RNA–Protein interactions for RNA: ENST00000553011.5

PTCH1-226, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 1,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-226ENST00000553011 GSE1Q14687 1217 aa14.33□□□□□ -0.12
PTCH1-226ENST00000553011 CCDC6Q16204 474 aa14.33□□□□□ -0.12
PTCH1-226ENST00000553011 TAZQ16635 292 aa14.33□□□□□ -0.12
PTCH1-226ENST00000553011 IFI16Q16666 785 aaKnown RBP14.33□□□□□ -0.12
PTCH1-226ENST00000553011 MYLK3Q32MK0 819 aa14.33□□□□□ -0.12
PTCH1-226ENST00000553011 TMCO4Q5TGY1 634 aa14.33□□□□□ -0.12
PTCH1-226ENST00000553011 LYSMD4Q5XG99 296 aa14.33□□□□□ -0.12
PTCH1-226ENST00000553011 KAZNQ674X7 775 aa14.33□□□□□ -0.12
PTCH1-226ENST00000553011 NPNTQ6UXI9 565 aa14.33□□□□□ -0.12
PTCH1-226ENST00000553011 SPOCD1Q6ZMY3 1216 aa14.33□□□□□ -0.12
PTCH1-226ENST00000553011 CYP2U1Q7Z449 544 aa14.33□□□□□ -0.12
PTCH1-226ENST00000553011 NT5DC3Q86UY8 548 aa14.33□□□□□ -0.12
PTCH1-226ENST00000553011 TSEN2Q8NCE0 465 aaKnown RBP14.33□□□□□ -0.12
PTCH1-226ENST00000553011 ANP32BQ92688 251 aaKnown RBP14.33□□□□□ -0.12
PTCH1-226ENST00000553011 ZNF419Q96HQ0 510 aaPredicted RBP14.33□□□□□ -0.12
PTCH1-226ENST00000553011 CINPQ9BW66 212 aaPredicted RBP14.33□□□□□ -0.12
PTCH1-226ENST00000553011 MAK16Q9BXY0 300 aaKnown RBP14.33□□□□□ -0.12
PTCH1-226ENST00000553011 TSGA10Q9BZW7 698 aa14.33□□□□□ -0.12
PTCH1-226ENST00000553011 SMOC1Q9H4F8 434 aa14.33□□□□□ -0.12
PTCH1-226ENST00000553011 SGK2Q9HBY8 427 aa14.33□□□□□ -0.12
PTCH1-226ENST00000553011 DTLQ9NZJ0 730 aa14.33□□□□□ -0.12
PTCH1-226ENST00000553011 FZD4Q9ULV1 537 aa14.33□□□□□ -0.12
PTCH1-226ENST00000553011 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.33□□□□□ -0.12
PTCH1-226ENST00000553011 PCDHA3Q9Y5H8 950 aa14.33□□□□□ -0.12
PTCH1-226ENST00000553011 ATXN2Q99700 1313 aaKnown RBP14.33□□□□□ -0.12
PTCH1-226ENST00000553011 LRRK1Q38SD2 2015 aa14.32□□□□□ -0.12
PTCH1-226ENST00000553011 CABIN1Q9Y6J0 2220 aa14.32□□□□□ -0.12
PTCH1-226ENST00000553011 BCLAF3A2AJT9 711 aaKnown RBP14.32□□□□□ -0.12
PTCH1-226ENST00000553011 FAM47DPA6NHR8 397 aa14.32□□□□□ -0.12
PTCH1-226ENST00000553011 APOL1O14791 398 aa14.32□□□□□ -0.12
PTCH1-226ENST00000553011 MUSKO15146 869 aa14.32□□□□□ -0.12
PTCH1-226ENST00000553011 KRT86O43790 486 aa14.32□□□□□ -0.12
PTCH1-226ENST00000553011 NRDCO43847 1150 aa14.32□□□□□ -0.12
PTCH1-226ENST00000553011 GJB3O75712 270 aa14.32□□□□□ -0.12
PTCH1-226ENST00000553011 ZRANB2O95218 330 aaKnown RBP eCLIP14.32□□□□□ -0.12
PTCH1-226ENST00000553011 POP4O95707 220 aaKnown RBP14.32□□□□□ -0.12
PTCH1-226ENST00000553011 ITPKAP23677 461 aa14.32□□□□□ -0.12
PTCH1-226ENST00000553011 CTNNA2P26232 953 aa14.32□□□□□ -0.12
PTCH1-226ENST00000553011 MAOBP27338 520 aa14.32□□□□□ -0.12
PTCH1-226ENST00000553011 MPLP40238 635 aa14.32□□□□□ -0.12
PTCH1-226ENST00000553011 GARSP41250 739 aaKnown RBP14.32□□□□□ -0.12
PTCH1-226ENST00000553011 ADPRHP54922 357 aa14.32□□□□□ -0.12
PTCH1-226ENST00000553011 ADCY2Q08462 1091 aa14.32□□□□□ -0.12
PTCH1-226ENST00000553011 SPEM2Q0P670 501 aa14.32□□□□□ -0.12
PTCH1-226ENST00000553011 LBRQ14739 615 aaKnown RBP14.32□□□□□ -0.12
PTCH1-226ENST00000553011 SPDYCQ5MJ68 293 aa14.32□□□□□ -0.12
PTCH1-226ENST00000553011 AGBL4Q5VU57 503 aa14.32□□□□□ -0.12
PTCH1-226ENST00000553011 NCEH1Q6PIU2 408 aa14.32□□□□□ -0.12
PTCH1-226ENST00000553011 PEX26Q7Z412 305 aa14.32□□□□□ -0.12
PTCH1-226ENST00000553011 CCDC50Q8IVM0 306 aa14.32□□□□□ -0.12
PTCH1-226ENST00000553011 RCOR2Q8IZ40 523 aa14.32□□□□□ -0.12
PTCH1-226ENST00000553011 RNF10Q8N5U6 811 aaKnown RBP14.32□□□□□ -0.12
PTCH1-226ENST00000553011 OR14C36Q8NHC7 312 aa14.32□□□□□ -0.12
PTCH1-226ENST00000553011 EXD1Q8NHP7 514 aa14.32□□□□□ -0.12
PTCH1-226ENST00000553011 PIGKQ92643 395 aa14.32□□□□□ -0.12
PTCH1-226ENST00000553011 ALG3Q92685 438 aa14.32□□□□□ -0.12
PTCH1-226ENST00000553011 FAM131CQ96AQ9 280 aa14.32□□□□□ -0.12
PTCH1-226ENST00000553011 PDLIM2Q96JY6 352 aa14.32□□□□□ -0.12
PTCH1-226ENST00000553011 ZNF830Q96NB3 372 aaPredicted RBP14.32□□□□□ -0.12
PTCH1-226ENST00000553011 ZNF599Q96NL3 588 aa14.32□□□□□ -0.12
PTCH1-226ENST00000553011 PARD6AQ9NPB6 346 aa14.32□□□□□ -0.12
PTCH1-226ENST00000553011 AMFRQ9UKV5 643 aa14.32□□□□□ -0.12
PTCH1-226ENST00000553011 PACSIN2Q9UNF0 486 aaPredicted RBP14.32□□□□□ -0.12
PTCH1-226ENST00000553011 HEY1Q9Y5J3 304 aa14.32□□□□□ -0.12
PTCH1-226ENST00000553011 hCG_1818297A0A087WSY0 165 aa14.31□□□□□ -0.12
PTCH1-226ENST00000553011 CCDC66A2RUB6 948 aa14.31□□□□□ -0.12
PTCH1-226ENST00000553011 METTL12A8MUP2 240 aa14.31□□□□□ -0.12
PTCH1-226ENST00000553011 MEI4A8MW99 385 aa14.31□□□□□ -0.12
PTCH1-226ENST00000553011 UGT2B4P06133 528 aa14.31□□□□□ -0.12
PTCH1-226ENST00000553011 PTMAP06454 111 aaKnown RBP14.31□□□□□ -0.12
PTCH1-226ENST00000553011 PEX5P50542 639 aa14.31□□□□□ -0.12
PTCH1-226ENST00000553011 ZNF235Q14590 738 aa14.31□□□□□ -0.12
PTCH1-226ENST00000553011 RFTN1Q14699 578 aaPredicted RBP14.31□□□□□ -0.12
PTCH1-226ENST00000553011 TFDP3Q5H9I0 405 aa14.31□□□□□ -0.12
PTCH1-226ENST00000553011 PIP5KL1Q5T9C9 394 aa14.31□□□□□ -0.12
PTCH1-226ENST00000553011 DCAF12L1Q5VU92 463 aa14.31□□□□□ -0.12
PTCH1-226ENST00000553011 PARS2Q7L3T8 475 aaKnown RBP14.31□□□□□ -0.12
PTCH1-226ENST00000553011 SRLQ86TD4 932 aa14.31□□□□□ -0.12
PTCH1-226ENST00000553011 LRRC49Q8IUZ0 686 aa14.31□□□□□ -0.12
PTCH1-226ENST00000553011 SYCE1Q8N0S2 351 aa14.31□□□□□ -0.12
PTCH1-226ENST00000553011 PGBD5Q8N414 524 aa14.31□□□□□ -0.12
PTCH1-226ENST00000553011 CADM4Q8NFZ8 388 aa14.31□□□□□ -0.12
PTCH1-226ENST00000553011 FOXJ1Q92949 421 aa14.31□□□□□ -0.12
PTCH1-226ENST00000553011 RBM41Q96IZ5 413 aaKnown RBP14.31□□□□□ -0.12
PTCH1-226ENST00000553011 KLHL32Q96NJ5 620 aa14.31□□□□□ -0.12
PTCH1-226ENST00000553011 KCNF1Q9H3M0 494 aa14.31□□□□□ -0.12
PTCH1-226ENST00000553011 LZTFL1Q9NQ48 299 aa14.31□□□□□ -0.12
PTCH1-226ENST00000553011 DYRK4Q9NR20 520 aa14.31□□□□□ -0.12
PTCH1-226ENST00000553011 TMEM74BQ9NUR3 256 aa14.31□□□□□ -0.12
PTCH1-226ENST00000553011 SEPT3Q9UH03 358 aa14.31□□□□□ -0.12
PTCH1-226ENST00000553011 PPP2R2CQ9Y2T4 447 aa14.31□□□□□ -0.12
PTCH1-226ENST00000553011 PCDHGA5Q9Y5G8 931 aa14.31□□□□□ -0.12
PTCH1-226ENST00000553011 TTC24A2A3L6 582 aaPredicted RBP14.3□□□□□ -0.12
PTCH1-226ENST00000553011 LRRC72A6NJI9 287 aa14.3□□□□□ -0.12
PTCH1-226ENST00000553011 SLC7A4O43246 635 aa14.3□□□□□ -0.12
PTCH1-226ENST00000553011 PLRG1O43660 514 aaKnown RBP14.3□□□□□ -0.12
PTCH1-226ENST00000553011 CST8O60676 142 aa14.3□□□□□ -0.12
PTCH1-226ENST00000553011 FSBPO95073 299 aa14.3□□□□□ -0.12
PTCH1-226ENST00000553011 PIGNO95427 931 aa14.3□□□□□ -0.12
PTCH1-226ENST00000553011 PECAM1P16284 738 aaPredicted RBP14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms