ8IWT1 228 aa6.58□□□□□ -1.36
SCFD1-212ENST00000554486 TCEAL8Q8IYN2 117 aa6.58□□□□□ -1.36
SCFD1-212ENST00000554486 MCOLN2Q8IZK6 566 aa6.58□□□□□ -1.36
SCFD1-212ENST00000554486 ZNF610Q8N9Z0 462 aa6.58□□□□□ -1.36
SCFD1-212ENST00000554486 STKLD1Q8NE28 680 aa6.58□□□□□ -1.36
SCFD1-212ENST00000554486 ATRIPQ8WXE1 791 aa6.58□□□□□ -1.36
SCFD1-212ENST00000554486 ZBTB8AQ96BR9 441 aa6.58□□□□□ -1.36
SCFD1-212ENST00000554486 MRPL38Q96DV4 380 aaKnown RBP6.58□□□□□ -1.36
SCFD1-212ENST00000554486 PPP1R13BQ96KQ4 1090 aa6.58□□□□□ -1.36
SCFD1-212ENST00000554486 SPATA17Q96L03 361 aa6.58□□□□□ -1.36
SCFD1-212ENST00000554486 C8orf48Q96LL4 319 aa6.58□□□□□ -1.36
SCFD1-212ENST00000554486 UBXN6Q9BZV1 441 aa6.58□□□□□ -1.36
SCFD1-212ENST00000554486 PRDM12Q9H4Q4 367 aa6.58□□□□□ -1.36
SCFD1-212ENST00000554486 CYP4F11Q9HBI6 524 aa6.58□□□□□ -1.36
SCFD1-212ENST00000554486 DMAP1Q9NPF5 467 aaPredicted RBP6.58□□□□□ -1.36
SCFD1-212ENST00000554486 KCND1Q9NSA2 647 aa6.58□□□□□ -1.36
SCFD1-212ENST00000554486 HSFX1Q9UBD0 423 aa6.58□□□□□ -1.36
SCFD1-212ENST00000554486 MCM8Q9UJA3 840 aa6.58□□□□□ -1.36
SCFD1-212ENST00000554486 FBXW11Q9UKB1 542 aa6.58□□□□□ -1.36
SCFD1-212ENST00000554486 MAFFQ9ULX9 164 aa6.58□□□□□ -1.36
SCFD1-212ENST00000554486 TFR2Q9UP52 801 aa6.58□□□□□ -1.36
SCFD1-212ENST00000554486 YIPF1Q9Y548 306 aa6.58□□□□□ -1.36
SCFD1-212ENST00000554486 PCDHA13Q9Y5I0 950 aa6.58□□□□□ -1.36
SCFD1-212ENST00000554486 DENND4CQ5VZ89 1909 aa6.58□□□□□ -1.36
SCFD1-212ENST00000554486 ANAPC1Q9H1A4 1944 aa6.58□□□□□ -1.36
SCFD1-212ENST00000554486 MYO16Q9Y6X6 1858 aa6.58□□□□□ -1.36
SCFD1-212ENST00000554486 TCRBV5S1A1TA0A578 114 aa6.57□□□□□ -1.36
SCFD1-212ENST00000554486 SLC38A8A6NNN8 435 aa6.57□□□□□ -1.36
SCFD1-212ENST00000554486 PAPSS1O43252 624 aaPredicted RBP6.57□□□□□ -1.36
SCFD1-212ENST00000554486 GLUD1P00367 558 aa6.57□□□□□ -1.36
SCFD1-212ENST00000554486 C1RP00736 705 aa6.57□□□□□ -1.36
SCFD1-212ENST00000554486 PRLP01236 227 aa6.57□□□□□ -1.36
SCFD1-212ENST00000554486 H2AFZP0C0S5 128 aa6.57□□□□□ -1.36
SCFD1-212ENST00000554486 EPCAMP16422 314 aa6.57□□□□□ -1.36
SCFD1-212ENST00000554486 ATF6P18850 670 aa6.57□□□□□ -1.36
SCFD1-212ENST00000554486 ABCB4P21439 1286 aa6.57□□□□□ -1.36
SCFD1-212ENST00000554486 ELF1P32519 619 aa6.57□□□□□ -1.36
SCFD1-212ENST00000554486 MAGEA1P43355 309 aa6.57□□□□□ -1.36
SCFD1-212ENST00000554486 ACADSBP45954 432 aa6.57□□□□□ -1.36
SCFD1-212ENST00000554486 NSFP46459 744 aaKnown RBP6.57□□□□□ -1.36
SCFD1-212ENST00000554486 TUFMP49411 452 aaKnown RBP6.57□□□□□ -1.36
SCFD1-212ENST00000554486 MLLT6P55198 1093 aaPredicted RBP6.57□□□□□ -1.36
SCFD1-212ENST00000554486 RPL10AP62906 217 aaKnown RBP6.57□□□□□ -1.36
SCFD1-212ENST00000554486 ADIGQ0VDE8 80 aa6.57□□□□□ -1.36
SCFD1-212ENST00000554486 KCNC3Q14003 757 aa6.57□□□□□ -1.36
SCFD1-212ENST00000554486 PDCD1Q15116 288 aa6.57□□□□□ -1.36
SCFD1-212ENST00000554486 SPA17Q15506 151 aa6.57□□□□□ -1.36
SCFD1-212ENST00000554486 HS1BP3Q53T59 392 aa6.57□□□□□ -1.36
SCFD1-212ENST00000554486 C10orf76Q5T2E6 689 aa6.57□□□□□ -1.36
SCFD1-212ENST00000554486 CYP4A22Q5TCH4 519 aa6.57□□□□□ -1.36
SCFD1-212ENST00000554486 H2AFVQ71UI9 128 aa6.57□□□□□ -1.36
SCFD1-212ENST00000554486 BHLHA9Q7RTU4 235 aa6.57□□□□□ -1.36
SCFD1-212ENST00000554486 PHLDB2Q86SQ0 1253 aa6.57□□□□□ -1.36
SCFD1-212ENST00000554486 RBM23Q86U06 439 aaKnown RBP6.57□□□□□ -1.36
SCFD1-212ENST00000554486 ERICH1Q86X53 443 aa6.57□□□□□ -1.36
SCFD1-212ENST00000554486 XYLT1Q86Y38 959 aa6.57□□□□□ -1.36
SCFD1-212ENST00000554486 CMIPQ8IY22 773 aa6.57□□□□□ -1.36
SCFD1-212ENST00000554486 VN1R2Q8NFZ6 395 aa6.57□□□□□ -1.36
SCFD1-212ENST00000554486 SCAMP5Q8TAC9 235 aa6.57□□□□□ -1.36
SCFD1-212ENST00000554486 FEZF2Q8TBJ5 459 aa6.57□□□□□ -1.36
SCFD1-212ENST00000554486 CLEC4CQ8WTT0 213 aa6.57□□□□□ -1.36
SCFD1-212ENST00000554486 NDRG1Q92597 394 aaKnown RBP6.57□□□□□ -1.36
SCFD1-212ENST00000554486 C18orf8Q96DM3 657 aa6.57□□□□□ -1.36
SCFD1-212ENST00000554486 ARHGEF26Q96DR7 871 aa6.57□□□□□ -1.36
SCFD1-212ENST00000554486 MCRS1Q96EZ8 462 aa6.57□□□□□ -1.36
SCFD1-212ENST00000554486 PIWIL1Q96J94 861 aaKnown RBP6.57□□□□□ -1.36
SCFD1-212ENST00000554486 VCPIP1Q96JH7 1222 aa6.57□□□□□ -1.36
SCFD1-212ENST00000554486 HSFY1Q96LI6 401 aa6.57□□□□□ -1.36
SCFD1-212ENST00000554486 SEPT5Q99719 369 aaPredicted RBP6.57□□□□□ -1.36
SCFD1-212ENST00000554486 C11orf70Q9BRQ4 267 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 122 ms