RNA–Protein interactions for RNA: ENST00000553309.5

ATXN3-218, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,022 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-218ENST00000553309 DUSP1P28562 367 aa5.44□□□□□ -1.54
ATXN3-218ENST00000553309 VPS41P49754 854 aa5.44□□□□□ -1.54
ATXN3-218ENST00000553309 HSF1Q00613 529 aa5.44□□□□□ -1.54
ATXN3-218ENST00000553309 ID2Q02363 134 aa5.44□□□□□ -1.54
ATXN3-218ENST00000553309 CFHR1Q03591 330 aa5.44□□□□□ -1.54
ATXN3-218ENST00000553309 PMS2P11Q13670 270 aa5.44□□□□□ -1.54
ATXN3-218ENST00000553309 SLC5A9Q2M3M2 681 aa5.44□□□□□ -1.54
ATXN3-218ENST00000553309 EARS2Q5JPH6 523 aaKnown RBP5.44□□□□□ -1.54
ATXN3-218ENST00000553309 FAM90A2PQ658T7 463 aa5.44□□□□□ -1.54
ATXN3-218ENST00000553309 ANKRD33Q7Z3H0 272 aa5.44□□□□□ -1.54
ATXN3-218ENST00000553309 ZNF366Q8N895 744 aa5.44□□□□□ -1.54
ATXN3-218ENST00000553309 PARD3BQ8TEW8 1205 aa5.44□□□□□ -1.54
ATXN3-218ENST00000553309 OVCA2Q8WZ82 227 aa5.44□□□□□ -1.54
ATXN3-218ENST00000553309 ZNF566Q969W8 418 aa5.44□□□□□ -1.54
ATXN3-218ENST00000553309 RIPOR3Q96MK2 946 aa5.44□□□□□ -1.54
ATXN3-218ENST00000553309 TM2D2Q9BX73 214 aa5.44□□□□□ -1.54
ATXN3-218ENST00000553309 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.44□□□□□ -1.54
ATXN3-218ENST00000553309 AGO4Q9HCK5 861 aaKnown RBP5.44□□□□□ -1.54
ATXN3-218ENST00000553309 HYPKQ9NX55 129 aa5.44□□□□□ -1.54
ATXN3-218ENST00000553309 RAI14Q9P0K7 980 aa5.44□□□□□ -1.54
ATXN3-218ENST00000553309 MYO15AQ9UKN7 3530 aa5.44□□□□□ -1.54
ATXN3-218ENST00000553309 MTUS1Q9ULD2 1270 aa5.44□□□□□ -1.54
ATXN3-218ENST00000553309 CEP83Q9Y592 693 aa5.44□□□□□ -1.54
ATXN3-218ENST00000553309 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.43□□□□□ -1.54
ATXN3-218ENST00000553309 SLC15A5A6NIM6 579 aa5.43□□□□□ -1.54
ATXN3-218ENST00000553309 VGLL3A8MV65 326 aa5.43□□□□□ -1.54
ATXN3-218ENST00000553309 PROB1E7EW31 1015 aa5.43□□□□□ -1.54
ATXN3-218ENST00000553309 INPPL1O15357 1258 aa5.43□□□□□ -1.54
ATXN3-218ENST00000553309 FRAT2O75474 233 aaPredicted RBP5.43□□□□□ -1.54
ATXN3-218ENST00000553309 VIPP01282 170 aa5.43□□□□□ -1.54
ATXN3-218ENST00000553309 KRT18P05783 430 aaKnown RBP5.43□□□□□ -1.54
ATXN3-218ENST00000553309 IGKV5-2P06315 115 aa5.43□□□□□ -1.54
ATXN3-218ENST00000553309 HSPA5P11021 654 aaKnown RBP5.43□□□□□ -1.54
ATXN3-218ENST00000553309 PRF1P14222 555 aa5.43□□□□□ -1.54
ATXN3-218ENST00000553309 EGR1P18146 543 aa5.43□□□□□ -1.54
ATXN3-218ENST00000553309 SSR1P43307 286 aaKnown RBP5.43□□□□□ -1.54
ATXN3-218ENST00000553309 GSTM5P46439 218 aa5.43□□□□□ -1.54
ATXN3-218ENST00000553309 CPA2P48052 419 aa5.43□□□□□ -1.54
ATXN3-218ENST00000553309 TERF1P54274 439 aa5.43□□□□□ -1.54
ATXN3-218ENST00000553309 CCL23P55773 120 aa5.43□□□□□ -1.54
ATXN3-218ENST00000553309 RPS13P62277 151 aaKnown RBP5.43□□□□□ -1.54
ATXN3-218ENST00000553309 GAB1Q13480 694 aa5.43□□□□□ -1.54
ATXN3-218ENST00000553309 MAPKAPK3Q16644 382 aa5.43□□□□□ -1.54
ATXN3-218ENST00000553309 LONRF1Q17RB8 773 aa5.43□□□□□ -1.54
ATXN3-218ENST00000553309 CCDC96Q2M329 555 aa5.43□□□□□ -1.54
ATXN3-218ENST00000553309 P3H1Q32P28 736 aa5.43□□□□□ -1.54
ATXN3-218ENST00000553309 HERC4Q5GLZ8 1057 aaPredicted RBP5.43□□□□□ -1.54
ATXN3-218ENST00000553309 CCDC144NLQ6NUI1 221 aa5.43□□□□□ -1.54
ATXN3-218ENST00000553309 DEF8Q6ZN54 512 aa5.43□□□□□ -1.54
ATXN3-218ENST00000553309 RINLQ6ZS11 566 aa5.43□□□□□ -1.54
ATXN3-218ENST00000553309 FAM84BQ96KN1 310 aaPredicted RBP5.43□□□□□ -1.54
ATXN3-218ENST00000553309 RXFP3Q9NSD7 469 aa5.43□□□□□ -1.54
ATXN3-218ENST00000553309 RBM28Q9NW13 759 aaKnown RBP5.43□□□□□ -1.54
ATXN3-218ENST00000553309 TRIOO75962 3097 aa5.43□□□□□ -1.54
ATXN3-218ENST00000553309 EP300Q09472 2414 aaPredicted RBP5.43□□□□□ -1.54
ATXN3-218ENST00000553309 RFX7Q2KHR2 1363 aa5.42□□□□□ -1.54
ATXN3-218ENST00000553309 ANKRD18BA2A2Z9 1011 aa5.42□□□□□ -1.54
ATXN3-218ENST00000553309 FAM234BA2RU67 622 aa5.42□□□□□ -1.54
ATXN3-218ENST00000553309 OR2W5A6NFC9 320 aa5.42□□□□□ -1.54
ATXN3-218ENST00000553309 DDTLA6NHG4 134 aaPredicted RBP5.42□□□□□ -1.54
ATXN3-218ENST00000553309 SOCS2O14508 198 aa5.42□□□□□ -1.54
ATXN3-218ENST00000553309 CNMDO75829 334 aa5.42□□□□□ -1.54
ATXN3-218ENST00000553309 PLAUP00749 431 aa5.42□□□□□ -1.54
ATXN3-218ENST00000553309 SLC3A2P08195 630 aaKnown RBP5.42□□□□□ -1.54
ATXN3-218ENST00000553309 TMEM191BP0C7N4 346 aa5.42□□□□□ -1.54
ATXN3-218ENST00000553309 AK2P54819 239 aa5.42□□□□□ -1.54
ATXN3-218ENST00000553309 LAMB3Q13751 1172 aa5.42□□□□□ -1.54
ATXN3-218ENST00000553309 ELF2Q15723 593 aa5.42□□□□□ -1.54
ATXN3-218ENST00000553309 TFAP2DQ7Z6R9 452 aa5.42□□□□□ -1.54
ATXN3-218ENST00000553309 ADHFE1Q8IWW8 467 aa5.42□□□□□ -1.54
ATXN3-218ENST00000553309 KIAA2013Q8IYS2 634 aa5.42□□□□□ -1.54
ATXN3-218ENST00000553309 FAM9BQ8IZU0 186 aa5.42□□□□□ -1.54
ATXN3-218ENST00000553309 CLASRPQ8N2M8 674 aaKnown RBP5.42□□□□□ -1.54
ATXN3-218ENST00000553309 NRACQ8N912 160 aa5.42□□□□□ -1.54
ATXN3-218ENST00000553309 PIGKQ92643 395 aa5.42□□□□□ -1.54
ATXN3-218ENST00000553309 AKAP1Q92667 903 aaKnown RBP eCLIP5.42□□□□□ -1.54
ATXN3-218ENST00000553309 CCDC138Q96M89 665 aa5.42□□□□□ -1.54
ATXN3-218ENST00000553309 EIF3CQ99613 913 aaKnown RBP5.42□□□□□ -1.54
ATXN3-218ENST00000553309 NUDT22Q9BRQ3 303 aa5.42□□□□□ -1.54
ATXN3-218ENST00000553309 UPF3BQ9BZI7 483 aaKnown RBP5.42□□□□□ -1.54
ATXN3-218ENST00000553309 TMEM8AQ9HCN3 771 aa5.42□□□□□ -1.54
ATXN3-218ENST00000553309 MLXIPLQ9NP71 852 aa5.42□□□□□ -1.54
ATXN3-218ENST00000553309 ASNSD1Q9NWL6 643 aa5.42□□□□□ -1.54
ATXN3-218ENST00000553309 CEP250Q9BV73 2442 aa5.42□□□□□ -1.54
ATXN3-218ENST00000553309 ZMYM2Q9UBW7 1377 aa5.42□□□□□ -1.54
ATXN3-218ENST00000553309 DNAH14Q0VDD8 3507 aa5.41□□□□□ -1.54
ATXN3-218ENST00000553309 FLNBO75369 2602 aaKnown RBP5.41□□□□□ -1.54
ATXN3-218ENST00000553309 CCDC187A0A096LP49 1063 aa5.41□□□□□ -1.54
ATXN3-218ENST00000553309 PRYO14603 147 aa5.41□□□□□ -1.54
ATXN3-218ENST00000553309 PDGFBP01127 241 aaPredicted RBP5.41□□□□□ -1.54
ATXN3-218ENST00000553309 HOXC6P09630 235 aa5.41□□□□□ -1.54
ATXN3-218ENST00000553309 EEF1GP26641 437 aaKnown RBP5.41□□□□□ -1.54
ATXN3-218ENST00000553309 CALRP27797 417 aaKnown RBP5.41□□□□□ -1.54
ATXN3-218ENST00000553309 AVPR2P30518 371 aa5.41□□□□□ -1.54
ATXN3-218ENST00000553309 HOXD12P35452 270 aa5.41□□□□□ -1.54
ATXN3-218ENST00000553309 NBL1P41271 181 aa5.41□□□□□ -1.54
ATXN3-218ENST00000553309 AGTR2P50052 363 aa5.41□□□□□ -1.54
ATXN3-218ENST00000553309 ACLYP53396 1101 aa5.41□□□□□ -1.54
ATXN3-218ENST00000553309 NSUN2Q08J23 767 aaKnown RBP eCLIP5.41□□□□□ -1.54
ATXN3-218ENST00000553309 PICALMQ13492 652 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms