RNA–Protein interactions for RNA: ENST00000553686.5

ATXN3-223, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 869 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-223ENST00000553686 LAMTOR4Q0VGL1 99 aa6.33□□□□□ -1.4
ATXN3-223ENST00000553686 MGAT2Q10469 447 aa6.33□□□□□ -1.4
ATXN3-223ENST00000553686 PDGFRLQ15198 375 aa6.33□□□□□ -1.4
ATXN3-223ENST00000553686 TIGD2Q4W5G0 525 aa6.33□□□□□ -1.4
ATXN3-223ENST00000553686 AFMIDQ63HM1 303 aa6.33□□□□□ -1.4
ATXN3-223ENST00000553686 SLC27A1Q6PCB7 646 aa6.33□□□□□ -1.4
ATXN3-223ENST00000553686 MARCH9Q86YJ5 346 aa6.33□□□□□ -1.4
ATXN3-223ENST00000553686 RNF149Q8NC42 400 aa6.33□□□□□ -1.4
ATXN3-223ENST00000553686 C1orf162Q8NEQ5 155 aaPredicted RBP6.33□□□□□ -1.4
ATXN3-223ENST00000553686 RDM1Q8NG50 284 aa6.33□□□□□ -1.4
ATXN3-223ENST00000553686 TCP11Q8WWU5 503 aa6.33□□□□□ -1.4
ATXN3-223ENST00000553686 CD101Q93033 1021 aa6.33□□□□□ -1.4
ATXN3-223ENST00000553686 CHFRQ96EP1 664 aa6.33□□□□□ -1.4
ATXN3-223ENST00000553686 UROC1Q96N76 676 aa6.33□□□□□ -1.4
ATXN3-223ENST00000553686 CEP89Q96ST8 783 aa6.33□□□□□ -1.4
ATXN3-223ENST00000553686 MRI1Q9BV20 369 aa6.33□□□□□ -1.4
ATXN3-223ENST00000553686 TEX101Q9BY14 249 aa6.33□□□□□ -1.4
ATXN3-223ENST00000553686 SEMA4CQ9C0C4 833 aa6.33□□□□□ -1.4
ATXN3-223ENST00000553686 NXF3Q9H4D5 531 aaKnown RBP6.33□□□□□ -1.4
ATXN3-223ENST00000553686 EBF3Q9H4W6 596 aa6.33□□□□□ -1.4
ATXN3-223ENST00000553686 TASP1Q9H6P5 420 aa6.33□□□□□ -1.4
ATXN3-223ENST00000553686 LANCL2Q9NS86 450 aa6.33□□□□□ -1.4
ATXN3-223ENST00000553686 MOCS1Q9NZB8 636 aa6.33□□□□□ -1.4
ATXN3-223ENST00000553686 INTUQ9ULD6 942 aa6.33□□□□□ -1.4
ATXN3-223ENST00000553686 MMP17Q9ULZ9 603 aa6.33□□□□□ -1.4
ATXN3-223ENST00000553686 TBX20Q9UMR3 447 aa6.33□□□□□ -1.4
ATXN3-223ENST00000553686 SIK3Q9Y2K2 1263 aa6.33□□□□□ -1.4
ATXN3-223ENST00000553686 ASB3Q9Y575 518 aa6.33□□□□□ -1.4
ATXN3-223ENST00000553686 PCDHGB2Q9Y5G2 931 aa6.33□□□□□ -1.4
ATXN3-223ENST00000553686 ASCC3Q8N3C0 2202 aaKnown RBP6.33□□□□□ -1.4
ATXN3-223ENST00000553686 IGLV3-22A0A075B6J6 115 aa6.32□□□□□ -1.4
ATXN3-223ENST00000553686 DIRC3C9JPN6 131 aa6.32□□□□□ -1.4
ATXN3-223ENST00000553686 INO80B-WBP1J3KQ70 363 aa6.32□□□□□ -1.4
ATXN3-223ENST00000553686 RNASET2O00584 256 aaKnown RBP6.32□□□□□ -1.4
ATXN3-223ENST00000553686 ZNF185O15231 689 aa6.32□□□□□ -1.4
ATXN3-223ENST00000553686 FLRT2O43155 660 aa6.32□□□□□ -1.4
ATXN3-223ENST00000553686 TSPAN1O60635 241 aa6.32□□□□□ -1.4
ATXN3-223ENST00000553686 DKC1O60832 514 aaKnown RBP eCLIP6.32□□□□□ -1.4
ATXN3-223ENST00000553686 MT-CO1P00395 513 aa6.32□□□□□ -1.4
ATXN3-223ENST00000553686 AFPP02771 609 aaKnown RBP6.32□□□□□ -1.4
ATXN3-223ENST00000553686 RAP2AP10114 183 aa6.32□□□□□ -1.4
ATXN3-223ENST00000553686 MYBL2P10244 700 aa6.32□□□□□ -1.4
ATXN3-223ENST00000553686 ZFP36P26651 326 aaKnown RBP6.32□□□□□ -1.4
ATXN3-223ENST00000553686 TKTP29401 623 aaKnown RBP6.32□□□□□ -1.4
ATXN3-223ENST00000553686 SLC6A9P48067 706 aa6.32□□□□□ -1.4
ATXN3-223ENST00000553686 CHN2P52757 468 aa6.32□□□□□ -1.4
ATXN3-223ENST00000553686 NAPAP54920 295 aa6.32□□□□□ -1.4
ATXN3-223ENST00000553686 MRPS21P82921 87 aaKnown RBP6.32□□□□□ -1.4
ATXN3-223ENST00000553686 POU5F1BQ06416 359 aa6.32□□□□□ -1.4
ATXN3-223ENST00000553686 CCDC173Q0VFZ6 552 aa6.32□□□□□ -1.4
ATXN3-223ENST00000553686 TFDP1Q14186 410 aa6.32□□□□□ -1.4
ATXN3-223ENST00000553686 MXD4Q14582 209 aaPredicted RBP6.32□□□□□ -1.4
ATXN3-223ENST00000553686 ACAP2Q15057 778 aa6.32□□□□□ -1.4
ATXN3-223ENST00000553686 PRR16Q569H4 304 aa6.32□□□□□ -1.4
ATXN3-223ENST00000553686 ARHGAP40Q5TG30 622 aa6.32□□□□□ -1.4
ATXN3-223ENST00000553686 IL27RAQ6UWB1 636 aa6.32□□□□□ -1.4
ATXN3-223ENST00000553686 RHOUQ7L0Q8 258 aa6.32□□□□□ -1.4
ATXN3-223ENST00000553686 CYB5R4Q7L1T6 521 aa6.32□□□□□ -1.4
ATXN3-223ENST00000553686 TMTC2Q8N394 836 aa6.32□□□□□ -1.4
ATXN3-223ENST00000553686 CPA6Q8N4T0 437 aa6.32□□□□□ -1.4
ATXN3-223ENST00000553686 SRBD1Q8N5C6 995 aaKnown RBP6.32□□□□□ -1.4
ATXN3-223ENST00000553686 PROKR1Q8TCW9 393 aa6.32□□□□□ -1.4
ATXN3-223ENST00000553686 CCHCR1Q8TD31 782 aa6.32□□□□□ -1.4
ATXN3-223ENST00000553686 NRG4Q8WWG1 115 aa6.32□□□□□ -1.4
ATXN3-223ENST00000553686 JADE3Q92613 823 aa6.32□□□□□ -1.4
ATXN3-223ENST00000553686 CYFIP2Q96F07 1278 aa6.32□□□□□ -1.4
ATXN3-223ENST00000553686 CPB2Q96IY4 423 aa6.32□□□□□ -1.4
ATXN3-223ENST00000553686 PGBD1Q96JS3 809 aa6.32□□□□□ -1.4
ATXN3-223ENST00000553686 GCNAQ96QF7 691 aa6.32□□□□□ -1.4
ATXN3-223ENST00000553686 RIT2Q99578 217 aa6.32□□□□□ -1.4
ATXN3-223ENST00000553686 AKIP1Q9NQ31 210 aa6.32□□□□□ -1.4
ATXN3-223ENST00000553686 TMEM140Q9NV12 185 aa6.32□□□□□ -1.4
ATXN3-223ENST00000553686 CACNG4Q9UBN1 327 aa6.32□□□□□ -1.4
ATXN3-223ENST00000553686 AJAP1Q9UKB5 411 aaPredicted RBP6.32□□□□□ -1.4
ATXN3-223ENST00000553686 TRHDEQ9UKU6 1024 aa6.32□□□□□ -1.4
ATXN3-223ENST00000553686 CHST2Q9Y4C5 530 aa6.32□□□□□ -1.4
ATXN3-223ENST00000553686 MYH15Q9Y2K3 1946 aa6.32□□□□□ -1.4
ATXN3-223ENST00000553686 COL6A6A6NMZ7 2263 aa6.32□□□□□ -1.4
ATXN3-223ENST00000553686 A0A1B0GUA9 196 aa6.31□□□□□ -1.4
ATXN3-223ENST00000553686 KLHL33A6NCF5 533 aa6.31□□□□□ -1.4
ATXN3-223ENST00000553686 SMCO2A6NFE2 343 aa6.31□□□□□ -1.4
ATXN3-223ENST00000553686 FAM171A2A8MVW0 826 aa6.31□□□□□ -1.4
ATXN3-223ENST00000553686 SYN3O14994 580 aa6.31□□□□□ -1.4
ATXN3-223ENST00000553686 MARCH6O60337 910 aa6.31□□□□□ -1.4
ATXN3-223ENST00000553686 ZNF217O75362 1048 aa6.31□□□□□ -1.4
ATXN3-223ENST00000553686 KATNA1O75449 491 aa6.31□□□□□ -1.4
ATXN3-223ENST00000553686 NCR1O76036 304 aa6.31□□□□□ -1.4
ATXN3-223ENST00000553686 NDUFA10O95299 355 aa6.31□□□□□ -1.4
ATXN3-223ENST00000553686 CER1O95813 267 aa6.31□□□□□ -1.4
ATXN3-223ENST00000553686 ABHD16AO95870 558 aa6.31□□□□□ -1.4
ATXN3-223ENST00000553686 PRKCBP05771 671 aa6.31□□□□□ -1.4
ATXN3-223ENST00000553686 CALM1P0DP23 149 aa6.31□□□□□ -1.4
ATXN3-223ENST00000553686 CALM2P0DP24 149 aa6.31□□□□□ -1.4
ATXN3-223ENST00000553686 CALM3P0DP25 149 aa6.31□□□□□ -1.4
ATXN3-223ENST00000553686 CDC25CP30307 473 aa6.31□□□□□ -1.4
ATXN3-223ENST00000553686 AVPR1AP37288 418 aa6.31□□□□□ -1.4
ATXN3-223ENST00000553686 PTENP60484 403 aa6.31□□□□□ -1.4
ATXN3-223ENST00000553686 BFSP1Q12934 665 aa6.31□□□□□ -1.4
ATXN3-223ENST00000553686 UGCGQ16739 394 aa6.31□□□□□ -1.4
ATXN3-223ENST00000553686 CTXN3Q4LDR2 81 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms