RNA–Protein interactions for RNA: ENST00000553096.5

BEST3-212, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 2,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-212ENST00000553096 SENP6Q9GZR1 1112 aaPredicted RBP7.45□□□□□ -1.22
BEST3-212ENST00000553096 GOLGA2P5Q9HBQ8 144 aa7.45□□□□□ -1.22
BEST3-212ENST00000553096 RNF186Q9NXI6 227 aa7.45□□□□□ -1.22
BEST3-212ENST00000553096 RSL24D1Q9UHA3 163 aaKnown RBP7.45□□□□□ -1.22
BEST3-212ENST00000553096 SH3GLB1Q9Y371 365 aa7.45□□□□□ -1.22
BEST3-212ENST00000553096 PRSS51A0A1B0GVH4 220 aa7.45□□□□□ -1.22
BEST3-212ENST00000553096 SMIM35A0A1B0GVV1 85 aa7.45□□□□□ -1.22
BEST3-212ENST00000553096 TTC34A8MYJ7 566 aa7.45□□□□□ -1.22
BEST3-212ENST00000553096 CYP2C9P11712 490 aa7.45□□□□□ -1.22
BEST3-212ENST00000553096 ZNF23P17027 643 aa7.45□□□□□ -1.22
BEST3-212ENST00000553096 ME2P23368 584 aa7.45□□□□□ -1.22
BEST3-212ENST00000553096 CCNCP24863 283 aa7.45□□□□□ -1.22
BEST3-212ENST00000553096 PIK3R1P27986 724 aa7.45□□□□□ -1.22
BEST3-212ENST00000553096 S100A5P33763 92 aa7.45□□□□□ -1.22
BEST3-212ENST00000553096 TBX4P57082 545 aa7.45□□□□□ -1.22
BEST3-212ENST00000553096 SNX17Q15036 470 aa7.45□□□□□ -1.22
BEST3-212ENST00000553096 PCSK7Q16549 785 aa7.45□□□□□ -1.22
BEST3-212ENST00000553096 C9orf57Q5W0N0 161 aa7.45□□□□□ -1.22
BEST3-212ENST00000553096 CASC4Q6P4E1 433 aa7.45□□□□□ -1.22
BEST3-212ENST00000553096 CATSPER4Q7RTX7 472 aa7.45□□□□□ -1.22
BEST3-212ENST00000553096 NT5DC4Q86YG4 428 aa7.45□□□□□ -1.22
BEST3-212ENST00000553096 MPP5Q8N3R9 675 aa7.45□□□□□ -1.22
BEST3-212ENST00000553096 PHTF2Q8N3S3 785 aa7.45□□□□□ -1.22
BEST3-212ENST00000553096 CPSF7Q8N684 471 aaKnown RBP7.45□□□□□ -1.22
BEST3-212ENST00000553096 APPL2Q8NEU8 664 aa7.45□□□□□ -1.22
BEST3-212ENST00000553096 PCDH19Q8TAB3 1148 aa7.45□□□□□ -1.22
BEST3-212ENST00000553096 RDH11Q8TC12 318 aa7.45□□□□□ -1.22
BEST3-212ENST00000553096 CLEC4CQ8WTT0 213 aa7.45□□□□□ -1.22
BEST3-212ENST00000553096 TOP1MTQ969P6 601 aa7.45□□□□□ -1.22
BEST3-212ENST00000553096 NUF2Q9BZD4 464 aa7.45□□□□□ -1.22
BEST3-212ENST00000553096 ILKAPQ9H0C8 392 aaPredicted RBP7.45□□□□□ -1.22
BEST3-212ENST00000553096 KLK14Q9P0G3 267 aa7.45□□□□□ -1.22
BEST3-212ENST00000553096 VTI1BQ9UEU0 232 aa7.45□□□□□ -1.22
BEST3-212ENST00000553096 SNX9Q9Y5X1 595 aa7.45□□□□□ -1.22
BEST3-212ENST00000553096 NRCAMQ92823 1304 aa7.45□□□□□ -1.22
BEST3-212ENST00000553096 COL4A4P53420 1690 aaPredicted RBP7.45□□□□□ -1.22
BEST3-212ENST00000553096 MKI67P46013 3256 aaKnown RBP7.45□□□□□ -1.22
BEST3-212ENST00000553096 WDR27A2RRH5 827 aa7.45□□□□□ -1.22
BEST3-212ENST00000553096 RRN3P2A6NIE6 340 aa7.45□□□□□ -1.22
BEST3-212ENST00000553096 PRSS47A8MTI9 375 aa7.45□□□□□ -1.22
BEST3-212ENST00000553096 HOXA2O43364 376 aa7.45□□□□□ -1.22
BEST3-212ENST00000553096 TADA2AO75478 443 aa7.45□□□□□ -1.22
BEST3-212ENST00000553096 BCAS2O75934 225 aaPredicted RBP7.45□□□□□ -1.22
BEST3-212ENST00000553096 SORBS2O94875 1100 aaKnown RBP7.45□□□□□ -1.22
BEST3-212ENST00000553096 METTL18O95568 372 aa7.45□□□□□ -1.22
BEST3-212ENST00000553096 ATP6V1B1P15313 513 aa7.45□□□□□ -1.22
BEST3-212ENST00000553096 CD53P19397 219 aa7.45□□□□□ -1.22
BEST3-212ENST00000553096 CYP2F1P24903 491 aa7.45□□□□□ -1.22
BEST3-212ENST00000553096 HOXC8P31273 242 aa7.45□□□□□ -1.22
BEST3-212ENST00000553096 SDC4P31431 198 aa7.45□□□□□ -1.22
BEST3-212ENST00000553096 SPRP35270 261 aaPredicted RBP7.45□□□□□ -1.22
BEST3-212ENST00000553096 PPARGP37231 505 aaPredicted RBP7.45□□□□□ -1.22
BEST3-212ENST00000553096 MAGEA12P43365 314 aa7.45□□□□□ -1.22
BEST3-212ENST00000553096 PSEN2P49810 448 aa7.45□□□□□ -1.22
BEST3-212ENST00000553096 CDK9P50750 372 aaKnown RBP7.45□□□□□ -1.22
BEST3-212ENST00000553096 NUP107P57740 925 aa7.45□□□□□ -1.22
BEST3-212ENST00000553096 TUBA4AP68366 448 aa7.45□□□□□ -1.22
BEST3-212ENST00000553096 LPIN1Q14693 890 aa7.45□□□□□ -1.22
BEST3-212ENST00000553096 ZNF423Q2M1K9 1284 aa7.45□□□□□ -1.22
BEST3-212ENST00000553096 PIGGQ5H8A4 983 aa7.45□□□□□ -1.22
BEST3-212ENST00000553096 SPANXN3Q5MJ09 141 aa7.45□□□□□ -1.22
BEST3-212ENST00000553096 SCYL2Q6P3W7 929 aa7.45□□□□□ -1.22
BEST3-212ENST00000553096 DSELQ8IZU8 1212 aa7.45□□□□□ -1.22
BEST3-212ENST00000553096 C7orf31Q8N865 590 aa7.45□□□□□ -1.22
BEST3-212ENST00000553096 TDRD5Q8NAT2 981 aaKnown RBP7.45□□□□□ -1.22
BEST3-212ENST00000553096 TRPV1Q8NER1 839 aa7.45□□□□□ -1.22
BEST3-212ENST00000553096 GIPC2Q8TF65 315 aa7.45□□□□□ -1.22
BEST3-212ENST00000553096 PDCD6IPQ8WUM4 868 aaKnown RBP7.45□□□□□ -1.22
BEST3-212ENST00000553096 LENG8Q96PV6 779 aaPredicted RBP7.45□□□□□ -1.22
BEST3-212ENST00000553096 OSBPL11Q9BXB4 747 aa7.45□□□□□ -1.22
BEST3-212ENST00000553096 NT5C1AQ9BXI3 368 aa7.45□□□□□ -1.22
BEST3-212ENST00000553096 B3GNT5Q9BYG0 378 aa7.45□□□□□ -1.22
BEST3-212ENST00000553096 SLC2A11Q9BYW1 496 aa7.45□□□□□ -1.22
BEST3-212ENST00000553096 MAGEB5Q9BZ81 275 aa7.45□□□□□ -1.22
BEST3-212ENST00000553096 SHCBP1LQ9BZQ2 653 aa7.45□□□□□ -1.22
BEST3-212ENST00000553096 TMEM216Q9P0N5 145 aa7.45□□□□□ -1.22
BEST3-212ENST00000553096 ITGB1BP2Q9UKP3 347 aa7.45□□□□□ -1.22
BEST3-212ENST00000553096 ACAD8Q9UKU7 415 aa7.45□□□□□ -1.22
BEST3-212ENST00000553096 DERAQ9Y315 318 aa7.45□□□□□ -1.22
BEST3-212ENST00000553096 A0A0A0MRY4 1105 aa7.44□□□□□ -1.22
BEST3-212ENST00000553096 E9PBE3 544 aa7.44□□□□□ -1.22
BEST3-212ENST00000553096 PIRO00625 290 aa7.44□□□□□ -1.22
BEST3-212ENST00000553096 AIM2O14862 343 aa7.44□□□□□ -1.22
BEST3-212ENST00000553096 PAPSS1O43252 624 aaPredicted RBP7.44□□□□□ -1.22
BEST3-212ENST00000553096 ZBTB14O43829 449 aa7.44□□□□□ -1.22
BEST3-212ENST00000553096 KLHL41O60662 606 aa7.44□□□□□ -1.22
BEST3-212ENST00000553096 TRIM13O60858 407 aa7.44□□□□□ -1.22
BEST3-212ENST00000553096 ZNF254O75437 659 aa7.44□□□□□ -1.22
BEST3-212ENST00000553096 POLBP06746 335 aa7.44□□□□□ -1.22
BEST3-212ENST00000553096 CDH2P19022 906 aaPredicted RBP7.44□□□□□ -1.22
BEST3-212ENST00000553096 LMO2P25791 158 aa7.44□□□□□ -1.22
BEST3-212ENST00000553096 VARSP26640 1264 aaKnown RBP7.44□□□□□ -1.22
BEST3-212ENST00000553096 HADHAP40939 763 aa7.44□□□□□ -1.22
BEST3-212ENST00000553096 TSPAN7P41732 249 aa7.44□□□□□ -1.22
BEST3-212ENST00000553096 MRPS22P82650 360 aaKnown RBP7.44□□□□□ -1.22
BEST3-212ENST00000553096 COG7P83436 770 aa7.44□□□□□ -1.22
BEST3-212ENST00000553096 TXNL4AP83876 142 aaKnown RBP7.44□□□□□ -1.22
BEST3-212ENST00000553096 FRG1Q14331 258 aaKnown RBP7.44□□□□□ -1.22
BEST3-212ENST00000553096 SUZ12Q15022 739 aaKnown RBP7.44□□□□□ -1.22
BEST3-212ENST00000553096 CA9Q16790 459 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms